Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi12g02424 | AAAAAAAAAAGACCGAAATGTCCGAAATGCTGGGCAGTAGTAAAACATAGATTCATTTCCCCCTCTTTGATTTTCCACTTTTTGACAAATGGGAAATGGAATAGAGCCAAGCCAATGAAGAAGCTGTAATGCAAAATAAAGTAAACAAGAAGGGCAAACAAAATCCAAAATTGACTCATTTGAAGGGTTGAGGCAGCATCAGCATCAGCCTCAGCCAAAGCCAAAGCCAAAGCCAAAGCCAAGCCATCAAATTAAAGCCTCTTCCAAGAACTCAATCATGGAGAAGGAGGACCCATCTTCTTCTTTTATCTGTTTGTTCTCTCAAAATCTCATCCTCTCATAAACCCCAATTAAGTCCACACAGAGGAACCCACCTTCTTTCTTGGGTCCTCCCCCACCCCATCCCCACACCCAGACATGGCAGACCATAACAACAACAACAACAACAACAACAAACCATCAGTTGCAGCAGCTTCATCAACTCCAATTACACCATCCTCAGATATCAAAGACTTCAGTATCATTATTTCTAACAAAGATCAAAACAACAACAACAACAAACAATTGGCTCCTAAACGTACCTCCAATAAAGACCGTCATAAAAAAGTTGATGGCCGTGGTCGTAGGATCCGTATGCCTGCTCTCTGTGCTGCTCGTGTCTTTCAATTGACTCGTGAATTAGGCCATAAGACTGATGGCGAAACCATCCAGTGGCTTCTTCAACAAGCTGAGCCTTCTATAATCGCCGCCACTGGCTCCGGTACCATCCCTGCCTCTGCCCTCCACGCCGCTGGTGTTTCTCTCTCCGACCATGATTCCTCTGTTTCCGTCTCTGCTACCTTAACCCCTAAAATCGATGCTGTTCCCAGGCCGAATTGGGCGATGATGGGAACTAATTTGAACAGATCTCACATGGCGACAACTGGATTTTGGCCGTCTTTAGGTGGAATTGGGACTGGATTCGTCAGTGAGAATCCGGGTTCGATTATGCCTAAATTTGGGTTCCATGGATTTGAATTTCAGGGGATGAATTTGGGATCGGTGAATTTTCCGACGATAATTGGGAATCAACATCAACAAATACCAGGGTTGGAGTTAGGGCTTTCGCAGGATGGGAATAATCTGAGAGGGATGTTGAATCCGCCTTCTTATTCACAAATTTATCACCAAATAGGGCAAAATCGGGACTCATCTGCACCGCCATTGCAGCAGGAACAAGCTCCTGAGAAAGACGATTCTCAAGAATCGAGATGATGATGATGATGAAGAAAGAATTGAGGATTTGGGTTTTCCGATCGAAACAGTTTCGGATTTCTAGGTCTAAAATTAGCACTAAATTGAAAGAGAGGGCAAAATGAAGAAGACAAAGATTCAAGATTGCTTCATAAATTTCAGTGTGTGTTTTCATTCTTCAAATTCAGGTGGGAAGTTTTGAGGAGAAAGTGGTTTTTATTGCAAGATTGATTGACTTTCCTTTCTTCAATTTTGAGGTGTGTGTATGATTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTCTAATTTTCCTTTATTTATATAAATAATTTCTAGAAAAGAAAAAAATGATTGTAATATTAATTTTTATGAAGTTGATGTGGAAATTTCTTCCATCATTATTGCATTAAATGCATGGTAAGGTAAGAAGAAACAACAATCTATCCATTGGAAAATTGTGGTCAATATGGAGAGCAAATACCAATTCCATCAACCTCCATAATTGTCCAATAATTTGAATGATCAGATATTAGTACCCCTTTTTTTTTCACA | 1796 | 39.76 | MADHNNNNNNNNKPSVAAASSTPITPSSDIKDFSIIISNKDQNNNNNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSLSDHDSSVSVSATLTPKIDAVPRPNWAMMGTNLNRSHMATTGFWPSLGGIGTGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQHQQIPGLELGLSQDGNNLRGMLNPPSYSQIYHQIGQNRDSSAPPLQQEQAPEKDDSQESR | 278 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 76496895 | 76499388 | - | XM_039020263.1 | Bhi12g02424 | 54236 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi12g02424 | 278 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Bhi12g02424 | 278 | MobiDBLite | consensus disorder prediction | 39 | 69 | - | - | |
| Bhi12g02424 | 278 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 27 | 278 | IPR005333 | GO:0003700 | |
| Bhi12g02424 | 278 | MobiDBLite | consensus disorder prediction | 253 | 278 | - | - | |
| Bhi12g02424 | 278 | Pfam | TCP family transcription factor | 55 | 148 | IPR017887 | - | |
| Bhi12g02424 | 278 | ProSiteProfiles | TCP domain profile. | 57 | 111 | IPR017887 | - | |
| Bhi12g02424 | 278 | PANTHER | TRANSCRIPTION FACTOR TCP20-LIKE | 27 | 278 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi01g02113 | Bhi-Chr1:48447363 | Bhi12g02424 | Bhi-Chr12:76496895 | 1.50E-69 | dispersed | |
| Bhi01g02114 | Bhi-Chr1:48447363 | Bhi12g02424 | Bhi-Chr12:76496895 | 1.50E-69 | dispersed | |
| Bhi07g01576 | Bhi-Chr7:45137800 | Bhi12g02424 | Bhi-Chr12:76496895 | 1.67E-36 | dispersed | |
| Bhi08g02014 | Bhi-Chr8:57971965 | Bhi12g02424 | Bhi-Chr12:76496895 | 2.00E-37 | dispersed | |
| Bhi12g01178 | Bhi-Chr12:34894260 | Bhi12g02424 | Bhi-Chr12:76496895 | 4.83E-33 | dispersed | |
| Bhi12g02424 | Bhi-Chr12:76496895 | Bhi02g00330 | Bhi-Chr2:6136733 | 3.08E-38 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 2747 | PF03634 | TCP | 5.50E-31 | No_clan | Bhi | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi12g02424 | - | - | cmo:103498864 | 465.307 |