Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02115 ATAAAACACAGAGATGAGTAAGCAAAATGCTTCACATGGAGATGTAATTTTAACGAAATCCCCACAGTTTCCTCTTTCATTCTTCTTCTGCAACATCCCACCAAGTGCCGTACCGCCATTTTAACTCGACTTCATCTTCAACCTCTCTCTCTCCCTCTCTCTTTCTCTCACCCTCCAATGGGTTCTCTCAACCCTATCCTCTCTCTCTCCACCTTAACCCTCTTCCTTTCCCTCCTCTCCGCCGCCGCAGACGACGCCGCTGTCATCCAGAAGCTCGCCGCCGCCGTCTCCCCGACCCCCACCGGCTGGTCCACCAACACCCCTTTCTGCAGCTGGAAAGAAATCCGCTGCGACTCTTCAAACAGAGTCACCTCCATTAACTTAGCTTCCAAATCTCTCTCCGGCGTCCTTCCTTCCGATCTCAACTCCCTCTCTCAGCTCACTTCTCTCTCTCTTCAACGCAACTCCTTCACCGGTCCAATCCCTTCCTTTGCTAATCTCTCTTTCCTTCAATCTCTTTATCTCGACAACAATAATTTCTCCTCTGTTTCTCCTGGTGCCTTCCAAGGCCTTACTAGCTTGCAGATTCTGAGTCTGACCCAGAATGTTAATCTTGCTTCTTGGTCCATTCCGACTGAGTTGACTCAGGCTTCTAGTTTGGTTAGTTTCTATGCTGGCAATGCCAACCTTGTTGGGTCTTTGCCGGATTTCTTCGATTCCTTTTCTAGTTTGCAGGAGCTTCGTCTTTCTTACAACAATCTTACTGGCGTTTTGCCCAAATCTCTCGGTGGATCTGGGATTAAGAGCTTGTGGTTGAACAATCAGCTAATTGGGTTGTCGGGTTCTATTGATTTGTTATCGTCTATGACTCAATTAGCTCAGGTTTGGCTTCAGAAGAATCAGTTCACAGGGCAGATTCCAGACTTTTCCAAGTGTGAAAGTTTGTTTGATCTTCAGCTTCGTGATAATCAGTTTACTGGGATTGTTCCTCCTTCTCTTATGAGCCTTTCTAGCTTGTCGAATGTTAGTTTGGATAACAATAAGCTTCAGGGGCCATTGCCTGTGTTTGATTCAAGAGTTCAGGCGACTTTTAGTAGTGTCAATAGGTTTTGTAAGACGACGCCAGGGCCGTGTGATGCTCAGGTTTCGGTGCTTCTTGCGGTTGCCGGGGCGTTTGGGTACCCGATTTCGCTGGCAGATGCTTGGGAAGGAAATAATGCTTGCCAGGATTGGAGCTTTGTGGTTTGTACTGTAGGGAAGGTTACTACTGTTAACTTCGCAAAGCAGCATTTGGTGGGAGTGATCTCTCCTGCATTTGGAAACTTGACGAGTTTGAAGAATTTGTATTTGAATGACAATAATTTGGTTGGCGAGATACCGGAGAGTTTGACGATGTTGTCACAACTTCAGAATCTCGATGTTTCGAACAACAATTTGAGTGGACAGATACCTAAGTTTGCTACAACAGTTCGCTTGATCACGAAGGGTAATCCTTTGCTTGGGACTAGTTTGAGCCCTGGAAATGGAGGACATGATGGTGGAGCTGGAGGTGGAAAGATTGATTCCAATGGCACCAACATTGATGGGAAAACTTCAGGATCTTCCAATGGATCCTCCGTTTCAGCTGGTGTGATTGTTGGTGTTGTCATTGCTGTCGTTGTTTTTGTTGCTATTTTTCTGTTTGTTGGCTTCAAATGTTATGTAAGCAACAGGCATAAGAAGTTTGGGAAAGTGAATAATCCTGAAAATGGCAAGGAGATTGTGAAGAGTGATGCAGGGAGTGGCTTGAACGGTTATGCTGGAGTTCCAAGTGAGCTGCAAAGCCAGAGTAGTGAGGATTTTAGCAATGATATTAATGTTTTCGAGGGCGGAAATGTGGCCATCTCGATACAAGTTTTGAAGCAGGTGACGAACAACTTTAGTGAGGATAATGTGTTGGGAAGGGGAGGATTTGGAGTTGTATACAAAGGAGAGTTACATGATGGTACTAAAATTGCTGTGAAAAGGATGGAATCTGGGGCAATGGGTACCAAAGGAATGAGTGAGTTTCAAGCGGAAATTGCTGTGCTTACCAAAGTTAGGCATAGACATTTGGTTGCTCTTTTGGGTTATTGCATCAATGGCAATGAGAGGTTATTGGTATATGAGTACATGCCTCAAGGGACATTGACTCAACATTTGTTTGATTGGCAAGAGAATGGTTATCCTCCTCTTACTTGGAAGCAAAGAATTACAATTGCTTTAGATGTGGCAAGAGGAGTAGAATATCTACATAGCTTAGCCCAACAAAGTTTCATTCATAGAGACTTGAAACCTTCTAATATACTTCTTAGTGATGACATGAGAGCTAAGGTTGCTGATTTTGGTTTGGTTCGAAATGCACCCGACGGAAAATACTCTGTAGAAACTCGATTGGCCGGAACGTTTGGCTATCTTGCTCCCGAATATGCAGCAACAGGAAGGGTGACGACGAAAGTCGATGTATATGCATTTGGAGTAGTTTTGATGGAAATCATCACAGGTCGAAAAGCATTGGATGACACAATGCCGGACGAGCGATCTCATCTGGTCACATGGTTCCGAAGAGTGTTGATCATGAAAGAGAACATTCCAAAAGCGATCGATCAAGCTCTCAACCCAGACGAGGAGAGCATGGAGAGCATATTAAAGGTGGCAGAGTTAGCAGGACACTGCACAGCTCGCGAGCCACATCAAAGACCTGACATGGGCCACGCTGTCAACATCCTTGGCCCTCTCGTCGAGCAATGGAAACCTACGAGCCAACACGAAGAAGAAACGGATGGGATCGATCTGCACATGAGCCTACCTCAAGCTCTTCAAAGATGGCAAGCAAATGAAGGAACATCCACAATGATGTTCAGTGACATTTCTTACTCCCAGACCCACACAAGCATTCCTTCAAAACCTTCAGGATTTGCTGACACATTTGACTCCATGGATTGCAGATAGACCAAAGGGAACAAAAACAAGATACCAAAATATCTCATAGAGCTGTTTGTTTTAGTGGATGTCACTGTTTTTAGTGCAATTCATTTGTCTCTTTGTTTGCTTCATTCTTTTATTAATGCCTAACGATGGAATTTTGCTGCATGTTCTTGGATTTTTAAGCCATTTCACTTTGTATGATAAGTATATATATATCTATATATAAA 3173 44.19 MGSLNPILSLSTLTLFLSLLSAAADDAAVIQKLAAAVSPTPTGWSTNTPFCSWKEIRCDSSNRVTSINLASKSLSGVLPSDLNSLSQLTSLSLQRNSFTGPIPSFANLSFLQSLYLDNNNFSSVSPGAFQGLTSLQILSLTQNVNLASWSIPTELTQASSLVSFYAGNANLVGSLPDFFDSFSSLQELRLSYNNLTGVLPKSLGGSGIKSLWLNNQLIGLSGSIDLLSSMTQLAQVWLQKNQFTGQIPDFSKCESLFDLQLRDNQFTGIVPPSLMSLSSLSNVSLDNNKLQGPLPVFDSRVQATFSSVNRFCKTTPGPCDAQVSVLLAVAGAFGYPISLADAWEGNNACQDWSFVVCTVGKVTTVNFAKQHLVGVISPAFGNLTSLKNLYLNDNNLVGEIPESLTMLSQLQNLDVSNNNLSGQIPKFATTVRLITKGNPLLGTSLSPGNGGHDGGAGGGKIDSNGTNIDGKTSGSSNGSSVSAGVIVGVVIAVVVFVAIFLFVGFKCYVSNRHKKFGKVNNPENGKEIVKSDAGSGLNGYAGVPSELQSQSSEDFSNDINVFEGGNVAISIQVLKQVTNNFSEDNVLGRGGFGVVYKGELHDGTKIAVKRMESGAMGTKGMSEFQAEIAVLTKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTQHLFDWQENGYPPLTWKQRITIALDVARGVEYLHSLAQQSFIHRDLKPSNILLSDDMRAKVADFGLVRNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMEIITGRKALDDTMPDERSHLVTWFRRVLIMKENIPKAIDQALNPDEESMESILKVAELAGHCTAREPHQRPDMGHAVNILGPLVEQWKPTSQHEEETDGIDLHMSLPQALQRWQANEGTSTMMFSDISYSQTHTSIPSKPSGFADTFDSMDCR 930
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 65893298 65896730 - XM_039018756.1 Bhi12g02115 53927

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02115 930 Gene3D Transferase(Phosphotransferase) domain 1 659 882 - -
Bhi12g02115 930 CDD STKc_IRAK 587 860 - -
Bhi12g02115 930 PANTHER OSJNBA0070M12.3 PROTEIN 14 930 - -
