Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02232 AATAGATTCCTACATCAATTCCAACGTCTCTCTGTCTCTCTCATTAGCTACATCTCAAGTTCAGCAGCAGTACCATTTCTCTGCTCTGCCTTTAATAATGGCTTCCAAATCTTTCTTGTGAAAGATCTCTTTTTTCTTTTCTTAGTGTAAATGCAGTCGAAGCTCCCTAAAGAAATTCAATGGGGAAGAAAGGAGGTAGCTCATGGTTGACTGCCGTCAAAAGGGCTTTCAGATCTCCCACTAAAGATGATGACGAAAAGAGGAGAGAGAAACGCCGATGGATTTTCAGAAAACCAACAAACCAGCCGCCGGAGCCACTCGCTGCCCACCAACCGCCGTCTAAACCACCGGCTCTGCCCACTGATTCTGTAGCTTTAGAAGATAAACATGCCCTTGCAGTGGCTGAAGCTGCCTTGGTTGCCGCCAGTGCGGCTGCACAAGCTGTCCACCTCACCCGGCCTGCCCGTCCTGGATTGGATCGCCATCGCCACGCCGCCATTGTGATTCAAACGGCCTTTAGAGGGTATCTGGCAAGGAGGGCTCTACGGGCATTGAAGGGGTTGGTGAAGTTGCAGGCATTAGTGAGAGGACACAATGTGAGGAAGCAAGCAAAGACAACGCTGCAATGCATGAAAGCATTAGTGAGAGTGCAGGAAAAAGTGCTGGATCACCGGATGCGACTTTCCCTCGAGGGTAGCCGACGGTCGACGTTTAGTGACACCAACAGCGTCTACGAATCTCGCTATGCTCAAGATGTCTCTGAAAGGAAGACTATTAAGTGTGTATCAAGAGAAGGAAGTAGCATTACAGAGGATTGGGATGAACGTACTCACACAGTTGAAGAAGTAAAGGCAATGTTACAACAAAGAAGAGACGCTGCTTTGAATCGTGACAACATTTTATCCCATTCCTTTTCTCAACAGATATGGAGAACTGGAAAGAGTCCATCGATAGGAAATCAAATGGAGCTTGAAGAAGGACAGAAATGGCTCGACCAATGGATGGCGAAGAAGCCATGGGAGAGCAGGGCAAGAGCTTCCACAGACCACAGACCACAGCCCCTTAAAACGCTCGAAATCGACACCTCTCGGCCCTACTCTTACTTATCTCCCAACAATCTCCACACGACGAATTACCAAACTCAATCATCACAAAGATCAAACTCGCTTTCCTCCTCCTCCCCACTCCACAGAGCCCATCACCACCAATTCTCCATCACCCCATCCCCGTCAAAATCTCGACCAGTCCAGCAAGTTCGGTCGGCAAGTCCTCGCTACAGCAGAGAAGATAGAAACCAATTCAGCCACCACATTACATCCCAAACGCCATGCTTGAGGTCAAAACATCAACATCAGAAAGGGGGTAGTGGTGGTGGGAGTTCAATGCCAAATTACATGGCAGCAACAGAGTCAGCCAAGGCACGAGTGCGGTCGCAAAGTGCGCCAAGGCAAAGGCCAGCAACACCCGAGCGGGAACGAATTGGGACTGCAAGGAAGCGGCTATCGTTTCCAGTACCACAAGATCCTTACGGTCGAATAGCGGGGTGTGGTGTTTATCAAAATAGCATGAAGAGCCCAAGTTTTAAAAGTGCTTGTGGAAGGTATAGTGGGTTGGAGGAACAGTCTAACTATTCTTCTTGCTATACAGAAAGCCATGGAGGAGAGGTTTCTCCATCTTCAACCACTGATCTCAGAAGATGGTTGAGATGATAAACATATGCACAAAGTTGAGCGATGAAATTTTAGAGAGGTTTTTGTACTTGATCATTTCAAAATGTAAACAGGCATCTATCTACTTTGTTTTTGGGGCAATCTAGATTTAGTTCTTGCATACATGAACATTGGTGTTCCCCAACAGCTTGTAAACATAAGATCCAAATTGAGCAGATGCATTAGCATTCAATTGAATAATTTCCTTTTTCCTTGATA 1928 46.84 MGKKGGSSWLTAVKRAFRSPTKDDDEKRREKRRWIFRKPTNQPPEPLAAHQPPSKPPALPTDSVALEDKHALAVAEAALVAASAAAQAVHLTRPARPGLDRHRHAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKTTLQCMKALVRVQEKVLDHRMRLSLEGSRRSTFSDTNSVYESRYAQDVSERKTIKCVSREGSSITEDWDERTHTVEEVKAMLQQRRDAALNRDNILSHSFSQQIWRTGKSPSIGNQMELEEGQKWLDQWMAKKPWESRARASTDHRPQPLKTLEIDTSRPYSYLSPNNLHTTNYQTQSSQRSNSLSSSSPLHRAHHHQFSITPSPSKSRPVQQVRSASPRYSREDRNQFSHHITSQTPCLRSKHQHQKGGSGGGSSMPNYMAATESAKARVRSQSAPRQRPATPERERIGTARKRLSFPVPQDPYGRIAGCGVYQNSMKSPSFKSACGRYSGLEEQSNYSSCYTESHGGEVSPSSTTDLRRWLR 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 71569888 71573340 + XM_039050558.1 Bhi12g02232 54044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02232 509 PANTHER IQ-DOMAIN 5-RELATED 1 509 - -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 281 437 - -
Bhi12g02232 509 Pfam Protein of unknown function (DUF4005) 363 465 IPR025064 -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 376 425 - -
Bhi12g02232 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 147 IPR027417 -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 281 297 - -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 45 59 - -
Bhi12g02232 509 SMART iq_5 124 145 IPR000048 GO:0005515
Bhi12g02232 509 SMART iq_5 101 123 IPR000048 GO:0005515
Bhi12g02232 509 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Bhi12g02232 509 MobiDBLite consensus disorder prediction 303 363 - -
Bhi12g02232 509 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Bhi12g02232 509 Gene3D - 99 155 - -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 17 38 - -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 483 509 - -
Bhi12g02232 509 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 509 - -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 1 61 - -
Bhi12g02232 509 Pfam IQ calmodulin-binding motif 103 123 IPR000048 GO:0005515
Bhi12g02232 509 Pfam IQ calmodulin-binding motif 129 145 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00618 Bhi-Chr1:11070067 Bhi12g02232 Bhi-Chr12:71569888 6.21E-154 dispersed
Bhi12g02232 Bhi-Chr12:71569888 Bhi06g00668 Bhi-Chr6:15674751 7.12E-43 dispersed
Bhi12g02232 Bhi-Chr12:71569888 Bhi12g02233 Bhi-Chr12:71569890 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02232 - - csv:101207978 873.618