Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02119 GTTCTTATCATATCAACATGAAGACCACAACACCCCATCCCCACCGTGTCCTATTAGTAACATATTGCGCTCAAGGGCACATCAACCCTACCCTCCAATTCGCCAGGCGCCTCACCCGCCACGGCGACGTCCACGTCACCTTCCTCACCTCTCTCTCCGCCTACCGCCGCATTGGCCAAACCCCGACTCTCCCCCATCTCTCGTTCACCTCCTTCTCCGATGGCTACGACGACGGTTTCAAACCTGGTGACGACGTCAATCGTTTCATGTCAGAGCTCGAGCGTTGCGGTTCTGAAGCTTTGAAGAATATAATCGAGGAAAGTAGAAACAAAGGCCAACCCTTCACTTGTATTGTGTATTCCATACTCCTTCCTTGGGTGGCTACAGTGGCACGTTCCCTCGACATTCCGTCTGTTCTTCTTTGGATTCAACCGGCAGTCGTTTTCGCTTTGTATTACTATTACAACAATGGATATTACGACGAAATTCAAAGAATTATTTCTAGTGATGATCCTAATTCCATGAGTATTAAATTACCTGGGCTTCCATTGTTGAGTGCTCGTGACCTTCCATCATTTTTTGGGAGTTCAGATGTTTACGATTTTGCACTCCCAATATTTAGGAGGCAATTTGAATTACTAGAGGAAGAGAGCAATCCAAAGGTTTTAATCAACACGTTTGAGGAATTGGAGAAGGATGCAGTGAGAGCGATTAAGAAATTTCATTTGATGCCTATTGGGCCATTGATTCCATCCGCTTTTCTTGACGGACATGACCCATCAGAAGTCTCATCTGGATGTGATCTATTCCGATCTACTAGCAGTTATATCGACTGGTTGAATTCAAAACCTAAAGCATCCGTCATTTACGTATCATCGGGAAGCATTTCGACATTATCAAAGCAACAGAAAGAGGAGATAGCAAGAGGATTATTAAGCACAAAGCGACCATTTTTATGGGTTATCCGAGACATTGAAGAAGAAAAAGAAGATGCATTAAGCTTTAAAGAGAAACTAGAAACTCAAGGCAAGATAGTTTCATGGTGTTCCCAACTTGAGGTTCTATCAAGCCCAGCCACAGGCTGCTTTCTCACACACTGTGGTTGGAATTCTTGTTTGGAGAGTCTGGCTTGCGGCATTCCGACCGTGACGCTTCCACAATGGACCGATCAAGCGACCAATGCCAAGATTGTCCAGGACTTGTCGGAGACCGGAGTGAGGTTAAAGGTGGCGGAGGACGGCGTGGTTAAGGGAGAGGAGATAGAGAGGTGTTTGGAGTTGGTGATGGGAAATTCAGAGAAAGGGGAAGAAATAAGGAGGAATGCTATGAAATGGAAGAAGTTGGCTAGGGAAGCTACTAGTGAGGGTGGTTCATCATGTGCCAATTTAAAGGCTTTTGTGGATCAAGTTTGTTCTTAGATATTGATGATTTAAGGCCCTACCCATGCAAGAAAATTTCTTGTTTTAAAATAGTGTGGGGTTCGACTATATCTCAGATTTATTAATATTTACAAAGATAAATTTCTAGAGTGAATAAGGAGAATATAGTATTCAATGCA 1558 43.84 MKTTTPHPHRVLLVTYCAQGHINPTLQFARRLTRHGDVHVTFLTSLSAYRRIGQTPTLPHLSFTSFSDGYDDGFKPGDDVNRFMSELERCGSEALKNIIEESRNKGQPFTCIVYSILLPWVATVARSLDIPSVLLWIQPAVVFALYYYYNNGYYDEIQRIISSDDPNSMSIKLPGLPLLSARDLPSFFGSSDVYDFALPIFRRQFELLEEESNPKVLINTFEELEKDAVRAIKKFHLMPIGPLIPSAFLDGHDPSEVSSGCDLFRSTSSYIDWLNSKPKASVIYVSSGSISTLSKQQKEEIARGLLSTKRPFLWVIRDIEEEKEDALSFKEKLETQGKIVSWCSQLEVLSSPATGCFLTHCGWNSCLESLACGIPTVTLPQWTDQATNAKIVQDLSETGVRLKVAEDGVVKGEEIERCLELVMGNSEKGEEIRRNAMKWKKLAREATSEGGSSCANLKAFVDQVCS 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 65951892 65953760 - XM_039020078.1 Bhi12g02119 53931

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02119 466 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 273 427 IPR002213 GO:0008194
Bhi12g02119 466 Gene3D Glycogen Phosphorylase B; 258 445 - -
Bhi12g02119 466 PANTHER UDP-GLYCOSYLTRANSFERASE 75D1 9 463 - -
Bhi12g02119 466 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 464 - -
Bhi12g02119 466 CDD GT1_Gtf-like 10 463 IPR002213 GO:0008194
Bhi12g02119 466 Gene3D Glycogen Phosphorylase B; 14 457 - -
Bhi12g02119 466 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 9 463 - -
Bhi12g02119 466 ProSitePatterns UDP-glycosyltransferases signature. 342 385 IPR035595 -
Bhi12g02119 466 Coils Coil 316 336 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02119 - - - csv:101203309 802.357
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01167 Bhi-Chr1:22888445 Bhi12g02119 Bhi-Chr12:65951892 6.54E-130 dispersed
Bhi12g02111 Bhi-Chr12:65635053 Bhi12g02119 Bhi-Chr12:65951892 3.83E-157 dispersed
Bhi12g02119 Bhi-Chr12:65951892 Bhi12g02121 Bhi-Chr12:66071087 1.38E-132 dispersed
Bhi12g02118 Bhi-Chr12:65938450 Bhi12g02119 Bhi-Chr12:65951892 0 tandem
Bhi12g02119 Bhi-Chr12:65951892 Bhi12g02120 Bhi-Chr12:66011237 1.39E-141 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1051 . . . . . . . . Cmo08g00838 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bhi12g02119 . . . Hepe03g0632 . Lcy13g0892 Cla07g01594 Cam07g1691 Cec07g1787 Cco07g1749 Clacu07g1674 Cmu07g1641 Cre07g2015 Lsi09g01618 . . Cme11g02216
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002292 1 2 2 2 2 2 0 2 2 1 2 2 2 1 2 4 2 8 2 2 1 3 1 1 1 2 1 1 1 8 63