Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02601 AATGAAATGGAAAAGAAACAAAGAAGAGTTTTTCTCTCTCTTCGAATCCGCTGCACAGGTCGTTGCGCGCTCCCGCATCGGTCCCAGCATCCGTCGCTACGCCCCGTTGCCCTCTCCCTTCACTTCCAACCAGCATTCACCTCGTTCTTCCTCAGATCTACACTCTCCGTCGCCCTTACTCTCAGCAGTCAAATGGATGGACCAACTGGTCGCGGTGGCAGTGGCATGGATATGAATTTACCAAACTATAAGCTTGGGAAAACACTTGGCATTGGGTCATTTGGGAAAGTGAAAATTGCAGAGCATGCTTTAACTGGTCATAAAGTTGCTATTAAGATCCTTAACCGCCGAAAGATTAAAAACTTGGACATGGAAGAAAAAGTGAGAAGAGAGATTAAAATATTGAGATTGTTCATGCATCCTCACATTATACGGCTCTATGAGGTTATAGAGACCCCGACAGACATTTATGTTGTGATGGAGTATGTAAAATCTGGGGAGCTCTTTGACTATATTGTAGAGAAGGGAAGGTTACAGGAGGATGAAGCCCGTAATTTTTTCCAACAGATTATCTCTGGTGTGGAGTACTGCCACAGGAATATGGTAGTTCACAGAGATCTCAAGCCGGAGAACTTGCTTCTAGACTCCAAATGTAATGTGAAGATTGCTGATTTTGGTTTGAGCAATATTATGCGTGATGGTCACTTTCTCAAGACAAGTTGTGGGAGTCCCAATTATGCTGCCCCGGAGGTCATCTCCGGGAGATTATATGCTGGACCTGAAGTAGATGTGTGGAGTTGTGGTGTGATTTTGTATGCTCTTTTATGTGGCACTCTTCCTTTTGACGATGAAAACATTCCCAACCTGTTTAAGAAAATTAAGGGTGGAATCTATACTCTTCCAAGTCATTTATCATCTGGTGCTAGAGAACTGATTCCTAGTATGCTGGTGGTTGACCCAATGAAGCGCATCACGATCCCTGAGATTCGGCAGCACCCATGGTTTCAGGCTCATCTTCCACGCTATTTAGCCGTGCCTCCACCTGATACAATGCAACAGGCAAAAAAGATCGATGAAGACATTCTTCAGGAAGTTGTAAAGATGGGATTTGACAGGAATCAGCTGGTGGAGTCTCTTCGTAACCGAATTCAAAATGAGGCTACTGTTGCTTATTATTTGTTGCTGGACAACCGATTCCGTGTTTCTAGTGGCTATCTTGGAGCCGAGTTTCAGGAGACTATGGAAACAGGCTTCAACCGTATGCACCCTGGTGATCCTATAAGTCCTGCAGGACACCGTCTTCCTGGTTATATGGACTATCAAGGAATGGGCTTAAGATCACAGTTTCCTGTCGAGAGGAAGTGGGCTCTGGGATTACAGTCTCGAGCTCATCCTCGTGAAATTATGACCGAAGTTCTTAAAGCCCTACGAGAGCTCAATGTGGCTTGGAAGAAGATTGGGCACTACAATATGAAATGTAGATGGTTGCCTGGAATTCCAGGCCAACATGAAGGCATGATTAACAACCCTGTGCATAGTAATCATTACTTTGGGGACGAGTCTACCATCATTGAAAATGACGGCGTTGTAAAATCACCGAACGTTATTAAGTTTGAAGTACAGCTGTACAAAACACGCGAAGAGAAGTATTTGCTTGATCTACAGAGGGTTCAAGGCCCCCAGTTTCTTTTCTTGGACCTTTGTGCTGCCTTCCTTGCCCAGCTCCGAGTCCTCTAAAAAGCACATAATTTCAACTCATGGGATGATGAGCTTGTGAATGAAGATTTCACATGCATAACTTATTTATCAACTTACAGAATTTTAGTTCTTCCCCTTCCCTCTTTAGATGGATAGTTCAGTCGTGTAAATCTGATTTTCGGTAGTAGAAGTTGTCGATGTTGGTGTCCAATATTGATTGGTGATGCCCGTTACCCTGCCCTTCATTACCAACAAAAAGAGAGAAAAAAATCTATTCAACTTCTTATGAAGTGTTGTAATTTAAAGACATTCTCGTGTTTCATCTCTTTCGCTTGCAGTTGCTCCTTGGCTGTCGTTTTCTCATCGTCAAGATTCCTGAAA 2079 43.53 