Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02520 TGATTTTGCAATAGTGGAGCAAACATGGAAGTGCAAGATCATGGTCACATAATTGAAGTGTGTGGAGATGTGCAAGCTGAAGGGCCTAGCATTGTGGGAAGTAAAATATGTGGGGATGCACCTTCTTGTGGATTTTCTGATGCAAAAAACAGTTCAAAAGATGCAAAGGAACGATCTGCGTCCATGCGGAAGCTTTGCATAGCAGTCGTTCTCTGCATCGTTTTTATGAGTGTAGAAGTAGTCGGAGGCATTAAAGCGAACAGTCTTGCAATATTGACTGATGCTGCCCATTTGTTGTCAGATGTTGCTGCATTTGCCATTTCTTTATTCTCACTCTGGGCCTCTGGTTGGGAGGCAACTCCACGTCAGTCATATGGTTTCTTCCGCATTGAAATACTCGGTGCTCTCGTTTCCATTCAGATGATCTGGCTTCTAGCTGGAATTCTTGTTTACGAAGCTATTGTCCGACTTATCAATGGTCCGGGAGAGGTTAAGGGGTTGCTCATGTTTGCTGTTTCTACGTTTGGGTTAGTTGTTAACGTAGCTATGGCTCTGCTGCTTGGTCACGAACATGGTCATGCCCATTCTCATGATCACAGTCATGGACATGGTGAGCACGACCATGGTCATGGCAGCCACGAACATGGTGATGAAGATCATAGACATCGTCATGGAATAAGTGTGACCATGCACCACCACCGCCATGAAGAGAAGGGTGGTGTGAGCGATGGTGTTGAGCACCACCATCATCATTATGCACCCAAGGAATCAGTAACGACACCCTTGCTTGAGAATTATGGTGATGACGGAAATCATCCACGAACGGTTACTAAGACGCAAAAGAAACAACGAAACATAAACGTACAGGGAGCTTATCTTCATGTACTTGGAGATTCCATCCAAAGCATTGGGGTAATGATCGGTGGCGCAATCATATGGTATAAACCCGAATACAAGATTCTTGATCTTATATGCACCCTAATTTTCTCTGCAATTGTGCTGTGCACAACAATTCAAATGCTTAGAAATATCCTTGAGGTTTTGATGGAGAGCACGCCGCGGGAGGTGGACGCAACAAAGCTTGAGAAGGGTTTGTGCGAGATGGAGGAGGTAGTTGCAATCCATGAACTGCACATATGGGCCATAACTGTTGGGAAGATTCTATTGGCATGCCATGTTATAATAAAGCCAGAGGCAAATGCAGACATGGTATTGGACAAGGTTATTGAGTATATTAGAAGAGAGTACAACATCAGCCATGTCACCATTCAGATAGAGCGCCAGTAGGATCTTCAAATGCTATACGCTTTGTAGTAGTACTTGTAGGTATGGTTTCAAACGAAGTTTCATTTCTTTTTCAATTCCCAAGTATTAAATGCATATCTTCTGCTTGTCTTTCATAAGATGGAAATGGAATTACTTTTCAATGCAAGTATATTAAGTAGGGGAAATTCAAACTTGGCTTGCTCATCATTTTAAAAA 1482 43.05 MEVQDHGHIIEVCGDVQAEGPSIVGSKICGDAPSCGFSDAKNSSKDAKERSASMRKLCIAVVLCIVFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIVRLINGPGEVKGLLMFAVSTFGLVVNVAMALLLGHEHGHAHSHDHSHGHGEHDHGHGSHEHGDEDHRHRHGISVTMHHHRHEEKGGVSDGVEHHHHHYAPKESVTTPLLENYGDDGNHPRTVTKTQKKQRNINVQGAYLHVLGDSIQSIGVMIGGAIIWYKPEYKILDLICTLIFSAIVLCTTIQMLRNILEVLMESTPREVDATKLEKGLCEMEEVVAIHELHIWAITVGKILLACHVIIKPEANADMVLDKVIEYIRREYNISHVTIQIERQ 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 78753403 78756543 + XM_039051328.1 Bhi12g02520 54332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02520 420 TIGRFAM CDF: cation diffusion facilitator family transporter 54 420 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bhi12g02520 420 SUPERFAMILY Cation efflux protein transmembrane domain-like 51 342 IPR027469 -
Bhi12g02520 420 MobiDBLite consensus disorder prediction 184 247 - -
Bhi12g02520 420 PANTHER METAL TOLERANCE PROTEIN A1 4 419 - -
Bhi12g02520 420 MobiDBLite consensus disorder prediction 184 274 - -
Bhi12g02520 420 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 4 419 - -
Bhi12g02520 420 Gene3D Cation efflux protein transmembrane domain 53 340 IPR027469 -
Bhi12g02520 420 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 349 418 IPR036837 -
Bhi12g02520 420 Pfam Cation efflux family 58 341 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g02518 Bhi-Chr12:78750724 Bhi12g02520 Bhi-Chr12:78753403 0 dispersed
Bhi12g02519 Bhi-Chr12:78751188 Bhi12g02520 Bhi-Chr12:78753403 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02520 K14689 - csv:101213602 705.286