Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02232 AATAGATTCCTACATCAATTCCAACGTCTCTCTGTCTCTCTCATTAGCTACATCTCAAGTTCAGCAGCAGTACCATTTCTCTGCTCTGCCTTTAATAATGGCTTCCAAATCTTTCTTGTGAAAGATCTCTTTTTTCTTTTCTTAGTGTAAATGCAGTCGAAGCTCCCTAAAGAAATTCAATGGGGAAGAAAGGAGGTAGCTCATGGTTGACTGCCGTCAAAAGGGCTTTCAGATCTCCCACTAAAGATGATGACGAAAAGAGGAGAGAGAAACGCCGATGGATTTTCAGAAAACCAACAAACCAGCCGCCGGAGCCACTCGCTGCCCACCAACCGCCGTCTAAACCACCGGCTCTGCCCACTGATTCTGTAGCTTTAGAAGATAAACATGCCCTTGCAGTGGCTGAAGCTGCCTTGGTTGCCGCCAGTGCGGCTGCACAAGCTGTCCACCTCACCCGGCCTGCCCGTCCTGGATTGGATCGCCATCGCCACGCCGCCATTGTGATTCAAACGGCCTTTAGAGGGTATCTGGCAAGGAGGGCTCTACGGGCATTGAAGGGGTTGGTGAAGTTGCAGGCATTAGTGAGAGGACACAATGTGAGGAAGCAAGCAAAGACAACGCTGCAATGCATGAAAGCATTAGTGAGAGTGCAGGAAAAAGTGCTGGATCACCGGATGCGACTTTCCCTCGAGGGTAGCCGACGGTCGACGTTTAGTGACACCAACAGCGTCTACGAATCTCGCTATGCTCAAGATGTCTCTGAAAGGAAGACTATTAAGTGTGTATCAAGAGAAGGAAGTAGCATTACAGAGGATTGGGATGAACGTACTCACACAGTTGAAGAAGTAAAGGCAATGTTACAACAAAGAAGAGACGCTGCTTTGAATCGTGACAACATTTTATCCCATTCCTTTTCTCAACAGATATGGAGAACTGGAAAGAGTCCATCGATAGGAAATCAAATGGAGCTTGAAGAAGGACAGAAATGGCTCGACCAATGGATGGCGAAGAAGCCATGGGAGAGCAGGGCAAGAGCTTCCACAGACCACAGACCACAGCCCCTTAAAACGCTCGAAATCGACACCTCTCGGCCCTACTCTTACTTATCTCCCAACAATCTCCACACGACGAATTACCAAACTCAATCATCACAAAGATCAAACTCGCTTTCCTCCTCCTCCCCACTCCACAGAGCCCATCACCACCAATTCTCCATCACCCCATCCCCGTCAAAATCTCGACCAGTCCAGCAAGTTCGGTCGGCAAGTCCTCGCTACAGCAGAGAAGATAGAAACCAATTCAGCCACCACATTACATCCCAAACGCCATGCTTGAGGTCAAAACATCAACATCAGAAAGGGGGTAGTGGTGGTGGGAGTTCAATGCCAAATTACATGGCAGCAACAGAGTCAGCCAAGGCACGAGTGCGGTCGCAAAGTGCGCCAAGGCAAAGGCCAGCAACACCCGAGCGGGAACGAATTGGGACTGCAAGGAAGCGGCTATCGTTTCCAGTACCACAAGATCCTTACGGTCGAATAGCGGGGTGTGGTGTTTATCAAAATAGCATGAAGAGCCCAAGTTTTAAAAGTGCTTGTGGAAGGTATAGTGGGTTGGAGGAACAGTCTAACTATTCTTCTTGCTATACAGAAAGCCATGGAGGAGAGGTTTCTCCATCTTCAACCACTGATCTCAGAAGATGGTTGAGATGATAAACATATGCACAAAGTTGAGCGATGAAATTTTAGAGAGGTTTTTGTACTTGATCATTTCAAAATGTAAACAGGCATCTATCTACTTTGTTTTTGGGGCAATCTAGATTTAGTTCTTGCATACATGAACATTGGTGTTCCCCAACAGCTTGTAAACATAAGATCCAAATTGAGCAGATGCATTAGCATTCAATTGAATAATTTCCTTTTTCCTTGATA 1928 46.84 MGKKGGSSWLTAVKRAFRSPTKDDDEKRREKRRWIFRKPTNQPPEPLAAHQPPSKPPALPTDSVALEDKHALAVAEAALVAASAAAQAVHLTRPARPGLDRHRHAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKTTLQCMKALVRVQEKVLDHRMRLSLEGSRRSTFSDTNSVYESRYAQDVSERKTIKCVSREGSSITEDWDERTHTVEEVKAMLQQRRDAALNRDNILSHSFSQQIWRTGKSPSIGNQMELEEGQKWLDQWMAKKPWESRARASTDHRPQPLKTLEIDTSRPYSYLSPNNLHTTNYQTQSSQRSNSLSSSSPLHRAHHHQFSITPSPSKSRPVQQVRSASPRYSREDRNQFSHHITSQTPCLRSKHQHQKGGSGGGSSMPNYMAATESAKARVRSQSAPRQRPATPERERIGTARKRLSFPVPQDPYGRIAGCGVYQNSMKSPSFKSACGRYSGLEEQSNYSSCYTESHGGEVSPSSTTDLRRWLR 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 71569888 71573340 + XM_039050558.1 Bhi12g02232 54044

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02232 509 PANTHER IQ-DOMAIN 5-RELATED 1 509 - -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 281 437 - -
Bhi12g02232 509 Pfam Protein of unknown function (DUF4005) 363 465 IPR025064 -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 376 425 - -
Bhi12g02232 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 147 IPR027417 -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 281 297 - -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 45 59 - -
