Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02447 CACACTCTGTCCCTTTCTTTGCCACTCATTTCTATGCTTTTTCTCATTTTTTTCCCATTATTTTTCTTCTCTGTTCCAAGATTTTTCCTTCTCTCCCACCACAATGCCTTGAAGTTGGGCCTAAAGAGGAAAGCTAAAGACTTCCAAAATACCCATTTCTCACTCTCTTCTTTCTCTTCTTCCTTTTTCCCACTTACCCGCTATCCTTTTCTTCTCCCTTCCCTTTATCATCATCAAAGTACATTATCCACTCTTCCCAATTTTGCATTCCCTTTTTTTCTTTTCTTTTTTAACTCTGTTTCCCAATTTCTTCCTCCTTTTGCTTGTTTTTGTAATCTCTTTGCTCTCTACAACAGTTCAAACATCTTTCATAGATCGAAATTTGGTGCCCATTATGTCGAAATCCGGTTTCCTCTTGGTTTTTGAGACAATTTCTCATTGTTCTGTTTCTTCAGTTCTTCCTATTTTCTCTCCTGTTTAAGCTTTCTCAGGTTTCTGAAATGAAGGTGGAGCTTGACTTGTGAATTTCTACGAGAGCACCTTGAGAATCAGTCTTGTTTGGAGAAAAGAAAAGCATTCCGCAAATCGCTACTGTAGAAGGAAACTGAGAGTGTGTTGGAGTAGAGAAAGTTGCTTGATGTATTGGAAACTCAGGGGCATTGGTAATATGGGCGAAAGGTCTATGGACAACATGAAAGGAACTAGAGTTGCTTTGATCGAGTCATCGTCTTCGAGATTAATGAAGAGGTCACGTGCTCCTGGAAGTGGAGCCCAAGTCCCTTCGTGTATGGTTGATGGCTGCAGTTCTGACCTAAGCAAATGCAGGGACTATCATCGTCGCCATAAAGTATGCGAGCTCCATTCTAAAACACCAAAAGTAACCATTTCCGGTCAGGAACAACGATTCTGCCAGCAGTGTAGCAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACTATGACACTAAATGCAGGAAGATTTCTCTATGGCAACCAAGGTCCAAGATTCTTACCATTCGGTAATCAATTTCTGTCTGCCAGCAATGATGTGAGCTCTTCTTGGATTGGAATGATCAAACCCGAGAACAATGCACCTCTTTCTGGTGGCGACTCACAGTTCGACTTTACTGACAGAAGAAAAAGTATGTTGCCCGGGTCGTTGTCTTCTGATTACAAAGAAAAACAACTAGCAATCTCTTGCATCCCTATAGGATTGCTTCCCAAATCATCTGATACTCAGCCATTTCTCAACGTTGGATCCAGCAACGGTGGGAATGTTCAGAAAGTGCTCGGAAACGGTTCGAATCGGTTCTTTGACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCTGGGGAGATTAATCTAAGCTCCATGAGCCAATCCAACCTCATCCCCTCAGCCCATTTCATCCACAGCGACGGTCTTGGCTTGGAGAGTGACCCCATTAATTCTGGTTTGGTGTCGGACGGTAGCAGCGATGCCAACATCCAGTGCTACTCAACGTTCCAGGACGGACCTGATGGATCATCTGTTGATTTATTCAGGTTTTGAAACATGAAAGTTGGGTCATTCTTCTAGGTTCAGAGATAGATTTCTCTAGTATGCTTATTCTCCAGGATTTAACTCAGCCACTATCAATCTTCCAGTCTCTGCTTGCTTTTTTTTTGTTATGTGAATTTTAAGGAATGCTTTTGTTTTGTGTGTGAAATGTCTCTTTCAATATTTTTACTTTGTTCAGACTTCAAGTTTTGAATATTAATTTTCTGGCTCTATTTATTCCC 1854 41.91 MYWKLRGIGNMGERSMDNMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTISGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPFGNQFLSASNDVSSSWIGMIKPENNAPLSGGDSQFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLGNGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPSAHFIHSDGLGLESDPINSGLVSDGSSDANIQCYSTFQDGPDGSSVDLFRF 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 76970987 76974371 + XM_039020228.1 Bhi12g02447 54259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02447 328 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1 4 321 - -
Bhi12g02447 328 Pfam SBP domain 50 123 IPR004333 GO:0003677
Bhi12g02447 328 Gene3D - 41 111 IPR036893 GO:0003677|GO:0005634
Bhi12g02447 328 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 4 321 IPR044817 GO:0003677
Bhi12g02447 328 SUPERFAMILY SBT domain 48 129 IPR036893 GO:0003677|GO:0005634
Bhi12g02447 328 ProSiteProfiles Zinc finger SBP-type profile. 47 124 IPR004333 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01508 Bhi-Chr8:43476394 Bhi12g02447 Bhi-Chr12:76970987 6.55E-57 dispersed
Bhi08g01509 Bhi-Chr8:43476394 Bhi12g02447 Bhi-Chr12:76970987 6.55E-57 dispersed
Bhi12g02447 Bhi-Chr12:76970987 Bhi12g02449 Bhi-Chr12:76971532 0 dispersed
Bhi12g02447 Bhi-Chr12:76970987 Bhi12g02448 Bhi-Chr12:76970988 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2748 PF03110 SBP 5.60E-30 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02447 - - csv:101217032 645.195