Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02502 CACTGTTCTAGCGGCGCTCTGACCCTCGGAATTGCTGTTTCTTTCCCTCCAAATTTAATGGGTTTGTTGATCTTGGTGTAGGAAAGGGGGAAGAGGGGTTTCTGGGAATCTATCGAAAATCGTGGGTTGTAGTTCACAGGGAGAAGATGAAAATACAGTGTGATGTTTGTGAGAAAGCTCCTGCTACTGTGATTTGTTGTGCGGATGAAGCGGCGCTTTGTGCGAAATGTGATGTTGAAGTTCATGCTGCGAATAAGCTTGCGAGTAAACACCAGAGGCTTCTTCTGCAGTGTCTCTCCACCAAGCTTCCTAAATGCGATATATGCCAAGACAAGGCGGCTTTCATTTTCTGTGTTGAAGACAGAGCACTATTTTGTCAAGATTGTGATGAACCAATTCACTCAACCGGTAGTCTTTCAGCAAACCACCAGAGATTCCTAGCCACTGGAATCAGAGTGGCCGTGAGCTCAAGCTGCACGAAGGATGTTGACAAGGTCAAGATGGAACCTCCAAATCCAAAGAACCCTCAGGTTCCTGCTAAAGTGCCTTCACAACAAGTTCCCAACTTCACATCCCCATGGGCTGTTGATGACTTTCTCCACTTCTCTGATCTTGAGTCCTCTGACAAGCAGAAAGAACAACTAGAGTTTGGGGAATTAGAATGGTTAGCAGAAATGGGCCTCTTTGGCGAGCAAGTTCCTCAAGAAGCTTTAGCTGCTGCTGAAGTTCCTGAGCTTCCTACATCACATTCAAGTAGTGCACTTGCATGCAGACCGACGAAGTCGACCATGTCATACAAAAAGCCTAGGATCGAGATGGTTGATGATGAGGAGTTTTTTACGGTTCCTGATCTTGGATGAACAGAAGAGAGGCACTGATGTTGAGTTGGTATGCCTTAATGAATGATACAGTTTATAACCTTACAAAATGTGTATGTATGTAGTATTTATCGTCAAAATCTATGGTTTGATAGTATGCATTATAGTAGTCTTCTATTATCTTGTGGCTAGAATATTCGTTCAGTCCGGTTATTTTTGTTTTGTATCTTATTAACCTTATTGTAACTTTTGGATCTTTTATGAAAAATGTAAGATTATTTTAAAGAATGGCAACACGTGTTCGAGATTCTTGCCCTCCGATA 1141 42.59 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSTKLPKCDICQDKAAFIFCVEDRALFCQDCDEPIHSTGSLSANHQRFLATGIRVAVSSSCTKDVDKVKMEPPNPKNPQVPAKVPSQQVPNFTSPWAVDDFLHFSDLESSDKQKEQLEFGELEWLAEMGLFGEQVPQEALAAAEVPELPTSHSSSALACRPTKSTMSYKKPRIEMVDDEEFFTVPDLG 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 78596226 78598889 - XM_039019550.1 Bhi12g02502 54314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02502 237 SMART bboxneu5 52 99 IPR000315 GO:0008270
Bhi12g02502 237 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bhi12g02502 237 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 237 - -
Bhi12g02502 237 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bhi12g02502 237 Gene3D Classic Zinc Finger 1 122 - -
Bhi12g02502 237 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Bhi12g02502 237 CDD Bbox1_BBX-like 5 47 - -
Bhi12g02502 237 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Bhi12g02502 237 Pfam B-box zinc finger 53 95 IPR000315 GO:0008270
Bhi12g02502 237 CDD Bbox1_BBX-like 56 98 - -
Bhi12g02502 237 PANTHER B-BOX ZINC FINGER PROTEIN 24 1 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g02501 Bhi-Chr12:78596226 Bhi12g02502 Bhi-Chr12:78596226 4.83E-174 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2759 PF00643 zf-B_box 5.40E-08 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02502 - - csv:101215327 455.292