Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02120 TGATAATATGGAGATTACATCTTAATAAGGCTATTTTCTAAAAATTGAGTTGACAAATCAACCTCACCCCATACTTCTTATCTATAAAACATAACAAAAAGAAGAAACCCATTTAATCCCATGTTCTCAAAAGAGTGGTTTAGAAGAATGATGAGAAACCACCATCATTTTCTTATTGTATGTTTCCCTTCTCAAGGATACATTAATCCTTCCCTTCAACTTGCCAACCAACTCACAACCCTAAATATTGAAGTCACCTTTGCCACCACCATCGCCGCCGGCCGCCGTATGAACATAGTCCAACAAATCCCTTCACCATCAACCTTATCTTTCGCCACCTTCTCCGACGGTTTCGACAACGATGAAAATCTCAAAACCAACTACGACTTCGACCACTACGTCTCCGAGCTCAAACGCTGCGGCTCTCAATCGCTAATCGATCTCATCACTTCATCCAGCCACGGCCATCGCCGTCGTCCATTCACTTTTGTAATCTACAGCCTCCTTCTAAATTGGGCAGCTGATATTGCTACTTCTTTTAATATCCCTTCAGCTCTTTTCTCTGCTCAGCCTGCCACTGTTTTAGCTTTGTATTATTATTACTTTCATGGCTTCGGGGATGAAATTATCAACAAGCTCCAAATTAACAACCCCTCTTTGTCCATAGAATTACCAGGTTTGCCATTGTTTAAAATTCATGACATGCCTTCTTTTTTCTCTCCTTCTGGCCCACATGCATTTATTATTCCTCCAATGAGAGAACAAATGGAATTTCTTGGTCAACGAAAAAAGCCAACAACAGTTTTAGTCAACACATTTGATGCTTTGGAAAATGAAGCCTTGAGAGCAATTAATGAGTTGAAAATGGTAGCAATTGGACCTTTGATTAGTGAATTTCATGGGGATTTATTTCAAGTGTCAAATGAAGATAATTATATTGAATGGTTGAATTCAAAGGAAAATTCTTCAGTTGTTTATTTATCTTTTGGGTCAATTTGTGTGTTGTGTAAAGAACAAGAGGAAGAGATTTTGTATGGTTTAGAAGAAAGTGGGTATCCATTTTTGTGGGTAATGAGATCCAAAAAGGATGAAGAAGATGAGAAGAAATGGAAGGAATTAGTGGAAGGGAAAGGAAGAATTGTGAGTTGGTGTAGACAAATTGAAGTATTGAAACATCCTTCATTGGGTTGTTTTATTACACATTGTGGTTGGAATTCAACATTAGAAAGCTTGAGTTTTGGGGTGCCAATGGTGGGTTTTCCACAACAAATAGATCAACCTACTAATGCAAAGCTTGTAGAAGATGTGTGGAAGATGGGAGTGAGAGTGAAGGCTAATTCACAAGGAATTGTGGAGAGGGAAGAAATTAGGAGATGTTTGGATTTGGTAATGAAGAGGAAAGATGGAGAAAGGGAAGAGATTGAGAAGAATGTTAAAAAGTGGAAAGAAATGGCTTGGGAGGCTATCAATGAAGGTGGATCCTCAATTTTGAATCTTGTGAACTTTGTTGATGAGATTGATGTGGGTGATGCCTGAGTACTCCACCTTTTTATGATTGACATATGAGTTTTTTTTTTTTTTTCCTTTCAAGTTTTAGGATAATAAGAGGATCTGAATCATAGACCTCTTAGTCGTTAAAATATCTATATGCTAGTGAAACTATGTTTGTTTCGGTTATTTGATTGACAATGAGTTACAAGATGTCGACTATAATATATGTCAATTTTTAGTATCAAGATTTGGATTTCTTTCA 1753 37.19 MFSKEWFRRMMRNHHHFLIVCFPSQGYINPSLQLANQLTTLNIEVTFATTIAAGRRMNIVQQIPSPSTLSFATFSDGFDNDENLKTNYDFDHYVSELKRCGSQSLIDLITSSSHGHRRRPFTFVIYSLLLNWAADIATSFNIPSALFSAQPATVLALYYYYFHGFGDEIINKLQINNPSLSIELPGLPLFKIHDMPSFFSPSGPHAFIIPPMREQMEFLGQRKKPTTVLVNTFDALENEALRAINELKMVAIGPLISEFHGDLFQVSNEDNYIEWLNSKENSSVVYLSFGSICVLCKEQEEEILYGLEESGYPFLWVMRSKKDEEDEKKWKELVEGKGRIVSWCRQIEVLKHPSLGCFITHCGWNSTLESLSFGVPMVGFPQQIDQPTNAKLVEDVWKMGVRVKANSQGIVEREEIRRCLDLVMKRKDGEREEIEKNVKKWKEMAWEAINEGGSSILNLVNFVDEIDVGDA 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 66011237 66012989 + XM_039020156.1 Bhi12g02120 53932

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02120 471 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 273 402 IPR002213 GO:0008194
Bhi12g02120 471 Coils Coil 424 451 - -
Bhi12g02120 471 PANTHER UDP-GLYCOSYLTRANSFERASE 75D1 15 465 - -
Bhi12g02120 471 CDD GT1_Gtf-like 16 445 IPR002213 GO:0008194
Bhi12g02120 471 Gene3D Glycogen Phosphorylase B; 20 459 - -
Bhi12g02120 471 Gene3D Glycogen Phosphorylase B; 265 447 - -
Bhi12g02120 471 ProSitePatterns UDP-glycosyltransferases signature. 343 386 IPR035595 -
Bhi12g02120 471 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 13 464 - -
Bhi12g02120 471 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 15 465 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02120 - - - csv:101213749 761.14
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g02118 Bhi-Chr12:65938450 Bhi12g02120 Bhi-Chr12:66011237 6.27E-133 dispersed
Bhi12g02120 Bhi-Chr12:66011237 Bhi04g01448 Bhi-Chr4:36340146 2.58E-87 dispersed
Bhi12g02119 Bhi-Chr12:65951892 Bhi12g02120 Bhi-Chr12:66011237 1.39E-141 tandem
Bhi12g02120 Bhi-Chr12:66011237 Bhi12g02121 Bhi-Chr12:66071087 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1044 . . . . . Bpe14g01052 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bhi12g02120 . . . . . Lcy13g0893 . . . . . . . . . . Cme11g02217
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007278 0 2 0 0 0 1 0 1 1 2 1 1 2 2 2 2 1 0 1 1 2 1 1 2 0 2 2 1 2 0 33