Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02311 CCATCAGAAAATGGTAATGAAAAAGAAAAGAAAAAACTTCCATTATTAACTAATCTCTCATTTCATTCATTCTAAATCCCACCTTCGTTCTTCCTTCTCCTCATTTCTCTAATCTCAACCACCCAATTTCATCTCTCTGTTCATCCAATTTTTCAATCCCTTTCTTCCTTTTTTCTTCACATTTTCTCAATACCCTTTTCATTTCTTCCCCCAATTCGCCGATTTTAATGGCGGAATCCTCTTCCCCTTCAAAACCCATCATTACATTTTGATTCTCTTTCGATTTAATTAATACCCAGTTGCAGAGGTTTTGTTTATTGTAAGAAAAAATGGAGTTGGATGGCATCGAAGGTGTGCCATCCATGGATGTGATGGACGAGGAAGATAAGACCCTTCAACGTCACTGTCAGTTTCCTTCGATTTCCAAGCCTCGAATCCATAATAACGACAATCCCACAACCACAAGTGTCCATGAGCTTCTTGAATGTCCCGTTTGTACCAATTCTATGTATCCCCCAATTCATCAGTGTCCGAATGGGCATACCCTCTGTTCTTCATGTAAAACAAGGGTAGACAACCGTTGCCCGACTTGCAGACAAGAGCTCGGTGATATCAGATGTCTAGCATTAGAAAAAATAGCTGAATCACTTAAACTGGCTTGTAAATTCTGCACATTTGGGTGCCAGGAGATATTGCCTTACTACAGCAAACTCAAACACGAATCTGCCTGTTACTATAGACCATATATCTGTCCTTATGCTGGATCAGACTGCCCAGTTGATGGGGATATCCCTTTCCTTGTTTCTCATCTTCGGGACGATCACAAGGTTGACATGCATTCTGGATGCACGTTTAATCATCGTTATGTAAAGGCTAATCCGTGCGAAGTTGAAAACGCTACATGGATGCTAACCGTCTTCCACTGTTTTGGCCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTGGGTATGGCACCAGTTTACATGGCATTTCTCCGATTCATGGGAGACGAAACAGATGCCCGAAACTACAGTTACAGCCTCGAGGTCGGTGGAAATGGCAGGAAGCTGATATGGGAGGGCAATCCTCGAAGCATTCGGGACAACCACAAGAAAGTCAGAGACAGCCACGACGGCCTCATTATACAACGAAACATGGCGCTCTTCTTTTCGGGAGGAGAAAGGAAAGAGCTGAAGCTGCGGATTACGGGACGGATTTGGAAAGAACAAAATAAACAGTAAAATTGTTAGAGATTCAACTCTTATGTATGTGACTGTTATGCTGCATAACATTTGCTTCAACCTTTATCCAGCAGAAGCCAATCTTGAATCAGTTCATATTTATTTTCAAACTAACAAGAAAAGGCCTTAAAACCATTTCCAAGTCCAA 1392 41.59 MELDGIEGVPSMDVMDEEDKTLQRHCQFPSISKPRIHNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCQEILPYYSKLKHESACYYRPYICPYAGSDCPVDGDIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQNKQ 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 73828728 73831926 + XM_039020140.1 Bhi12g02311 54123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02311 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 160 IPR013083 -
Bhi12g02311 304 Pfam Seven in absentia protein family 95 294 IPR018121 GO:0005737|GO:0006511|GO:0007275
Bhi12g02311 304 ProSiteProfiles Zinc finger SIAH-type profile. 106 166 IPR013010 GO:0008270
Bhi12g02311 304 CDD Sina 167 295 - -
Bhi12g02311 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 96 IPR013083 -
Bhi12g02311 304 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 8 302 - -
Bhi12g02311 304 CDD RING-HC_SIAHs 51 89 - -
Bhi12g02311 304 ProSiteProfiles Zinc finger RING-type profile. 53 89 IPR001841 -
Bhi12g02311 304 PANTHER UBIQUITIN LIGASE SINAT3 8 302 - -
Bhi12g02311 304 SUPERFAMILY TRAF domain-like 106 298 - -
Bhi12g02311 304 SUPERFAMILY RING/U-box 47 93 - -
Bhi12g02311 304 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 161 294 IPR008974 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01487 Bhi-Chr1:30658282 Bhi12g02311 Bhi-Chr12:73828728 1.29E-180 dispersed
Bhi12g01261 Bhi-Chr12:37750462 Bhi12g02311 Bhi-Chr12:73828728 3.03E-24 dispersed
Bhi12g02311 Bhi-Chr12:73828728 Bhi03g02659 Bhi-Chr3:66206047 5.28E-159 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02311 K04506 - csv:101209363 643.654