Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02268 ACTCTTTTCTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCTCTTTTGTGATTTGTGTATGTGTGTGAGTGGAGCTCAATTTCCTCTCAAGTGTGTGTATTGAAATTTCAAGAATTTAATACCACCAAAAAAGTAAAAAGAATCAACTTGATATCCTTCCCCCAATTACTTATCCTTTTAGGGTTTACAAAAGCAACCAAAATAGATATGCTTCTTTTCTGATCCCCCCTCTCACCCTTCCAAACCCCAAAATTAATGAATTTTCACAAACAAGACATGGAATTTCTTACCAAAACAAGACAAGATCAAGATGAAGAAGAAGAAGATGAAGAAGAAGAAGAGGATCAAGATCAAGATCAAGATGAAGAAATCAAGAGTAGTATTGTTGCATGCAATTTCTTCCCAAATTCTCACTCCCAATTAACCCAACAACAAGATCAAGATCATGAAAGTGGAAATTATGAGTCTCAAAATGAAGATCATCAACCAATTCTCATGGATTTATCCTTAAGAATGGAAAGCAATGGCTTTGTTGATGTTGTAGAAAGAGAACACATGTTTGATAAAGTTGTTACTCCAAGTGATGTTGGCAAATTAAACCGTTTAGTTATCCCAAAACAACATGCTGAGAAATACTTCCCTTTAGATTCAACCACAAATGAGAAAGGCCTCATCTTAAACTTTGAAGACCGTCATGGAAAGCCTTGGCGCTTTCGTTACTCTTATTGGAATAGTAGCCAAAGCTATGTCATGACAAAAGGTTGGAGCCGTTTTGTTAAGGAGAAAAAACTCGACGCGGGCGACATCGTTTCCTTCCACCGAGCTCTCCCAAGTCATTCCGCTAATGATAACCGTCTTTTTATCGATTGGCGCCGTCGTCGCCCCGATGCTCCTGCTCCTCATCACCATCATCACCACCATTTCTCCAACCCTTTTCTCCTCCGTTGGGCTACAGCTCGTCACTTGCCACCACCACCTCCTCCGCGACGAATTACAACTCACAACCACCATCTTTACCCTCATTACGGGCTTGAAATCCCTAATTTTGGGATGTCTAATAACAATAATTCTTCCATGTATTATTTTAGACCTTTGTCGTCGTCATCGTCTTCTTCTTCATCTCTTTATAGGATGGGAAATGGGGATGAGATTGTTGTTAATAATCAAGGATGTTCTTCTATGGGGATTATTAACAAACCCGACTCCGGCGCTGCGAAACGGTTGAGACTCTTTGGAGTTAATATGGAGTGTGCTTCACCAGAGGTAGACGGAGGAGGAGGAAGAGAGGATGTGTCAAATGGCGGCGTTTCGAGAAGAGGGAAAGAACCCTTGTCGTTGAATTGGGATTTACTTTGATTCAAGAGACAAACGAGACTACAGAAACCAAAAGGAGGAAGAACAAACAAAAAAAGGTTTGGAAATTTTATATGGGAATCTTCCATTATATATGAATTTTTCTTTTTCTTTTTCTTTTTCTTTTTTCTTTTTTCTTTTTTTTTTTTAACACATTTTGCTGTCTAATTTTCACGAATATTGGAAGTTGAAGAAAAGGAAGATATTGAGATATATCAATCATCAAAATTGTTCATCTTTGTAGCCCTTTGAAGTTCATTTTATTCTAATTATTACTGAAA 1632 38.17 MNFHKQDMEFLTKTRQDQDEEEEDEEEEEDQDQDQDEEIKSSIVACNFFPNSHSQLTQQQDQDHESGNYESQNEDHQPILMDLSLRMESNGFVDVVEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSTTNEKGLILNFEDRHGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFHRALPSHSANDNRLFIDWRRRRPDAPAPHHHHHHHFSNPFLLRWATARHLPPPPPPRRITTHNHHLYPHYGLEIPNFGMSNNNNSSMYYFRPLSSSSSSSSSLYRMGNGDEIVVNNQGCSSMGIINKPDSGAAKRLRLFGVNMECASPEVDGGGGREDVSNGGVSRRGKEPLSLNWDLL 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 72711789 72713420 - XM_039019648.1 Bhi12g02268 54080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02268 366 MobiDBLite consensus disorder prediction 1 42 - -
Bhi12g02268 366 SUPERFAMILY DNA-binding pseudobarrel domain 99 190 IPR015300 -
Bhi12g02268 366 Coils Coil 8 35 - -
Bhi12g02268 366 Pfam B3 DNA binding domain 102 208 IPR003340 GO:0003677
Bhi12g02268 366 MobiDBLite consensus disorder prediction 18 36 - -
Bhi12g02268 366 MobiDBLite consensus disorder prediction 54 74 - -
Bhi12g02268 366 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 29 334 IPR044800 GO:0003700
Bhi12g02268 366 SMART B3_2 102 209 IPR003340 GO:0003677
Bhi12g02268 366 CDD B3_DNA 100 189 IPR003340 GO:0003677
Bhi12g02268 366 Gene3D - 95 223 IPR015300 -
Bhi12g02268 366 MobiDBLite consensus disorder prediction 1 17 - -
Bhi12g02268 366 ProSiteProfiles B3 DNA-binding domain profile. 102 209 IPR003340 GO:0003677
Bhi12g02268 366 MobiDBLite consensus disorder prediction 334 366 - -
Bhi12g02268 366 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 29 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02333 Bhi-Chr1:57165864 Bhi12g02268 Bhi-Chr12:72711789 7.33E-65 dispersed
Bhi01g02334 Bhi-Chr1:57165864 Bhi12g02268 Bhi-Chr12:72711789 7.33E-65 dispersed
Bhi12g00059 Bhi-Chr12:1680180 Bhi12g02268 Bhi-Chr12:72711789 1.03E-61 dispersed
Bhi12g02268 Bhi-Chr12:72711789 Bhi12g01357 Bhi-Chr12:41432376 5.25E-41 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2736 PF02362 B3 1.70E-28 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02268 - - bhj:120067991 659.448