Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02417 TAGCTGTTCTGACCACCCAAACACAAACCCTCCCCTTACCCTTTTCCTTCTCTCTTCACACACACAGCTTCTCTCTCTCTCTTCTTTCTCTCTCTTCTCTCCCTCTCTGCAACAGTTTCACCATTCTCCCAAACCCCTAGATTTTCTCACACAAACCTTCTCTTCTCTTCTCTTCAGCTTCTCTCTGCAAATCACTTCGTTCCCCCCTCCTCCATCTCTCTATCTCCACAGCACAAATCCGGCCTTTGCTTTCGATCTCCGACTCTATTCATCCGTCTCCCATGGCCGACGGCAAGTTCGATCTCCCTGACGATCTTCTTTCCTCCCGCCCTTCCGATCACTCCTGGACGCCCAAAGTGGAAGCTTCTGGAGGGAATGAAGAGGAGAAGGTGCTCTCGACCTTCCTTGATGAGTCGAAAGACCCAGTGGCTTCAGAGAACAGCATACCTTTGTCCCCTCAATGGCTATATGCTAAACCAAGTGAAATTAAGGAAGTGCGTGCTCCAACACCAGTGTCCCTTGCTAACTCAACTGATCTCAATCAGAAAGAGGGTTGGCGCCCTGATGGGTCCGAGGACAAGAAGGATTGGAGGAAGAGTACTTCTGAAAATGAAAGTGGCCGCCGTTGGCGAGAGGAAGAGCGAGAAACTGGCTTACTTGGTGGTCGCCGCAGGAAAACTGAGCGCCGCATCGATAACATGCCAACTAAGGAGACAATGGAGGGTAGAGTTCTGCCTAACTCGGACAGATGGCATGATGGGCGCATTTCTGGACATGATAGTCGCACTTCTAGTCATGACAGTCGTACTTCTGGGCATGATAGTCGTACTTCTAGTCATGATGCACGACGTGACAACAAATGGACGTTGAGATGGGGACCAGATGACAAGGAAAAGGAATCACGGATGGACAAACGATCAGATGCTGACAAGGAAGATGTTCGCAATGACAGTCAATCAGTGAGTGGCAATCGCCCTGCTTCCGAGCGTGACTCTGAATCGCGTGATAAATGGAGGCCTCGCCATAGGATGGAAAGCCATTCTGTTGGCTCAACTTCTTCTCGTGCTGCACCTGGTTTTTCACTTGAGAGAGGGCGGGGAGATGGGGGGTCTAATTTAGGATTTACAATTGGAAGAGGAAGGGGAAATACTATTGGGAGATCATCTACTGGTCTCATTGGAGTTCCACACTTGGATAAGATCGAAAATATTCCTGGGAAACCAAGATACTCATCTCATGCTTTTTGTTATCCTAGGGGTAAGCTTCTCGACATATATCGGAGGCAGAAATCTGATCCATCGTTCTCAGATCTGCCTGATGATATGGAAGAATTGCAGCATGTGACTCAACGTAGTGTTGTAGAACCATTGGCTTTTGTTTCTCCGGATGCTGAAGAGGAGACTACCCTTGGTGACATATGGAAGGGGAAAATCACCAGTAGCGGGGTTGTTTACAATTCACATAAGAAAGGGAAGCTAGCTGAATGTGTTTTAGGAGATGTAGACTCCATAGATGGATGTCAGACTGTTCTGGATTCAACTTTAGAGTCCGAGAATGTAGCAGCAACTCCGATTGAAGATAATGCTAATGTGAGTCATGAAGTTACAAATGATGAAGCATGCCAAGATGCTAATGACAGGAGCATTTGGAGTCAGACCTCAATTAGAGATGTCCTAGATGGAAAATATTTCAGCCATAAGGAAGAGGAAAAAAGGTCTAGTGCCATTTCTATGCCAAACTCTGGTGGATTGGCCCACACAATTTCTACAGTAGCCTCCCAACGTGTGATGGAGATTGGTGGTGGACACCCTGGTACTCAGCTAAATGTTGGTGTGAATGGGCGAGCAGATTCTGATTATAAAAGGCCTCATAACTTTGATGAAATTGAGTCCGCCAATTCGTTTGATGTCAGATCCAAGCTTTCTGATGACCCTAGTTCTATCTTCTTTATTCCTTTCTCTGAGCAAAATCCAAATAAAAGTTCTGATGTGAAATCTGAGGAGTTGAGTTTGTTCTATCTTGATCCTCAAGGGGTTATACAGGGGCCTTTTATTGGGGCTGACATCATCTTGTGGTATGAACAAGGATTCTTTGGGTTGGACCTGCCTGTTCGGTTGGCAGATGCCCCTGAGTCCCCATTCTGTGAGTTGGGGGAGGTTATGCCACATTTGAAAGTTAGAGAGGGAAGTGTTGATTGTGCTGATACAAAATCTCTTTCGGGCCAGTCTGGTGCCTCAGGAGGAATACTGGAGACGAATTTACCTTCTAAGCATCCAGCTCTTGATATGAATGATGCATCCACAACAAATGAAGTTCATCGGTCACTCGCTGAATTACATAGCCTTTCCAATCAACACATTTCATCTGGGATGCCCGAGACTGAAGCACCATTTCAATTGCATTCCAAGGGTCAAAGCTTTCATGATGTTGTTGCTCAGGATGAAGAAATTGTGTTTTCTGGAAGACCTGGCAACGATGGTTACCAATTTCCAAACACTTCTGGGGTATTGCCTATGGTGAATTCTATCAACCAACCTTCTCTTTTGAATGAGTTAACTGATCGCAGTGTGCCTGTTCAGAATGAAAATAAGTTGCACCCTTTTGGATTGCTGTGGTCTGAGCTGGAAGGTACAAATATGAAACCAGTTGAAGTCACCAATTCAAAACATACGAAGTTAGTTAACATGCCTTCAAACATGGTAAGAACCGCACCATTAGTTGGGAAGCCGGAAGCATCTCTTAATGCAGAGACTTGGCTTGATGTTTACAGAAGAAGTATGCATTCTGACCAGAGTGTATACCAGGATGCAAATGTTCCTCGTTCCTTGCCACATATAGAACAAGAATCTAATAGGTTTGATTTGGCAGATCAACTCATGTCTCATCAATATCATCAGGCACTTCAACAGCGGAATTTGTTGTCTCACTCTAGTGAAGCTACTTTAGATCATCATATGCAACAGCAGAATCTTATTCACCAGCAGCAGCTGTTGGCTAATAGAAGTACACCCGATCTTGATCATTTCTTGAACTTGCAGATGCAACAGCAACAGCAACGGCAGCTGCAGTTACAGCATCAATTACAGCAGCAGCAGTTGCAGCAGCAGCAAAAGCTTTTGCAGGAACAACATCAGTCTCAAGTCCAGCAGGCACTGCTTGAACAGTTGTTGCGTCGACAAATGCATGATTCAGGTCTTGGTCAGTCACATATTGATCCAATTAGAGCCAATAATGCTCTTGATCAGGTGATGATGGAGCAGCGTCTTTTACATGAGCTACAGCAACAATCTCATCATCAACAAAGATCTGCTGATCCATCTTTTGAGCAGCTTCTTAAAGCAAAGTTTGGTCACTTGCCACCACACCAAGAACAAAGAGATTTATCTGAATTAATATCTCGGGCTCAGCATGGACAGATACAATCATTGGATCATCAACTTCTCCAGCAGGAGATGCTACAGTCGAGACAATTGTCTATGGCATTAAGGCAGAGGGCCAATATGGAGGACAAGAGGCATGTTGGTGGTCCTATCTGGCCAGAGGATGAGGCTGATCAGCAGTTTTTCAGAGGACATGCTGGCACACAACGTTTACCGACTTCAGGGTTTGATTTATACCATCAACAGAGGCAAGCTCATGCTGACCAGCTGAATCACCTTGAGCGCAATCTTTCCTTTCAAGATCGGTTTAGACTAGGTCTCTATGAGCCTGCTTCACTTCCACTTGAGAGATCAATATCCTATCCTGATGTTGCTCAGGGGATGAATCTGGATGTTGTTAATGCTATGGCTCGTGCTCGGGCTTTAGAATTGCAAGAGTCCAGTGCACCACCTGGTGGTCAACTGGGGCAATATGCACCCGGTACCATTCCACAGAATCATCATCATTCTCTAGTCGGTAACCAGTTTCATGTTTCACATTTTGATGGAACTGAAGGCAGCTGGTCTGAGAAAAATGAGCGACTTGGAAATGATTGGATGGAGTCTCGCATTCAACAACTGCATATCAATGCTGAGCAACAGAAAAGGGAGTTGGAAGCTAAAATGATTTCTGAGGATCCAACTTTATGGATGTCAGACGGGCTTAATGATGAGAAGTCAAAGCAGTTATTAATGGAACTCCTCAATCAGAAATCTGTTCATCAACCTACAGAATCGTTGGATGTAGGAAGTGGAGCATCTTTCAATAGACCATCATCTGGCCTCTATTCTGGATCAGGCTCTCTTGAACAGTCGTTCATTCTTCATTCAGCCAAGGAAAGAGGTATGAACAACACATTGCCAGTGGGATCTTATGGTTCTAATTCTTATGAACCACTGCAAGATGAGAATCCTGGCATCTTGACAAGCAATGAGAAGATCCCATACAGGTCGGACTCTGTCTCTGTTGTCAAGGGAGCATCAATTTTAGCTGGTCTTAAAGCCAATGGTGCAACTAACAGCTCTAGTTCTGGCATGGCTGGTAACCTTTCTATGAATAGAGACGTCTTAGAGGTGGAGGGCAGGGTACGAGGATTGAAAGGTGAGGGTTTGATGAAAACTCAAGCCTTTCAAATTCAAGAAAGCATGCTTGATCAAGTGGTATCTGCTGATCGTGGAGAATTTTCAATGGATACTCATACCCTTAGTCGACATTCTTCTATTGGCTCTGGTGGCTTTCACAATGAAAAGATTGCTAATACGTTTCCAGAAGAGGTTGCTAAAGACCCGGTGACCATTCACAATAAAGATAATACTTTACTGAAACGCCCTCCTGTCGCACGCACGTCAGTGTCCCAGGATGGATTGTCTGTCCTGATTGCAGATCCGGTCGTTAGAGGGAAGAACTCAGATGGTGGAAGACCGGACCCAGCCGGTGTCTTGGTGAACCAAGAAAACATGGCAGCCATGAAGAAAGAGATGCGTTTCCGGCGCTCTTCTTCTTGTAGTGACAGTGACGTGTCAGAGACTTCTTTTATTGATATGCTGAAGAAGACGGCTCCACAAGAAGCCCATTTGACCACGGTGGGGGCTTCAGAGCCATCTGATGGAATGCAGGGAGGGAAAGGTGGGAAAAAGAAAGGGAAGAAGGGGAGACAGATAGATCCCGCTCTACTCGGTTTCAAAGTCACCAGCAACCGAATTATGATGGGTGAAATTCAACGCTTAGACGATTAGGCAAAATAGAACAGAAATTGATTTTTTTTCCTTCTTTCTTTCTCCAATCATTTTTGTAGATTGTGCAGTTTTCTGTTTTCTTCTTTGTTTAACCCTCGTGTAAGTTGTTGTATAGGTTTTTTTAGAGGTCAGCTGCGTTAAAACATGTGGCAGGTATATGTATTCCAATTCTTTTCTTTTTTTCCGCAGTTGTAAATGATCAAATTTGAGTTGGTCAAATTACCAAAGCTTTGTACAGGAACTTCGAAGAGAGTTGAAATATTATCAAAATTTGTTAAAAGAATTTACGAATTTATAAA 5455 44.53 MADGKFDLPDDLLSSRPSDHSWTPKVEASGGNEEEKVLSTFLDESKDPVASENSIPLSPQWLYAKPSEIKEVRAPTPVSLANSTDLNQKEGWRPDGSEDKKDWRKSTSENESGRRWREEERETGLLGGRRRKTERRIDNMPTKETMEGRVLPNSDRWHDGRISGHDSRTSSHDSRTSGHDSRTSSHDARRDNKWTLRWGPDDKEKESRMDKRSDADKEDVRNDSQSVSGNRPASERDSESRDKWRPRHRMESHSVGSTSSRAAPGFSLERGRGDGGSNLGFTIGRGRGNTIGRSSTGLIGVPHLDKIENIPGKPRYSSHAFCYPRGKLLDIYRRQKSDPSFSDLPDDMEELQHVTQRSVVEPLAFVSPDAEEETTLGDIWKGKITSSGVVYNSHKKGKLAECVLGDVDSIDGCQTVLDSTLESENVAATPIEDNANVSHEVTNDEACQDANDRSIWSQTSIRDVLDGKYFSHKEEEKRSSAISMPNSGGLAHTISTVASQRVMEIGGGHPGTQLNVGVNGRADSDYKRPHNFDEIESANSFDVRSKLSDDPSSIFFIPFSEQNPNKSSDVKSEELSLFYLDPQGVIQGPFIGADIILWYEQGFFGLDLPVRLADAPESPFCELGEVMPHLKVREGSVDCADTKSLSGQSGASGGILETNLPSKHPALDMNDASTTNEVHRSLAELHSLSNQHISSGMPETEAPFQLHSKGQSFHDVVAQDEEIVFSGRPGNDGYQFPNTSGVLPMVNSINQPSLLNELTDRSVPVQNENKLHPFGLLWSELEGTNMKPVEVTNSKHTKLVNMPSNMVRTAPLVGKPEASLNAETWLDVYRRSMHSDQSVYQDANVPRSLPHIEQESNRFDLADQLMSHQYHQALQQRNLLSHSSEATLDHHMQQQNLIHQQQLLANRSTPDLDHFLNLQMQQQQQRQLQLQHQLQQQQLQQQQKLLQEQHQSQVQQALLEQLLRRQMHDSGLGQSHIDPIRANNALDQVMMEQRLLHELQQQSHHQQRSADPSFEQLLKAKFGHLPPHQEQRDLSELISRAQHGQIQSLDHQLLQQEMLQSRQLSMALRQRANMEDKRHVGGPIWPEDEADQQFFRGHAGTQRLPTSGFDLYHQQRQAHADQLNHLERNLSFQDRFRLGLYEPASLPLERSISYPDVAQGMNLDVVNAMARARALELQESSAPPGGQLGQYAPGTIPQNHHHSLVGNQFHVSHFDGTEGSWSEKNERLGNDWMESRIQQLHINAEQQKRELEAKMISEDPTLWMSDGLNDEKSKQLLMELLNQKSVHQPTESLDVGSGASFNRPSSGLYSGSGSLEQSFILHSAKERGMNNTLPVGSYGSNSYEPLQDENPGILTSNEKIPYRSDSVSVVKGASILAGLKANGATNSSSSGMAGNLSMNRDVLEVEGRVRGLKGEGLMKTQAFQIQESMLDQVVSADRGEFSMDTHTLSRHSSIGSGGFHNEKIANTFPEEVAKDPVTIHNKDNTLLKRPPVARTSVSQDGLSVLIADPVVRGKNSDGGRPDPAGVLVNQENMAAMKKEMRFRRSSSCSDSDVSETSFIDMLKKTAPQEAHLTTVGASEPSDGMQGGKGGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRLDD 