Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02602 AATGAAATGGAAAAGAAACAAAGAAGAGTTTTTCTCTCTCTTCGAATCCGCTGCACAGGTCGTTGCGCGCTCCCGCATCGGTCCCAGCATCCGTCGCTACGCCCCGTTGCCCTCTCCCTTCACTTCCAACCAGCATTCACCTCGTTCTTCCTCAGATCTACACTCTCCGTCGCCCTTACTCTCAGTCAAATGGATGGACCAACTGGTCGCGGTGGCAGTGGCATGGATATGAATTTACCAAACTATAAGCTTGGGAAAACACTTGGCATTGGGTCATTTGGGAAAGTGAAAATTGCAGAGCATGCTTTAACTGGTCATAAAGTTGCTATTAAGATCCTTAACCGCCGAAAGATTAAAAACTTGGACATGGAAGAAAAAGTGAGAAGAGAGATTAAAATATTGAGATTGTTCATGCATCCTCACATTATACGGCTCTATGAGGTTATAGAGACCCCGACAGACATTTATGTTGTGATGGAGTATGTAAAATCTGGGGAGCTCTTTGACTATATTGTAGAGAAGGGAAGGTTACAGGAGGATGAAGCCCGTAATTTTTTCCAACAGATTATCTCTGGTGTGGAGTACTGCCACAGGAATATGGTAGTTCACAGAGATCTCAAGCCGGAGAACTTGCTTCTAGACTCCAAATGTAATGTGAAGATTGCTGATTTTGGTTTGAGCAATATTATGCGTGATGGTCACTTTCTCAAGACAAGTTGTGGGAGTCCCAATTATGCTGCCCCGGAGGTCATCTCCGGGAGATTATATGCTGGACCTGAAGTAGATGTGTGGAGTTGTGGTGTGATTTTGTATGCTCTTTTATGTGGCACTCTTCCTTTTGACGATGAAAACATTCCCAACCTGTTTAAGAAAATTAAGGGTGGAATCTATACTCTTCCAAGTCATTTATCATCTGGTGCTAGAGAACTGATTCCTAGTATGCTGGTGGTTGACCCAATGAAGCGCATCACGATCCCTGAGATTCGGCAGCACCCATGGTTTCAGGCTCATCTTCCACGCTATTTAGCCGTGCCTCCACCTGATACAATGCAACAGGCAAAAAAGATCGATGAAGACATTCTTCAGGAAGTTGTAAAGATGGGATTTGACAGGAATCAGCTGGTGGAGTCTCTTCGTAACCGAATTCAAAATGAGGCTACTGTTGCTTATTATTTGTTGCTGGACAACCGATTCCGTGTTTCTAGTGGCTATCTTGGAGCCGAGTTTCAGGAGACTATGGAAACAGGCTTCAACCGTATGCACCCTGGTGATCCTATAAGTCCTGCAGGACACCGTCTTCCTGGTTATATGGACTATCAAGGAATGGGCTTAAGATCACAGTTTCCTGTCGAGAGGAAGTGGGCTCTGGGATTACAGTCTCGAGCTCATCCTCGTGAAATTATGACCGAAGTTCTTAAAGCCCTACGAGAGCTCAATGTGGCTTGGAAGAAGATTGGGCACTACAATATGAAATGTAGATGGTTGCCTGGAATTCCAGGCCAACATGAAGGCATGATTAACAACCCTGTGCATAGTAATCATTACTTTGGGGACGAGTCTACCATCATTGAAAATGACGGCGTTGTAAAATCACCGAACGTTATTAAGTTTGAAGTACAGCTGTACAAAACACGCGAAGAGAAGTATTTGCTTGATCTACAGAGGGTTCAAGGCCCCCAGTTTCTTTTCTTGGACCTTTGTGCTGCCTTCCTTGCCCAGCTCCGAGTCCTCTAAAAAGCACATAATTTCAACTCATGGGATGATGAGCTTGTGAATGAAGATTTCACATGCATAACTTATTTATCAACTTACAGAATTTTAGTTCTTCCCCTTCCCTCTTTAGATGGATAGTTCAGTCGTGTAAATCTGATTTTCGGTAGTAGAAGTTGTCGATGTTGGTGTCCAATATTGATTGGTGATGCCCGTTACCCTGCCCTTCATTACCAACAAAAAGAGAGAAAAAAATCTATTCAACTTCTTATGAAGTGTTGTAATTTAAAGACATTCTCGTGTTTCATCTCTTTCGCTTGCAGTTGCTCCTTGGCTGTCGTTTTCTCATCGTCAAGATTCCTGAAA 2076 43.5 MEKKQRRVFLSLRIRCTGRCALPHRSQHPSLRPVALSLHFQPAFTSFFLRSTLSVALTLSQMDGPTGRGGSGMDMNLPNYKLGKTLGIGSFGKVKIAEHALTGHKVAIKILNRRKIKNLDMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGRLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSGARELIPSMLVVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEDILQEVVKMGFDRNQLVESLRNRIQNEATVAYYLLLDNRFRVSSGYLGAEFQETMETGFNRMHPGDPISPAGHRLPGYMDYQGMGLRSQFPVERKWALGLQSRAHPREIMTEVLKALRELNVAWKKIGHYNMKCRWLPGIPGQHEGMINNPVHSNHYFGDESTIIENDGVVKSPNVIKFEVQLYKTREEKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 80346881 80353927 + XM_039018744.1 Bhi12g02602 54414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02602 575 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 353 393 IPR015940 -
Bhi12g02602 575 SUPERFAMILY Protein kinase-like (PK-like) 77 349 IPR011009 -
Bhi12g02602 575 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 526 574 IPR001772 -
Bhi12g02602 575 SUPERFAMILY KA1-like 389 574 IPR028375 -
Bhi12g02602 575 Pfam Kinase associated domain 1 532 574 IPR001772 -
Bhi12g02602 575 Gene3D Transferase(Phosphotransferase) domain 1 72 410 - -
Bhi12g02602 575 Gene3D Kinase associated domain 1, KA1 455 573 - -
Bhi12g02602 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Bhi12g02602 575 SMART uba_6 355 392 IPR015940 -
Bhi12g02602 575 PANTHER SERINE/THREONINE KINASE 69 574 - -
Bhi12g02602 575 Pfam UBA/TS-N domain 354 390 IPR015940 -
Bhi12g02602 575 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Bhi12g02602 575 CDD AMPKA_C 449 572 - -
Bhi12g02602 575 SMART serkin_6 80 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g02602 575 SUPERFAMILY UBA-like 342 391 IPR009060 GO:0005515
Bhi12g02602 575 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 69 574 - -
Bhi12g02602 575 CDD STKc_AMPK_alpha 77 332 - -
Bhi12g02602 575 ProSiteProfiles Protein kinase domain profile. 80 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g02602 575 CDD UBA_SnRK1_plant 354 394 - -
Bhi12g02602 575 Pfam Protein kinase domain 80 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g02602 Bhi-Chr12:80346881 Bhi12g02605 Bhi-Chr12:80347882 0 dispersed
Bhi12g02601 Bhi-Chr12:80346881 Bhi12g02602 Bhi-Chr12:80346881 0 tandem
Bhi12g02602 Bhi-Chr12:80346881 Bhi12g02603 Bhi-Chr12:80346924 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88563 PF00069 Pkinase 3.80E-80 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02602 K07198 - csv:101211720 1001.5