Bhi12g02115 930 Pfam Protein tyrosine and serine/threonine kinase 584 855 IPR001245 GO:0004672|GO:0006468
Bhi12g02115 930 Gene3D Ribonuclease Inhibitor 24 317 IPR032675 -
Bhi12g02115 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Bhi12g02115 930 Gene3D Ribonuclease Inhibitor 320 444 IPR032675 -
Bhi12g02115 930 SUPERFAMILY L domain-like 48 432 - -
Bhi12g02115 930 SMART serkin_6 581 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g02115 930 MobiDBLite consensus disorder prediction 442 479 - -
Bhi12g02115 930 MobiDBLite consensus disorder prediction 465 479 - -
Bhi12g02115 930 ProSitePatterns Protein kinases ATP-binding region signature. 587 609 IPR017441 GO:0005524
Bhi12g02115 930 SMART LRR_typ_2 383 406 IPR003591 -
Bhi12g02115 930 SMART LRR_typ_2 407 431 IPR003591 -
Bhi12g02115 930 SMART LRR_typ_2 182 205 IPR003591 -
Bhi12g02115 930 SMART LRR_typ_2 108 131 IPR003591 -
Bhi12g02115 930 SMART LRR_typ_2 85 107 IPR003591 -
Bhi12g02115 930 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 14 930 - -
Bhi12g02115 930 ProSiteProfiles Protein kinase domain profile. 581 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g02115 930 MobiDBLite consensus disorder prediction 908 930 - -
Bhi12g02115 930 Gene3D Phosphorylase Kinase; domain 1 542 658 - -
Bhi12g02115 930 SUPERFAMILY Protein kinase-like (PK-like) 564 857 IPR011009 -
Bhi12g02115 930 Pfam Leucine rich repeat 104 143 IPR001611 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02115 - - - csv:101213513 1627.07
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g01228 Bhi-Chr12:36343109 Bhi12g02115 Bhi-Chr12:65893298 0 dispersed
Bhi12g02115 Bhi-Chr12:65893298 Bhi01g01344 Bhi-Chr1:27008374 4.78E-06 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1059 . Blo12g00158 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone14ag0538 Cone15ag0562 Cone18ag0903 . . . . . . Blo07g00197 . . . . . Bma06g01485 . . . Cma08g00873 . . . . . Bhi12g02115 . . . . . Lcy13g0883 . . . . . . . Lsi09g01615 . . Cme11g02213
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004008 3 1 2 2 2 0 2 0 0 1 1 0 2 1 0 2 0 0 2 0 1 0 0 0 0 1 0 0 0 2 25
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88548 PF07714 PK_Tyr_Ser-Thr 1.40E-49 CL0016 Bhi PK