1624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 76319508 76328688 + XM_039019579.1 Bhi12g02417 54229

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02417 1624 Coils Coil 982 1002 - -
Bhi12g02417 1624 CDD GYF 574 631 IPR003169 GO:0005515
Bhi12g02417 1624 Coils Coil 1230 1254 - -
Bhi12g02417 1624 SUPERFAMILY GYF domain 571 630 IPR035445 -
Bhi12g02417 1624 SMART gyf_5 575 629 IPR003169 GO:0005515
Bhi12g02417 1624 MobiDBLite consensus disorder prediction 66 278 - -
Bhi12g02417 1624 Coils Coil 918 940 - -
Bhi12g02417 1624 ProSiteProfiles GYF domain profile. 574 624 IPR003169 GO:0005515
Bhi12g02417 1624 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1624 - -
Bhi12g02417 1624 Gene3D - 561 644 IPR035445 -
Bhi12g02417 1624 MobiDBLite consensus disorder prediction 1574 1600 - -
Bhi12g02417 1624 MobiDBLite consensus disorder prediction 234 254 - -
Bhi12g02417 1624 MobiDBLite consensus disorder prediction 1 34 - -
Bhi12g02417 1624 MobiDBLite consensus disorder prediction 91 224 - -
Bhi12g02417 1624 Pfam GYF domain 578 615 IPR003169 GO:0005515
Bhi12g02417 1624 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1624 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02417 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein - csv:101204211 2699.46
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00258 Bhi-Chr4:6235161 Bhi12g02417 Bhi-Chr12:76319508 2.16E-18 dispersed
Bhi04g00259 Bhi-Chr4:6235161 Bhi12g02417 Bhi-Chr12:76319508 2.15E-18 dispersed
Bhi12g02417 Bhi-Chr12:76319508 Bhi12g02418 Bhi-Chr12:76319508 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1305 . . . Bda11g00384 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy11g01812 Cme11g02345 . . . Bda11g00384 . . . Bma06g01339 Sed09g0359 . . . . . . Cpe17g00925 . Bhi12g02417 Tan06g1477 Cmetu11g1068 . . . . . . . . . . . Lsi09g01748 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003820 2 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 2 44