Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02377 CAACTCAACTATCGGTTTTTATTTTGAGCCAAACGCCGCCTTAAAAGAGCCACGACGCGACACGAACTGATTCTCATTCTCACATCAGTCTGTCTCGTCTCTCCCGTGTATAGTCGGTACTCCCTCCCCAATTTGCTTACCAGTTGCAATCTTCAATCTCCCTCGGGTTGAATTTTACCCGTCCGAAGTTCCATTACCTGCTCCGCCTGCTTCTTTTCTCTTCTGCTTTCTTTCGAATTGTAGCCTGGACCAAGAAACTACCTCCCCATCTTTGGAATTTCCAAGTCCAAATGAGCAATAACATGGGGCGTTTCCTAGTTGCTGGGCTCTGTTTATGGTTCTCTCTGACATTGGTGATTGCAGATGCAAATGACTCTTCTTTGGGAGGTTTAATCTGGTCGTCTGCAAAAGAAGAGAGCGATCTCCTTATCGAGCACAGGCCCCAGGAAGATTCCGCCGACGCTGATGGCTTTGATGGCGGCTTTCCTTCCCTCGATAGCATGTTACAGTGGGCTATAGGCCATTCTGATCCTGCAAAACTAAAGGATACTGCACAGGATGTGAAACGATTGTCTCCAAGTGAAATAAAGAAGCGTCAAGAAGAAATTAAGGACCTAATAGAGGAGTTGAAGGTGCCATCAGATGCAAAGCTGATGCAAATTGCGATAGATGACTTGAAAAATTCCTCTCTATCATTGGAAGATCACCATCGGGCACTACAGGAGCTTTTAGAACTCGTTGAGCCAATAGACAATGCAAATGATTTGGACAAACTTGGGGGCCTTGCTGTGCTTATTCATGAGCTTAATCATTTCGATCCTGATGTGAGGAAAATTGCAGCGTGGATTCTTGGAAAAGCAAGTCAGAATAACCCTATTGTTCAAAAGCAGGTATTGGAACATGGGGCACTAGCAAAATTAGTAACGATGGTAAAATCTGATTTTGTAGAAGAAGCCATCAAGGCATTATATGCTATTTCATCGTTGGTTCAAAATAATTTATCTGGCCAGGAATTATTTTATGCCGAAGCTGGAGAAACTATGCTTCAGGATATTCTAAGCAATTCGAGCAGGGATATCAGATTGCAAAAGAAAGCTGTGTTTCTTGCAAGTGATTTGGCTATGACACAACTAGAAAAAACAGATGAAGCTCAAAGGCCATTTTTCGGAGATCGCCTTTTCTTGAAGTCTGTGGTTGATCTCATCCATTCGACAGACGTTGATCTCCAGGAGAAGGCCCTCATTGCTCTAAAGAACCTCCTGCTTCTAAGAACAACAAAAGCTCAAGTTTTAAGAGAATTTTGTGGGTTGGATGTTGCTTTGGAGAGGATGAGGGTGAAGCTGGAGGTATTAATGGAAGACGACGATCACCGAGATTATGCAATGGATGTGGAAGATCTACGAAGCCAAGTAGAGCTAATTTTCCTTCAAAAGCTGGGAAAGAGGATGCAGGTTCCAACATGAACAGGACTACAGTAGGATGATATTAGCTGCAGCTTTGAAGTTTGTCATATACAATGCTTCCTTACTAACCTAGGCTGTTTCGATGTGTTTACCCAGTAGAAAGAGATACATACTACTAGGAAGTTGAAAGAATGAAGAATTTTGTGTGGTGTATAGAAATTTGGTAGAATATTATTCACAACTAACTATTTATTATTGAATAAAACTAAAGATTATTAAGGAAAA 1688 41.82 MSNNMGRFLVAGLCLWFSLTLVIADANDSSLGGLIWSSAKEESDLLIEHRPQEDSADADGFDGGFPSLDSMLQWAIGHSDPAKLKDTAQDVKRLSPSEIKKRQEEIKDLIEELKVPSDAKLMQIAIDDLKNSSLSLEDHHRALQELLELVEPIDNANDLDKLGGLAVLIHELNHFDPDVRKIAAWILGKASQNNPIVQKQVLEHGALAKLVTMVKSDFVEEAIKALYAISSLVQNNLSGQELFYAEAGETMLQDILSNSSRDIRLQKKAVFLASDLAMTQLEKTDEAQRPFFGDRLFLKSVVDLIHSTDVDLQEKALIALKNLLLLRTTKAQVLREFCGLDVALERMRVKLEVLMEDDDHRDYAMDVEDLRSQVELIFLQKLGKRMQVPT 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 75049755 75055120 - XM_039050781.1 Bhi12g02377 54189

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02377 390 Pfam Nucleotide exchange factor Fes1 68 159 IPR013918 -
Bhi12g02377 390 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 24 387 - -
Bhi12g02377 390 SUPERFAMILY ARM repeat 107 338 IPR016024 -
Bhi12g02377 390 PANTHER PROTEIN FOLDING REGULATOR 24 387 - -
Bhi12g02377 390 SMART arm_5 285 325 IPR000225 GO:0005515
Bhi12g02377 390 SMART arm_5 152 192 IPR000225 GO:0005515
Bhi12g02377 390 SMART arm_5 193 231 IPR000225 GO:0005515
Bhi12g02377 390 Gene3D - 100 381 IPR011989 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02377 K09562 HSPBP1, FES1; hsp70-interacting protein - csv:105434386 654.055
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02016 Bhi-Chr3:43239101 Bhi12g02377 Bhi-Chr12:75049755 2.85E-18 dispersed
Bhi03g02017 Bhi-Chr3:43239189 Bhi12g02377 Bhi-Chr12:75049755 2.85E-18 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1395 . . . . . . . . . . . . . . . . . . . . . . . . Cla06g00149 Cam06g0065 Cec06g0165 Cco06g0159 Clacu06g0160 Cmu06g0157 Cre06g0931 . . . . . . Chy11g01847 . . . . . . . . . Sed09g0354 . . . . . . . . Bhi12g02377 Tan06g1429 Cmetu11g2072 . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0014136 1 1 0 1 1 1 1 0 0 1 0 0 0 1 1 1 0 1 0 1 1 1 1 1 1 0 1 3 1 1 23