Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02517 TTGGCTCAACTCACTTTCTCCCTTTCTGCCATTTCCTAGGGCTTTCTTCACCAACTTCAGCTTTCTTCTCCTCTCAACCCTTCAGGCACATGCGCACAACCGAGTTGGATGCTGTTTGGTTGCTTTAGCCTTTTATTTCCTCTATAAGGGTTATGCTAACTGTGAAAAATTTCTCATTCTTATTGGAAGATGTTTTACTTGAAAATTTCAAGTTATGGGAGAGATTCTTGGTGCAAAACAGAAAAATATGGAAGTGCAAGATCATGGTCACATAATTGAAGTGTGTGGAGATGTGCAAGCTGAAGGGCCTAGCATTGTGGGAAGTAAAATATGTGGGGATGCACCTTCTTGTGGATTTTCTGATGCAAAAAACAGTTCAAAAGATGCAAAGGAACGATCTGCGTCCATGCGGAAGCTTTGCATAGCAGTCGTTCTCTGCATCGTTTTTATGAGTGTAGAAGTAGTCGGAGGCATTAAAGCGAACAGTCTTGCAATATTGACTGATGCTGCCCATTTGTTGTCAGATGTTGCTGCATTTGCCATTTCTTTATTCTCACTCTGGGCCTCTGGTTGGGAGGCAACTCCACGTCAGTCATATGGTTTCTTCCGCATTGAAATACTCGGTGCTCTCGTTTCCATTCAGATGATCTGGCTTCTAGCTGGAATTCTTGTTTACGAAGCTATTGTCCGACTTATCAATGGTCCGGGAGAGGTTAAGGGGTTGCTCATGTTTGCTGTTTCTACGTTTGGGTTAGTTGTTAACGTAGCTATGGCTCTGCTGCTTGGTCACGAACATGGTCATGCCCATTCTCATGATCACAGTCATGGACATGGTGAGCACGACCATGGTCATGGCAGCCACGAACATGGTGATGAAGATCATAGACATCGTCATGGAATAAGTGTGACCATGCACCACCACCGCCATGAAGAGAAGGGTGGTGTGAGCGATGGTGTTGAGCACCACCATCATCATTATGCACCCAAGGAATCAGTAACGACACCCTTGCTTGAGAATTATGGTGATGACGGAAATCATCCACGAACGGTTACTAAGACGCAAAAGAAACAACGAAACATAAACGTACAGGGAGCTTATCTTCATGTACTTGGAGATTCCATCCAAAGCATTGGGGTAATGATCGGTGGCGCAATCATATGGTATAAACCCGAATACAAGATTCTTGATCTTATATGCACCCTAATTTTCTCTGCAATTGTGCTGTGCACAACAATTCAAATGCTTAGAAATATCCTTGAGGTTTTGATGGAGAGCACGCCGCGGGAGGTGGACGCAACAAAGCTTGAGAAGGGTTTGTGCGAGATGGAGGAGGTAGTTGCAATCCATGAACTGCACATATGGGCCATAACTGTTGGGAAGATTCTATTGGCATGCCATGTTATAATAAAGCCAGAGGCAAATGCAGACATGGTATTGGACAAGGTTATTGAGTATATTAGAAGAGAGTACAACATCAGCCATGTCACCATTCAGATAGAGCGCCAGTAGGATCTTCAAATGCTATACGCTTTGTAGTAGTACTTGTAGGTATGGTTTCAAACGAAGTTTCATTTCTTTTTCAATTCCCAAGTATTAAATGCATATCTTCTGCTTGTCTTTCATAAGATGGAAATGGAATTACTTTTCAATGCAAGTATATTAAGTAGGGGAAATTCAAACTTGGCTTGCTCATCATTTTAAAAA 1705 42.64 MGEILGAKQKNMEVQDHGHIIEVCGDVQAEGPSIVGSKICGDAPSCGFSDAKNSSKDAKERSASMRKLCIAVVLCIVFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIVRLINGPGEVKGLLMFAVSTFGLVVNVAMALLLGHEHGHAHSHDHSHGHGEHDHGHGSHEHGDEDHRHRHGISVTMHHHRHEEKGGVSDGVEHHHHHYAPKESVTTPLLENYGDDGNHPRTVTKTQKKQRNINVQGAYLHVLGDSIQSIGVMIGGAIIWYKPEYKILDLICTLIFSAIVLCTTIQMLRNILEVLMESTPREVDATKLEKGLCEMEEVVAIHELHIWAITVGKILLACHVIIKPEANADMVLDKVIEYIRREYNISHVTIQIERQ 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 78750545 78756543 + XM_039051323.1 Bhi12g02517 54329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02517 431 MobiDBLite consensus disorder prediction 195 258 - -
Bhi12g02517 431 MobiDBLite consensus disorder prediction 195 285 - -
Bhi12g02517 431 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 360 429 IPR036837 -
Bhi12g02517 431 SUPERFAMILY Cation efflux protein transmembrane domain-like 62 353 IPR027469 -
Bhi12g02517 431 PANTHER METAL TOLERANCE PROTEIN A1 14 430 - -
Bhi12g02517 431 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 14 430 - -
Bhi12g02517 431 TIGRFAM CDF: cation diffusion facilitator family transporter 65 431 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bhi12g02517 431 Gene3D Cation efflux protein transmembrane domain 64 351 IPR027469 -
Bhi12g02517 431 Pfam Cation efflux family 69 352 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g02513 Bhi-Chr12:78750512 Bhi12g02517 Bhi-Chr12:78750545 0 dispersed
Bhi12g02514 Bhi-Chr12:78750518 Bhi12g02517 Bhi-Chr12:78750545 0 dispersed
Bhi12g02515 Bhi-Chr12:78750518 Bhi12g02517 Bhi-Chr12:78750545 0 dispersed
Bhi12g02517 Bhi-Chr12:78750545 Bhi12g02519 Bhi-Chr12:78751188 0 dispersed
Bhi12g02516 Bhi-Chr12:78750536 Bhi12g02517 Bhi-Chr12:78750545 0 tandem
Bhi12g02517 Bhi-Chr12:78750545 Bhi12g02518 Bhi-Chr12:78750724 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02517 K14689 - csv:101213602 705.286