Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02460 ATCAACAAAACAGCAAAGTTAGAGATAGAAAGAGAAAGATAGAGCACTAATTTGTTTGATGAGTGGGACTATGGCTTTTCTCTACTCTTTAGCTCATCATGATATGATGTAATTTTCATTTGGTTTTTGTTTTTTTTTTTTTGTTTTGTTTTGGGTCTATTTCTATCCATTTTCTTAAGAAAGGTTGCATCAATTTGAGTGGATATGTAATGTTATAATGAAAATAAAATAAATAAATGGATAGGGAAAGAGAGATAATGGGGAAAATTCCATATCCATTTTTACCACTCTATTGCTTATACTAAGTCCCTCTTTTCTTCTCTTTTCTCTTCTCTTCAGCTTCTTCCATGAGTTCATTCTTTGTTGGTTTTCCCTCTTCTTCTTCTTCTCAAACTTCTACTGCTATTTTTAATCTTTTGAATGTGTTTCTGCTCTATAGATCTTTGCAGGTTGGTTATCTCAAGGGTCAAACATTGATACCCACATGATTGAAATGCTTGTTTTCTCTGGTTTTTGATGACTTGGGTGTTATTGGATTGGATTCATTTGCTGTGTTTTGGGGTCTTTTTTCTGATGAACTAAGTTTGGGAATCTTTTAAGGGTTCTGTTTGGACCAATTCCTTGTTCTGGGTTTTGGTGGGCAGCTACAGGATAAAAACCAAATTCTGTTTTTTTTTTTTTTTTTTTTAAGTATTAGAAATTGAGAATCTTAGGATTCTTTTCTGGCTTCTTTTTTGTAGGTATGTGAATTTCTTATCCCTTAATCAAAAGAAATTTTTGGCTCTTACTATAGCGTTCTTGTTTTCAACTCATCTGGTTTGGCTGGGTGGATAAGAAAGCATCTTCTTTGCCATACCTTTGAAATCATTTTCAATCTGTAGTTGGGTTTTTTTTTTCCTCTTTCATTTTTACACTTCTTCTTCTCTTCATCACCATCATCCTTGATTGTTTTTTCCCCATGTCTAAGTGTTGGGTTTAATTAGACATTTTCCTGTAGATTTGATAGTGGGTCTCTCTTCTCTCTCTCTTTCTAAAACTTCTAACTGAGTTTAAGAAAGAGGTCAGACCCAGACCCACCTCACGTTGGTCACTTTGTCTAGTTTAACTTGTGTCGGCTACTGAATTGGGTGAGATTTTCTTCATGTATTTGGGGTTTAGCTCAAAGTTAGGGCATCTATTTTTGATGCTTATGTTTATGAGAAGTAGTAGTTGTTTATATGGTTGATTAGATTTCTTCCATGAACTGGTTCTTTAATGGTGGAGTTATGGAAACTAAGGCTGGTTTGCTTGGTGAGGGTGGGAAGATATGGCTCCAATTGTGGGAGACTATCATTGGGAATTGTTGCAATATACATCACCAATACTACCAGTATATTGGATCCAAGAAAGTCAGAAAAATATGGTGGAGAAGGGTTTTGGTGGCTTGGGTTCTTGGTTCTACTCTTGCTTCTTTATGGATCTTCCATTACATGAGCTCCCAAGCTACAGAGAAGAGGAAAGAAGCCTTGGGAAGTATGTGTGATGAGAGGGCTAGGATGCTTCAAGACCAGTTTAATGTTAGCATGAATCATATTCAGGCAATGTCCATCCTCATCTCCACCTTTCATCATGGCAAAAACCCATCTGCTATAGATCAGAGGACCTTTGCGAGGTACACAGAAAGAACTGCGTTTGAGAGGCCTCTTACCAGTGGTGTGGCGTATGCGGTAAGGGTGCTTCATTCTGAAAGAGAACATTTTGAGAAGCAACAAGGCTGGACAATTAAAAGGATGGACAAAATCGAACAAAGTCCGGTTCACGAAGATGACTATGCTCCAGAAGATCTGGAGCCATCACCCACCCAAGACGAATATGCTCCTGTAATCTTCGCACAGGATACAATTTCTCATGTTGTTTCTCTCGATATGCTGTCGGGAGTGGAAGACCGTAAGAATGTATTACGTGCTAGAGCATCAGGAAAGGGAGTCTTAACTGCTCCATTCAGGTTAATCAAAACAAATCGTCTAGGGGTAATACTTACATTTGCGGTCTACAAAAGAGATCTTCCCTCAAATGCCACTCCAAATGAGAGGATTCAAGCTACAGATGGGTATCTTGGCGGAGTTTTTGATATCGAGTCGCTGGTGGAGAAGTTACTTCAACAGCTCGCAAGCAACCAAACCATCCTAGTGAATGTTTATGATACCACTAACCAGTCACATCCAATCAGTATGTATGGTAAAGTTGTATCAGAAGATGGGTTGCAGCATGTTAGCCCCCTTAACTTTGGGGATCCAGACAGGAAGCATGAGATGCGATGCAGATTCAAACAAAAACAACCTTGGCCATGGTTGGCAATGACAACTTCAATTGGCATACTCATTATTGCATTGCTTGTGGTGTATATATTCCATGCAACTTTGAACCGAATCGCCAAAGTGGAGGATGATTATCATGAGATGATGGTACTCAAGAAACGGGCAGAAGATGCTGATATTGCCAAATCCCAGTTCCTTGCAACTGTTTCCCATGAGATCAGAACCCCAATGAACGGTGTTCTAGGAATGTTGCATTTGCTTATGGACACAGACTTAGATGTGACTCAACAAGATTATGTTAAAACTGCACAAGACAGTGGAAAAGCTTTGGTATCATTAATAAACGAGGTTTTGGATCAGGCAAAAATTGAATCTGGAAAGCTCGAGCTTGAAGCTATACCGTTTGATCTGCGAGCAATTTTGGATGATATTTTATCACTCTTTTCTGGGAAATCTCAAGAAAAAGGACTGGAGCTGGCAGTTTACATTTCAGATAGTGTTCCTGAGACGCTTATTGGTGATCCTGGAAGGTTTAGGCAAATCATCACTAATCTAGTGGGAAACTCAATCAAGTTCACGGAGAAAGGACACATATTTGTCACTGTTAATCTCGTCAAGGAGGTTATGGAATCAATCAATCTTGAGATCGAGTCGTCAACAAATAGCACCTTGAGTGGCTATCCTATCGCCAATAGATGTCTTAGCTGGGCAGGATTTCGAACGTTCAGTCAAGAGGGACCCACTACTTGTCATTTCATGCCATCTCCACCAGACCTTATTAACCTCATGGTATCCGTGGAAGATACGGGTGTTGGTATTCCACTAGAAGCCCAGTCACGCATTTTCACTCCCTTCATGCAGGTTCGACCATCCATCTCTAGAACTCATGGGGGAACGGGTATTGGGCTAAGTATTAGCAAATGTTTGGTTGGCCTCATGAAGGGGGAGATTGGTTTTGTGAGTGTACCTAAGGTTGGCTCTACCTTCACATTCACTGCGGTTTTCACAAAAGGTTCTTCCAATTCAAGTGAGTATAACAAAACCCAACAGATTAAGAACACTTCCATTACTGCAACCTCAGAATTTAAGGGTATGAGAGCATTAGTTGTGGACCATCAACCTATTCGGGCCAAAGTATCGAGATATCATATCCAACGACTTGGAATTAATGTCGAAGTCTTATCTGACCTGAATCAATGTCTGTCTACCACGACTATTAGTGGTTCAGCTATCAATATGATTTTTGTTGAGCAGAAACTTTGGGATCAGGAAATGAGCGCATCAGATCATTTTATCAAAAACTTGAGAAATTCTTATACGGTTCCTCCCAAACTATTTCTCCTTACTAGCTCCATTAGTTCTTCAAAAGCTAGCACTATAATTTCTGATGTATTCACCCCCACTGTCATCTTAAAGCCCTTGAGGGCAGGCATGCTCGCTGCCTCTCTACACCGAGTCATGAGTGTGGGGATCAAGGGTAATCCTCGCAACGGAGAGCTTCCTGTTCTCTCACTCCGTAATTTACTTCTTGGTCGAAAAATTCTAGTAATAGATGACAATAAGGTGAATCGTATTGTCGCTGCTGGTGCTCTACAGCGGTATGGAGCTGATGTGGTATGTGAAAACAGTGGACGAGATGCAATCCGATTGCTTACGCCACCCCATCATTTTGATGCATGTTTCATGGATATTCAGATGCCAGAAATGGACGGCTTTGAAGCTACAAGAAGAATTCGGGAAATTGAACATCGAATCAATGATGGTATCCAAGTTGGAGAACTATCAAAAGAAGCATATGAGAATACATGTTATTGGCGCGTACCCATCTTAGCCATGACTGCAGACGTAATCCAAGCTACGCATGAGGAATGCCTTCGGTGTGGGATGGATGGGTATGTTTCGAAACCGTTTGAAGTTGAGCGACTTTACCGAGAAGTTTCGCAATTTTTCCACAGTACCTCAAATGGAACTTTATAGAGAGCAATCATATAAATCCAAGGTTGCCGATGACATTGGCCTGTTCAGGAATGTACAGCATGCTTAAAAGGGTGTAAATTACCTCCGAGTAATCGAAGGTGATCGACTTCTTGGATTGCTTCATATTATGCCAGGCAAGCCTAGATTTTGTGGAAGAGTGTAAATAGTAGACAGACATGAGTGGTCGGGTGGAGTTATCGTCATCAGAACAAACGAGAAATGTCGCTATATTTTTTCGAAGTTTCCAGATTGGTCACTGAGGAAAAAAATTCAAGATTCATTTGGAAGTAGAATTCAATAGGGACTTTCTCAAATGAAAGTAATTGAAGACTGTGGTTTGCAATCTTTTTGCCTTATTTTATGATCATCCTACAAGTTGCTCATCAGAGGGGGACCAGAAATGGCACTGTAGATATAAATTTGGATGGAAGAAAGGAAGGAAGAAGAATGTTTGTGTGGCAACTGGAAGGAAAAAGTGTTTTGTATATTAAAAACATGTTTGATTTGTACTCACACAAGTTTAGTCCTCTCTTTTTCTTTTTGCTAATTTTGTTGTATACTTCTCTATTCCAAATGAAAATAGGACAAAACTTTACACACTATCAGATTTGAAGGAAAAAAAATGATAATGATTTCCATTCCTTCAGGTCTGTGTTCTGTATAAAATTTTCACCATTCATTCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGAAAAGTATTGTGTGAGCTTGAAGAGTGTCAAGTGGATCTTCCAAGAAAAGACCTACAATTTGGAAGCCTTTAATCATTGTTATTAACAAAGGGAATACCTTTTTTCTCAAA 5108 39.23 MNWFFNGGVMETKAGLLGEGGKIWLQLWETIIGNCCNIHHQYYQYIGSKKVRKIWWRRVLVAWVLGSTLASLWIFHYMSSQATEKRKEALGSMCDERARMLQDQFNVSMNHIQAMSILISTFHHGKNPSAIDQRTFARYTERTAFERPLTSGVAYAVRVLHSEREHFEKQQGWTIKRMDKIEQSPVHEDDYAPEDLEPSPTQDEYAPVIFAQDTISHVVSLDMLSGVEDRKNVLRARASGKGVLTAPFRLIKTNRLGVILTFAVYKRDLPSNATPNERIQATDGYLGGVFDIESLVEKLLQQLASNQTILVNVYDTTNQSHPISMYGKVVSEDGLQHVSPLNFGDPDRKHEMRCRFKQKQPWPWLAMTTSIGILIIALLVVYIFHATLNRIAKVEDDYHEMMVLKKRAEDADIAKSQFLATVSHEIRTPMNGVLGMLHLLMDTDLDVTQQDYVKTAQDSGKALVSLINEVLDQAKIESGKLELEAIPFDLRAILDDILSLFSGKSQEKGLELAVYISDSVPETLIGDPGRFRQIITNLVGNSIKFTEKGHIFVTVNLVKEVMESINLEIESSTNSTLSGYPIANRCLSWAGFRTFSQEGPTTCHFMPSPPDLINLMVSVEDTGVGIPLEAQSRIFTPFMQVRPSISRTHGGTGIGLSISKCLVGLMKGEIGFVSVPKVGSTFTFTAVFTKGSSNSSEYNKTQQIKNTSITATSEFKGMRALVVDHQPIRAKVSRYHIQRLGINVEVLSDLNQCLSTTTISGSAINMIFVEQKLWDQEMSASDHFIKNLRNSYTVPPKLFLLTSSISSSKASTIISDVFTPTVILKPLRAGMLAASLHRVMSVGIKGNPRNGELPVLSLRNLLLGRKILVIDDNKVNRIVAAGALQRYGADVVCENSGRDAIRLLTPPHHFDACFMDIQMPEMDGFEATRRIREIEHRINDGIQVGELSKEAYENTCYWRVPILAMTADVIQATHEECLRCGMDGYVSKPFEVERLYREVSQFFHSTSNGTL 1011
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 77407907 77415147 - XM_039019927.1 Bhi12g02460 54272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02460 1011 PANTHER HISTIDINE KINASE 3 28 1005 - -
Bhi12g02460 1011 Gene3D - 865 1008 - -
Bhi12g02460 1011 PRINTS Bacterial sensor protein C-terminal signature 615 629 IPR004358 GO:0016310|GO:0016772
Bhi12g02460 1011 PRINTS Bacterial sensor protein C-terminal signature 633 643 IPR004358 GO:0016310|GO:0016772
Bhi12g02460 1011 PRINTS Bacterial sensor protein C-terminal signature 650 668 IPR004358 GO:0016310|GO:0016772
Bhi12g02460 1011 PRINTS Bacterial sensor protein C-terminal signature 674 687 IPR004358 GO:0016310|GO:0016772
Bhi12g02460 1011 Pfam Response regulator receiver domain 867 998 IPR001789 GO:0000160
Bhi12g02460 1011 ProSiteProfiles Response regulatory domain profile. 866 1003 IPR001789 GO:0000160
