Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02238 AAAAGAAAAAACGAAAAAAAAAAAGAAAAGAAAAAACCATTTCTCCCTTCCGTATTGGAGAGACGCCCCTTTAATCAAGTTCACAACCACCCCCTCTTCAATTTCCCTTCTTCCGCCTACGAAATCCCGCCGGCCGCTCTCCGATGACCGTCGCCGCCCTGTATTCCGTCTCTTTCCGGCCTTGATTGCAGGTTTTAGGGTGGAGCGCCGGCCGGTTCGTCCCTTTTTTGGGAATCTGCGGCAATGAGTGCCGGCACGGCGACCTTCCGGTCTATACTCGACAAACCCCTCAACCAGTTGACGGAGGATGACATTTCACAGCTCACTCGAGAGGATTGTCGCAAATACCTAAAAGAAAAAGGAATGCGGCGGCCCTCATGGAACAAATCTCAGGCGATCCAGCAGGTTATTTCTCTCAAAGCATTACTTGAACCTTGTGATGATTCCGGCGCCGGTGCTCTCAGAAAGGTCGTCGTTTCGCCTCGGGTGAATTCAAATCAAGGCGATTCACCTAAAGAACCGAGTGATGATGCTCAGGTTACCATGTCAGTTGATGAATCTGCTTATAGCAATGTGGAGACTGCAAAATCTACTCCTGAGGATCCACCGGTTGAACCAGACAACAATGTCACCAGTCCCAGAGATCAATACGATACAAATGGAGTGGATGGCCAAATGACGATATTCTATTGTGGCAAGGTGAATGTGTATGATGGAGTTCCACCAGATAAGTCATCTAAGGATTTGCAGGCATGGGCAATCATGCATCTTGCAGCTAGTCCAATTCATTTCCCTCAGAATCATCCCTTAAGTGGAACTGCTCCATGTCAGTCTCCACCATGTCTTTTGCAGGCTTCCAGTGACAGAGATGACTTTTTCCCTCCTAGTGCTACCTTCCATCGAAATGTGCACACAGAGAAGATGGTTGAGCACCCTCAGCAGCAGCAGCAGCATGCAAAGGGAACCAGTACGCGAGATTCTGATGTTGAGGGTCAGGCGAGTCGGAAAGTTTCATTACAGAGATATCTTGAAAAGCGAAAAGACAGGGGAAGGTTAAAGAACAAGAAAAATACAGGATTGTCTTCTTCTAGCCTGGAGGGGTATATGAACCATCAAATGAGGACGCACGTATCCAATAAGAATTTAGGTCAGATTGTGACAAGTTCTTTATCCCCAACTGGAGTAGCAAAAGCCTTCGTTGGAACAGCTGACAATCAGCCAAAACTTGGATGTTTTCCTGTCGACCTTAATGTCAAAGATATCCAGGAGTGCTGAGTTCAACGTCGTTGATGGCATGCTACTTCATAAATCATCCTTGTGATTGACAAGAACTTGAGGGAGAAGAGGAGCAAAGTCGATAAATGGTTATCCGTTGCATGATTTGGCTGCGTGAAGGAGCGGTTATGTAGGCCTTCATGAAGCAGTCATATTTTGGAGATCTTGCGTGGGAGAGGTGTCTATATCCAAATGGTATGAGTATCTCACTCAAGCTGATCAATTTTGTAACTCGAACACGGTGTCGCAACCGATGCTAGGATGATTAGGAACTTGTTCATGTTTCTGCTGTCAAGGCTTATTGGGTTGAGATGATGATGATGCAATGTTGGAGACGTCCAGTTCTCATGCATCATGTATAAAAAAATGTATGCTATCTTTTCTGTCCCAAGACCCTCTCTCTTTCTGTGTATACCAGATTCATATTTGCAAGTGCTGAGCATCCAACCTCACATGACATAACCAATGCTTCTATTCAGTCATT 1759 45.71 MSAGTATFRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKALLEPCDDSGAGALRKVVVSPRVNSNQGDSPKEPSDDAQVTMSVDESAYSNVETAKSTPEDPPVEPDNNVTSPRDQYDTNGVDGQMTIFYCGKVNVYDGVPPDKSSKDLQAWAIMHLAASPIHFPQNHPLSGTAPCQSPPCLLQASSDRDDFFPPSATFHRNVHTEKMVEHPQQQQQHAKGTSTRDSDVEGQASRKVSLQRYLEKRKDRGRLKNKKNTGLSSSSLEGYMNHQMRTHVSNKNLGQIVTSSLSPTGVAKAFVGTADNQPKLGCFPVDLNVKDIQEC 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 71709044 71714068 + XM_039050768.1 Bhi12g02238 54050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02238 343 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 3 311 - -
Bhi12g02238 343 MobiDBLite consensus disorder prediction 109 139 - -
Bhi12g02238 343 MobiDBLite consensus disorder prediction 227 286 - -
Bhi12g02238 343 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 3 311 IPR040390 -
Bhi12g02238 343 SMART tify_2 138 179 IPR010399 -
Bhi12g02238 343 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Bhi12g02238 343 Pfam tify domain 144 177 IPR010399 -
Bhi12g02238 343 Pfam Jas motif 251 268 IPR018467 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g02236 Bhi-Chr12:71709043 Bhi12g02238 Bhi-Chr12:71709044 0 dispersed
Bhi12g02237 Bhi-Chr12:71709043 Bhi12g02238 Bhi-Chr12:71709044 0 tandem
Bhi12g02238 Bhi-Chr12:71709044 Bhi12g02239 Bhi-Chr12:71709045 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2732 PF06200 tify 3.10E-10 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02238 - - bhj:120092625 699.893