Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02235 ATAAAAGAAAAAACGAAAAAAAAAAAGAAAAGAAAAAACCATTTCTCCCTTCCGTATTGGAGAGACGCCCCTTTAATCAAGTTCACAACCACCCCCTCTTCAATTTCCCTTCTTCCGCCTACGAAATCCCGCCGGCCGCTCTCCGATGACCGTCGCCGCCCTGTATTCCGTCTCTTTCCGGCCTTGATTGCAGGTTTTAGGGTGGAGCGCCGGCCGGTTCGTCCCTTTTTTGGGAATCTGCGGCAATGAGTGCCGGCACGGCGACCTTCCGGTCTATACTCGACAAACCCCTCAACCAGTTGACGGAGGATGACATTTCACAGCTCACTCGAGAGGATTGTCGCAAATACCTAAAAGAAAAAGGAATGCGGCGGCCCTCATGGAACAAATCTCAGGCGATCCAGCAGGTTATTTCTCTCAAAGCATTACTTGAACCTTGTGATGATTCCGGCGCCGGTGCTCTCAGAAAGGTCGTCGTTTCGCCTCGGGTGAATTCAAATCAAGGCGATTCACCTAAAGAACCGAGTGATGATGCTCAGGTTACCATGTCAGTTGATGAATCTGCTTATAGCAATGTGGAGACTGCAAAATCTACTCCTGAGGATCCACCGGTTGAACCAGACAACAATGTCACCAGTCCCAGAGATCAATACGATACAAATGGAGTGGATGGCCAAATGACGATATTCTATTGTGGCAAGGTGAATGTGTATGATGGAGTTCCACCAGATAAGTCATCTAAGGATTTGCAGGCATGGGCAATCATGCATCTTGCAGCTAGTCCAATTCATTTCCCTCAGAATCATCCCTTAAGTGGAACTGCTCCATGTCAGTCTCCACCATGTCTTTTGCAGGCTTCCAGTGACAGAGATGACTTTTTCCCTCCTAGTGCTACCTTCCATCGAAATGTGCACACAGAGAAGATGGTTGAGCACCCTCAGCAGCAGCAGCAGCATGCAAAGGGAACCAGTACGCGAGATTCTGATGTTGAGGGTCAGGCGAGTCGGAAAGTTTCATTACAGAGATATCTTGAAAAGCGAAAAGACAGGATTGTCTTCTTCTAGCCTGGAGGGGTATATGAACCATCAAATGAGGACGCACGTATCCAATAAGAATTTAGGTCAGATTGTGACAAGTTCTTTATCCCCAACTGGAGTAGCAAAAGCCTTCGTTGGAACAGCTGACAATCAGCCAAAACTTGGATGTTTTCCTGTCG 1216 47.53 MSAGTATFRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKALLEPCDDSGAGALRKVVVSPRVNSNQGDSPKEPSDDAQVTMSVDESAYSNVETAKSTPEDPPVEPDNNVTSPRDQYDTNGVDGQMTIFYCGKVNVYDGVPPDKSSKDLQAWAIMHLAASPIHFPQNHPLSGTAPCQSPPCLLQASSDRDDFFPPSATFHRNVHTEKMVEHPQQQQQHAKGTSTRDSDVEGQASRKVSLQRYLEKRKDRIVFF 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 71709042 71713115 + XM_039050772.1 Bhi12g02235 54047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02235 272 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 3 269 - -
Bhi12g02235 272 Pfam tify domain 144 177 IPR010399 -
Bhi12g02235 272 MobiDBLite consensus disorder prediction 227 255 - -
Bhi12g02235 272 MobiDBLite consensus disorder prediction 109 138 - -
Bhi12g02235 272 SMART tify_2 138 179 IPR010399 -
Bhi12g02235 272 Pfam Jas motif 251 270 IPR018467 -
Bhi12g02235 272 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Bhi12g02235 272 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 3 269 IPR040390 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g02235 Bhi-Chr12:71709042 Bhi12g02237 Bhi-Chr12:71709043 0 dispersed
Bhi12g02235 Bhi-Chr12:71709042 Bhi12g02236 Bhi-Chr12:71709043 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2729 PF06200 tify 2.70E-10 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02235 - - bhj:120092625 549.666