Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02568 CTGTTTATGGCTACTTTAAACTTAGGCTCTGCTTCTCACTTTGTTGACCAGCTTCAGCAACGCCCCGATCTCCACCTAGATTCCCCCCCAACTTCTGACCATGTCAACCACTTCAACGCCAGCGGCGGCTCCGGCGGTAGCGGTGATGTCATGGTCCGTCGCCCCAGGGGCCGCCCTGCCGGCTCCAAGAACAAGCCAAAGCCCCCCGTGATCATCACGCGCGAGAGCGCCAACACGCTCCGCGCTCATATCTTGGAGGTCGGTGGTGGATGCGACGTCTTCGAGGCGGTGGCCGGCTATGCACGCCGACGACAACGGGGGATCTGTGTATTGAGTGGAAGTGGGATTGTGAATAATGTTAGCTTGCGGCAGCCCGCGGCTGCTGGATCGGTGTTGACGTTGCAAGGGAGGTTTGAGATTTTGTCGTTGTCGGGATCGTTCCTGCCGCCGCCTGCACCGCCCGGTGCTACCAGTCTCACCATTTTCTTGGCCGGAGGACAAGGACAAGTGGTGGGAGGGAATGTGGTGGGAGCTTTGATCGCATCGGGGCCAGTCATCGTCATAGCATCGTCGTTTAGTAACGTTGCATACGAGAGGTTGCCGTTGGATGAAGAAGAATTGCCGATGCAGGCTGGTGGTGGTGACGGTGATGGAGGCGACGGTAGCGGCGACGGTCACAACAACCCTTTTCCTGATGCATCTTCCAGTCTGCCCTTTCTTAATCTGCCTATGAACATGCCCAATCAGAATCAATTTTTTGGTTGA 765 56.73 MATLNLGSASHFVDQLQQRPDLHLDSPPTSDHVNHFNASGGSGGSGDVMVRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGGGCDVFEAVAGYARRRQRGICVLSGSGIVNNVSLRQPAAAGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIASGPVIVIASSFSNVAYERLPLDEEELPMQAGGGDGDGGDGSGDGHNNPFPDASSSLPFLNLPMNMPNQNQFFG 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 79549718 79550817 - XM_039020027.1 Bhi12g02568 54380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02568 252 MobiDBLite consensus disorder prediction 20 67 - -
Bhi12g02568 252 SUPERFAMILY AF0104/ALDC/Ptd012-like 75 208 - -
Bhi12g02568 252 CDD DUF296 79 162 IPR005175 -
Bhi12g02568 252 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 15 249 IPR014476 GO:0003680
Bhi12g02568 252 MobiDBLite consensus disorder prediction 226 241 - -
Bhi12g02568 252 Pfam Plants and Prokaryotes Conserved (PCC) domain 79 192 IPR005175 -
Bhi12g02568 252 ProSiteProfiles PPC domain profile profile. 75 211 IPR005175 -
Bhi12g02568 252 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 249 - -
Bhi12g02568 252 PIRSF ESCAROLA 3 250 IPR014476 GO:0003680
Bhi12g02568 252 MobiDBLite consensus disorder prediction 205 241 - -
Bhi12g02568 252 Gene3D - 78 208 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00551 Bhi-Chr5:13546805 Bhi12g02568 Bhi-Chr12:79549718 1.25E-96 dispersed
Bhi11g00146 Bhi-Chr11:3366473 Bhi12g02568 Bhi-Chr12:79549718 2.09E-91 dispersed
Bhi12g02568 Bhi-Chr12:79549718 Bhi12g02623 Bhi-Chr12:81027000 1.47E-62 dispersed
Bhi01g00104 Bhi-Chr1:2168956 Bhi12g02568 Bhi-Chr12:79549718 3.32E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02568 - - csv:101203160 459.914