Bhi12g02460 1011 ProSiteProfiles CHASE domain profile. 127 353 IPR006189 -
Bhi12g02460 1011 CDD HATPase_EvgS-ArcB-TorS-like 531 688 - -
Bhi12g02460 1011 SMART HKATPase_4 526 690 IPR003594 -
Bhi12g02460 1011 SMART REC_2 865 999 IPR001789 GO:0000160
Bhi12g02460 1011 PANTHER TWO-COMPONENT HISTIDINE KINASE 28 1005 - -
Bhi12g02460 1011 SMART HisKA_10 414 479 IPR003661 GO:0000155|GO:0007165
Bhi12g02460 1011 Pfam CHASE domain 130 326 IPR006189 -
Bhi12g02460 1011 Gene3D CHASE domain 131 360 IPR042240 -
Bhi12g02460 1011 Pfam His Kinase A (phospho-acceptor) domain 414 479 IPR003661 GO:0000155|GO:0007165
Bhi12g02460 1011 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 526 689 IPR003594 -
Bhi12g02460 1011 SMART CHASE_2 127 328 IPR006189 -
Bhi12g02460 1011 Gene3D - 78 130 - -
Bhi12g02460 1011 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 468 685 IPR036890 -
Bhi12g02460 1011 CDD REC_hyHK_CKI1_RcsC-like 867 999 - -
Bhi12g02460 1011 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 400 480 IPR036097 GO:0000155|GO:0007165
Bhi12g02460 1011 SUPERFAMILY CheY-like 864 1003 IPR011006 -
Bhi12g02460 1011 CDD HisKA 414 475 IPR003661 GO:0000155|GO:0007165
Bhi12g02460 1011 ProSiteProfiles Histidine kinase domain profile. 421 690 IPR005467 -
Bhi12g02460 1011 Gene3D - 478 691 IPR036890 -
Bhi12g02460 1011 Gene3D - 383 477 - -
Bhi12g02460 1011 ProSiteProfiles Response regulatory domain profile. 719 840 IPR001789 GO:0000160
Bhi12g02460 1011 SUPERFAMILY CheY-like 714 840 IPR011006 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01504 Bhi-Chr6:44993662 Bhi12g02460 Bhi-Chr12:77407907 2.59E-13 dispersed
Bhi09g00923 Bhi-Chr9:20789467 Bhi12g02460 Bhi-Chr12:77407907 1.99E-36 dispersed
Bhi09g00924 Bhi-Chr9:20789467 Bhi12g02460 Bhi-Chr12:77407907 1.99E-36 dispersed
Bhi10g01319 Bhi-Chr10:31667577 Bhi12g02460 Bhi-Chr12:77407907 0 dispersed
Bhi10g01320 Bhi-Chr10:31667577 Bhi12g02460 Bhi-Chr12:77407907 0 dispersed
Bhi12g00966 Bhi-Chr12:29341121 Bhi12g02460 Bhi-Chr12:77407907 0 dispersed
Bhi12g00967 Bhi-Chr12:29341121 Bhi12g02460 Bhi-Chr12:77407907 0 dispersed
Bhi12g02460 Bhi-Chr12:77407907 Bhi12g02461 Bhi-Chr12:77407907 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2755 PF03924 CHASE 1.80E-37 CL0165 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02460 K14489 - csv:101216313 1907.11