MEKKQRRVFLSLRIRCTGRCALPHRSQHPSLRPVALSLHFQPAFTSFFLRSTLSVALTLSSQMDGPTGRGGSGMDMNLPNYKLGKTLGIGSFGKVKIAEHALTGHKVAIKILNRRKIKNLDMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGRLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSGARELIPSMLVVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEDILQEVVKMGFDRNQLVESLRNRIQNEATVAYYLLLDNRFRVSSGYLGAEFQETMETGFNRMHPGDPISPAGHRLPGYMDYQGMGLRSQFPVERKWALGLQSRAHPREIMTEVLKALRELNVAWKKIGHYNMKCRWLPGIPGQHEGMINNPVHSNHYFGDESTIIENDGVVKSPNVIKFEVQLYKTREEKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 80346881 80353927 + XM_039018743.1 Bhi12g02601 54413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02601 576 SUPERFAMILY KA1-like 390 575 IPR028375 -
Bhi12g02601 576 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 527 575 IPR001772 -
Bhi12g02601 576 SUPERFAMILY Protein kinase-like (PK-like) 78 350 IPR011009 -
Bhi12g02601 576 Pfam Kinase associated domain 1 533 575 IPR001772 -
Bhi12g02601 576 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 70 575 - -
Bhi12g02601 576 CDD UBA_SnRK1_plant 355 395 - -
Bhi12g02601 576 CDD STKc_AMPK_alpha 78 333 - -
Bhi12g02601 576 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 354 394 IPR015940 -
Bhi12g02601 576 ProSiteProfiles Protein kinase domain profile. 81 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g02601 576 SMART uba_6 356 393 IPR015940 -
Bhi12g02601 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Bhi12g02601 576 Pfam Protein kinase domain 81 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g02601 576 PANTHER SERINE/THREONINE KINASE 70 575 - -
Bhi12g02601 576 SUPERFAMILY UBA-like 343 392 IPR009060 GO:0005515
Bhi12g02601 576 Gene3D Kinase associated domain 1, KA1 456 574 - -
Bhi12g02601 576 Gene3D Transferase(Phosphotransferase) domain 1 73 411 - -
Bhi12g02601 576 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Bhi12g02601 576 CDD AMPKA_C 450 573 - -
Bhi12g02601 576 Pfam UBA/TS-N domain 355 391 IPR015940 -
Bhi12g02601 576 SMART serkin_6 81 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00007 Bhi-Chr7:356887 Bhi12g02601 Bhi-Chr12:80346881 0 dispersed
Bhi07g00008 Bhi-Chr7:356887 Bhi12g02601 Bhi-Chr12:80346881 0 dispersed
Bhi10g00557 Bhi-Chr10:12195340 Bhi12g02601 Bhi-Chr12:80346881 2.38E-43 dispersed
Bhi10g00558 Bhi-Chr10:12195340 Bhi12g02601 Bhi-Chr12:80346881 3.53E-43 dispersed
Bhi12g02601 Bhi-Chr12:80346881 Bhi12g02605 Bhi-Chr12:80347882 0 dispersed
Bhi12g02601 Bhi-Chr12:80346881 Bhi12g02602 Bhi-Chr12:80346881 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88562 PF00069 Pkinase 3.80E-80 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02601 K07198 - csv:101211720 1001.5