Bhi12g02232 509 SMART iq_5 124 145 IPR000048 GO:0005515
Bhi12g02232 509 SMART iq_5 101 123 IPR000048 GO:0005515
Bhi12g02232 509 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Bhi12g02232 509 MobiDBLite consensus disorder prediction 303 363 - -
Bhi12g02232 509 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Bhi12g02232 509 Gene3D - 99 155 - -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 17 38 - -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 483 509 - -
Bhi12g02232 509 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 509 - -
Bhi12g02232 509 MobiDBLite consensus disorder prediction 1 61 - -
Bhi12g02232 509 Pfam IQ calmodulin-binding motif 103 123 IPR000048 GO:0005515
Bhi12g02232 509 Pfam IQ calmodulin-binding motif 129 145 IPR000048 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02232 - - - csv:101207978 873.618
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00618 Bhi-Chr1:11070067 Bhi12g02232 Bhi-Chr12:71569888 6.21E-154 dispersed
Bhi12g02232 Bhi-Chr12:71569888 Bhi06g00668 Bhi-Chr6:15674751 7.12E-43 dispersed
Bhi12g02232 Bhi-Chr12:71569888 Bhi12g02233 Bhi-Chr12:71569890 0 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi06g00669 . 1 479 IQD Protein Family AT3G52290 54.2 5.3e-102 369.0
Bhi06g00668 . 1 479 IQD Protein Family AT3G52290 54.2 5.3e-102 369.0
Bhi02g01384 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi02g01383 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi02g01385 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi09g03139 . 1 438 IQD Protein Family AT2G26180 61.6 9.3e-120 427.9
Bhi03g00330 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00327 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00326 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00329 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00328 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00324 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi03g00323 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi03g00325 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi01g03276 . 83 266 IQD Protein Family AT2G33990 53.5 1.6e-48 190.7
Bhi01g03276 . 86 259 IQD Protein Family AT3G15050 62.7 8.5e-55 211.5
Bhi03g00330 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00327 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00326 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00329 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00328 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00324 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00323 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00325 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi12g01121 . 124 476 IQD Protein Family AT5G13460 52.1 9.4e-78 288.5
Bhi12g02233 . 1 508 IQD Protein Family AT4G00820 51.3 2.8e-113 406.8
Bhi12g02232 . 1 509 IQD Protein Family AT4G00820 51.2 3.7e-113 406.4
Bhi01g00618 . 1 466 IQD Protein Family AT4G00820 50.5 1.1e-104 378.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002938 1 3 2 3 3 1 2 1 1 1 1 1 2 2 2 2 1 3 2 2 2 2 2 2 2 1 1 1 2 3 54