Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02350 CCTGACTTGACTTCTTTTTAACTCAAAACCAACCCATGACTTCCCAACTCACAGTTTGGTGTAGTACCTCTTTCTGTTTTATTTCATACCATCCTTCTAATTTCTTGCATATTCTTTCATTTCTCACACTCAACCCTTTAATACAAACTCTTACCCCTTTCTTCCTTTTGCTCTCTATCTCCCCTCCTTTCTTGACATCGGCATCAGCATCGACATTGGTTTTGGTCTTGGCCTGTCTCCAAAGATATGGCCGGCTTGGTCACTGGTTCCCAACACTATCCCCACGTTGCCGATGAGAGTTTTTGTGGACCTCCACTATCCTCGAAAACATGTCGAGTTTGCAGTGATGAAATAGGACTTAAAGAGGATGGAAAAGTATTTGTTGCATGTCTTGTGTGCAATTTCCCTGTTTGCCGCCCTTGTTATGAGTATGAAAGGAGCGAAGGCAACAAGTGTTGTCCCCAGTGCAACACTCGCTACAAACGTCACAAAGGCTCATCCAGAGTGATTGGCGACGACGAAGAAGGTGACGATGCAGATGATTTTGATGACGAATTCCCCATTAAACACCACAACAATGACGAATTTCAAACAAAACAGCCTAATCATTCGGAAAACACTGGCTACAACGAACAGAATTGGCAAAGAAATGCACAGAATTCGTTCTCAGTTGCCGGAAGTGTGAATGGGAAAGATATGGATGGGGAGAAGGAAGGTTATGGAAGTGCAGAATGGAAGGAGAGAATTGATAAATGGAAAGTGAGGCAAGAGAAGAGAGGTTTGGGGAACAAAGAGGATGGAAGTAACAATGATCAAGAAGAAGATGACTACTTATTGGCAGAAGCCCGGCAGCCGCTATGGCGGAAACTTCCGATATCGTCAAGCAAAATCAGTCCATATCGTATAGTCATAGTCCTCCGCCTCGTAATTCTTGCGTTCTTCTTCCGCTTCCGAATCCTTACTCCGGCGTACGACGCCTTCCCCTTGTGGCTGATCTCCGTCATCTGTGAAATCTGGTTCGGCTTCTCCTGGATTCTCGATCAGTTCCCCAAATGGGCTCCAATCAACCGCGAAACCTACCTCGACCGCCTTTCCATGCGGTTCGAGCGCGACGGCGAGCCAAACCGCCTCGCACCGATCGACTTCTTCGTCAGCACGGTGGATCCTCTGAAAGAACCACCGATCATAACCGCCAACACCGTCCTCTCCATCCTCTCGGTCGACTATCCGGTGGATAAGGTGAGCTGCTACGTGTCGGACGATGGAGCGTCGATGCTGCTGTTCGACACGCTGGCGGAGACTGCGGAGTTTGCTCGGAGATGGGTGCCGTTTTGCAAGAAGTTCAGTGTCGAACCTAGGGCTCCGGAGTTTTACTTCTCACAGAAGATGGATTACTTGAAGGATAAGGTGTTGCCTAGCTTTGTGAAGGAGAGGAGGGCAATGAAGAGGGAATACGAAGAGTTCAAGGTGAGGATCAATGCGTTGGTGGCGAAGGCTCAGAAGAAACCAGAAGAGGGATGGGTTATGCAAGATGGGACTCCATGGCCTGGAAACCTTACCCGTGATCATCCTGGCATGATACAGGTGTATCTTGGAAGTGAAGGTGCACTTGATGTCGAAGGTAAAGAGTTGCCTCGTCTTGTATATGTTTCTCGTGAGAAACGCCCTGGATATCAACACCACAAGAAAGCTGGTGCTATGAATGCTCTTGTTCGAGTCTCTGCAGTCCTCACAAATGCACCATTCATCTTAAATCTGGATTGTGATCACTACGTCAACAATAGCAAAGCTGTAAGGGAAGCCATGTGCTTTCTAATGGACCCTCAGCTTGGAAAGAAACTTTGCTATGTTCAGTTTCCTCAAAGATTTGATGGTATTGATCGTCATGACAGATATGCTAATCGGAATATTGTGTTCTTTGATATCAACATGCGAGGACTAGATGGAATCCAAGGCCCAGTTTATGTTGGCACAGGATGTGTCTTCAACAGGCAGGCTTTATATGGATATGAACCACCAGTCTCCGAGAAAAGGCCAAAGATGACATGCGATTGCTGGCCTTCCTGGTGTTGCTGCTGCTGCGGTGGTTCGAGGAAATCGAAGTCCAAGAGGAAAGGAGAAAGAGGTTTGCTTGGAGGCCTGTTCAAGAAGAAGAAAATGATGGGGAAGAGTTATGTAAGGAAAGCGCCTGGACCAGTTTTTGATCTTGAAGAGATTGAAGAAGGGTTTGAAGGTTATGATGAGTTGGAGAAGTCATCACTCATGTCGCAAAAGAATTTTGAGAAAAGATTCGGACAGTCACCAGTTTTCATTGCGTCCACCCTTAAGGAAGATGGAGGTCTTCCAGAAGGGACTAACAGCACATCACTCGTTAAAGAAGCCATCCATGTGATAAGCTGTGGTTATGAAGAGAAAACAGAATGGGGAAAAGAGATAGGTTGGATTTATGGTTCTGTCACTGAGGATATTTTGACTGGATTCAAGATGCATTGTAGAGGATGGAAGTCAGTGTACTGCATGCCCCAGAGACCAGCTTTCAAGGGATCGGCCCCAATAAATCTTTCGGATCGTTTGCACCAAGTTTTGCGATGGGCTTTAGGTTCTGTTGAAATCTTCCTCAGCCGACACTGCCCGCTGTGGTATGCTTATGGAGGAAAGCTAAAATGGCTTGAGAGGCTTGCCTACATCAACACTATTGTTTACCCTTTTACTTCCATTCCATTGCTTGCTTACTGCACAATCCCTGCTGTCTGTCTTCTCACTGGAAAATTCATTATCCCCACTTTGACGAACTTGGCTAGCGTCTGGTTCATGGCCTTGTTTATTTCCATCATTGCGACGGCCGTGCTGGAGCTTCGATGGAGTGAAGTGAGTATTGAAGACTTGTGGCGTAATGAGCAATTCTGGGTGATTGGTGGTGTATCTGCACATCTTTTTGCAGTGTTCCAAGGCCTTCTCAAGGTCCTTGGTGGAGTAGACACGAACTTCACAGTTACAGCAAAAGCTGCTGAAGACACCGAGTTTGGAGAGCTCTATCTTTTCAAGTGGACAACCCTCCTTATCCCGCCGACCACTCTCATAATCTTGAACATGGTGGGAGTGGTTGCTGGAGTTTCAGATGCAATCAACAATGGCTATGGTTCATGGGGTCCTCTATTTGGAAAGCTGTTTTTTGCTTTCTGGGTCATTGTTCATCTCTATCCTTTCCTCAAGGGTCTGATGGGAAAACAAAACAGGACCCCCACCATTGTCGTCCTTTGGTCCGTGCTTCTCGCTTCTATATTTTCACTGGTTTGGGTGCGAATCGATCCCTTCCTGCCCAAGCAAACTGGTCCTGTCCTCAAACAATGTGGAGTTGATTGCTAGACATGCTCTGTGATGCTCCCCTTTTCACTTCGTTTTGTTGGGTTGCCTCATTCGTGTTCAAATGTTTGAAGTTGTGAGATATCTCTGTAGCCTTTTGTTGTTTGAATGAATATACAAGAACATAATGAACTTCACTTTCAGCAGTA 3512 46.27 MAGLVTGSQHYPHVADESFCGPPLSSKTCRVCSDEIGLKEDGKVFVACLVCNFPVCRPCYEYERSEGNKCCPQCNTRYKRHKGSSRVIGDDEEGDDADDFDDEFPIKHHNNDEFQTKQPNHSENTGYNEQNWQRNAQNSFSVAGSVNGKDMDGEKEGYGSAEWKERIDKWKVRQEKRGLGNKEDGSNNDQEEDDYLLAEARQPLWRKLPISSSKISPYRIVIVLRLVILAFFFRFRILTPAYDAFPLWLISVICEIWFGFSWILDQFPKWAPINRETYLDRLSMRFERDGEPNRLAPIDFFVSTVDPLKEPPIITANTVLSILSVDYPVDKVSCYVSDDGASMLLFDTLAETAEFARRWVPFCKKFSVEPRAPEFYFSQKMDYLKDKVLPSFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNLTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRQALYGYEPPVSEKRPKMTCDCWPSWCCCCCGGSRKSKSKRKGERGLLGGLFKKKKMMGKSYVRKAPGPVFDLEEIEEGFEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLVKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPQRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIIATAVLELRWSEVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTAKAAEDTEFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSVLLASIFSLVWVRIDPFLPKQTGPVLKQCGVDC 1039
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 74576499 74584475 + XM_039018869.1 Bhi12g02350 54162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02350 1039 Pfam Cellulose synthase 298 1032 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bhi12g02350 1039 MobiDBLite consensus disorder prediction 84 128 - -
Bhi12g02350 1039 CDD mRING-HC-C4C4_CesA_plant 27 77 - -
Bhi12g02350 1039 SUPERFAMILY Nucleotide-diphospho-sugar transferases 311 850 IPR029044 -
Bhi12g02350 1039 Coils Coil 396 416 - -
Bhi12g02350 1039 Pfam Zinc-binding RING-finger 24 95 IPR027934 -
Bhi12g02350 1039 MobiDBLite consensus disorder prediction 101 116 - -
Bhi12g02350 1039 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 102 IPR013083 -
Bhi12g02350 1039 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 154 1039 - -
Bhi12g02350 1039 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 24 114 - -
Bhi12g02350 1039 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 404 590 IPR029044 -
Bhi12g02350 1039 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 154 1039 - -
Bhi12g02350 1039 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 24 114 - -
Bhi12g02350 1039 SUPERFAMILY RING/U-box 24 99 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g02161 Bhi-Chr8:61959191 Bhi12g02350 Bhi-Chr12:74576499 0 dispersed
Bhi08g02162 Bhi-Chr8:61959191 Bhi12g02350 Bhi-Chr12:74576499 0 dispersed
Bhi09g02259 Bhi-Chr9:63373706 Bhi12g02350 Bhi-Chr12:74576499 2.62E-24 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02350 K10999 - csv:101205733 1978.37