Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02451 GGATAGAGAGAAGTGAAACAAAAAGAGGAAAGAAAGAAGCAAAAATTGGTTAAAAATAAATTTTATTATTATTATTATTGTTATTATTATTTTTTTGTTAATAGAAGAAAAAAAAAAAGAAAAATGGGAAGAGGGAGAGTAGAACTGAAGAGAATAGAGAACAAGATCAATCGACAAGTGACCTTCGCAAAACGAAGAAATGGTCTTTTGAAGAAAGCTTATGAGCTTTCCGTTCTTTGCGATGCTGAAGTTGCTCTCATCATCTTCTCTAATAGAGGAAAACTCTACGAGTTTTGCAGTAGTTCAAGCATGCTCAAAACATTAGAGAGATACCAGAAATGCAACTATGGAGCCCCAGAGCCTAATGTTTCCACAAGAGAGGCCTTGGAACTGAGTAGCCAGCAGGAGTATTTGAAGCTTAAAGCTCGCTATGAAGCTCTCCAACGATCCCAAAGGAACCTTTTGGGAGAAGACCTTGGCCCATTGAGTAGCAAAGAACTTGAATCTCTTGAAAGGCAACTTGATATGTCCCTCAAGCAGATCAGATCAACAAGGACTCAGTACATGTTAGATCAGCTCACTGATCTTCAGCGCAAGGAGCATCTTCTTAACGAAGCAAACAAGACTCTGAAACAAAGGTTAGTAGAAGGGTATCAAGTAAATGCTCTTCAATTGAACCAAAGTGCTGATGATATGATGTATGGAAGACAGCAAGCTCAGCCTTCTGGGGATGCCTTCTTCCATCCTCTAGATTGTGAACCCACCTTACAAATTGGGTATCAGCCAGATCCCATAACAGTGGTCACTGCTGGGCCAAGCATGAATAATTTCCTCCCAGGATGGTTGCCTTGAGAAACAAGAAGATGGAAATTCTTCCATTCAAAATTTGAAAAAAATTA 899 39.15 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVNALQLNQSADDMMYGRQQAQPSGDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 77158681 77164945 + XM_039051065.1 Bhi12g02451 54263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02451 242 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bhi12g02451 242 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bhi12g02451 242 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bhi12g02451 242 Coils Coil 126 146 - -
Bhi12g02451 242 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bhi12g02451 242 SUPERFAMILY SRF-like 2 76 IPR036879 GO:0003677|GO:0046983
Bhi12g02451 242 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL9 HOMOLOG 1 229 - -
Bhi12g02451 242 CDD MADS_MEF2_like 2 76 IPR033896 GO:0000977|GO:0045944
Bhi12g02451 242 ProSiteProfiles K-box domain profile. 89 185 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi12g02451 242 Pfam K-box region 91 173 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi12g02451 242 Gene3D - 13 80 IPR036879 GO:0003677|GO:0046983
Bhi12g02451 242 Coils Coil 152 172 - -
Bhi12g02451 242 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 229 - -
Bhi12g02451 242 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bhi12g02451 242 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bhi12g02451 242 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01389 Bhi-Chr1:28046262 Bhi12g02451 Bhi-Chr12:77158681 6.36E-57 dispersed
Bhi01g02245 Bhi-Chr1:53965616 Bhi12g02451 Bhi-Chr12:77158681 1.02E-106 dispersed
Bhi01g02246 Bhi-Chr1:53965694 Bhi12g02451 Bhi-Chr12:77158681 3.42E-113 dispersed
Bhi08g01059 Bhi-Chr8:34581833 Bhi12g02451 Bhi-Chr12:77158681 3.00E-57 dispersed
Bhi08g01062 Bhi-Chr8:34598902 Bhi12g02451 Bhi-Chr12:77158681 6.86E-87 dispersed
Bhi08g01063 Bhi-Chr8:34598902 Bhi12g02451 Bhi-Chr12:77158681 7.78E-87 dispersed
Bhi12g02451 Bhi-Chr12:77158681 Bhi01g02244 Bhi-Chr1:53579786 7.61E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2751 PF01486 K-box 2.90E-26 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02451 - - csv:101216798 479.944