Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02603 GAATCCGCTGCACAGGTCGTTGCGCGCTCCCGCATCGGTCCCAGCATCCGTCGCTACGCCCCGTTGCCCTCTCCCTTCACTTCCAACCAGCATTCACCTCGTTCTTCCTCAGATCTACACTCTCCGTCGCCCTTACTCTCAGGTCCCAATTTGCTGGTTTGTAATCCATTTGGTTTCGATCTTTGTCCAGTGTCCTTCGTTGAATCTCGAAGGAGTCTCTGTCGAGTCAAATGGATGGACCAACTGGTCGCGGTGGCAGTGGCATGGATATGAATTTACCAAACTATAAGCTTGGGAAAACACTTGGCATTGGGTCATTTGGGAAAGTGAAAATTGCAGAGCATGCTTTAACTGGTCATAAAGTTGCTATTAAGATCCTTAACCGCCGAAAGATTAAAAACTTGGACATGGAAGAAAAAGTGAGAAGAGAGATTAAAATATTGAGATTGTTCATGCATCCTCACATTATACGGCTCTATGAGGTTATAGAGACCCCGACAGACATTTATGTTGTGATGGAGTATGTAAAATCTGGGGAGCTCTTTGACTATATTGTAGAGAAGGGAAGGTTACAGGAGGATGAAGCCCGTAATTTTTTCCAACAGATTATCTCTGGTGTGGAGTACTGCCACAGGAATATGGTAGTTCACAGAGATCTCAAGCCGGAGAACTTGCTTCTAGACTCCAAATGTAATGTGAAGATTGCTGATTTTGGTTTGAGCAATATTATGCGTGATGGTCACTTTCTCAAGACAAGTTGTGGGAGTCCCAATTATGCTGCCCCGGAGGTCATCTCCGGGAGATTATATGCTGGACCTGAAGTAGATGTGTGGAGTTGTGGTGTGATTTTGTATGCTCTTTTATGTGGCACTCTTCCTTTTGACGATGAAAACATTCCCAACCTGTTTAAGAAAATTAAGGGTGGAATCTATACTCTTCCAAGTCATTTATCATCTGGTGCTAGAGAACTGATTCCTAGTATGCTGGTGGTTGACCCAATGAAGCGCATCACGATCCCTGAGATTCGGCAGCACCCATGGTTTCAGGCTCATCTTCCACGCTATTTAGCCGTGCCTCCACCTGATACAATGCAACAGGCAAAAAAGATCGATGAAGACATTCTTCAGGAAGTTGTAAAGATGGGATTTGACAGGAATCAGCTGGTGGAGTCTCTTCGTAACCGAATTCAAAATGAGGCTACTGTTGCTTATTATTTGTTGCTGGACAACCGATTCCGTGTTTCTAGTGGCTATCTTGGAGCCGAGTTTCAGGAGACTATGGAAACAGGCTTCAACCGTATGCACCCTGGTGATCCTATAAGTCCTGCAGGACACCGTCTTCCTGGTTATATGGACTATCAAGGAATGGGCTTAAGATCACAGTTTCCTGTCGAGAGGAAGTGGGCTCTGGGATTACAGTCTCGAGCTCATCCTCGTGAAATTATGACCGAAGTTCTTAAAGCCCTACGAGAGCTCAATGTGGCTTGGAAGAAGATTGGGCACTACAATATGAAATGTAGATGGTTGCCTGGAATTCCAGGCCAACATGAAGGCATGATTAACAACCCTGTGCATAGTAATCATTACTTTGGGGACGAGTCTACCATCATTGAAAATGACGGCGTTGTAAAATCACCGAACGTTATTAAGTTTGAAGTACAGCTGTACAAAACACGCGAAGAGAAGTATTTGCTTGATCTACAGAGGGTTCAAGGCCCCCAGTTTCTTTTCTTGGACCTTTGTGCTGCCTTCCTTGCCCAGCTCCGAGTCCTCTAAAAAGCACATAATTTCAACTCATGGGATGATGAGCTTGTGAATGAAGATTTCACATGCATAACTTATTTATCAACTTACAGAATTTTAGTTCTTCCCCTTCCCTCTTTAGATGGATAGTTCAGTCGTGTAAATCTGATTTTCGGTAGTAGAAGTTGTCGATGTTGGTGTCCAATATTGATTGGTGATGCCCGTTACCCTGCCCTTCATTACCAACAAAAAGAGAGAAAAAAATCTATTCAACTTCTTATGAAGTGTTGTAATTTAAAGACATTCTCGTGTTTCATCTCTTTCGCTTGCAGTTGCTCCTTGGCTGTCGTTTTCTCATCGTCAAGATTCCTGAAA 2117 43.84 MDGPTGRGGSGMDMNLPNYKLGKTLGIGSFGKVKIAEHALTGHKVAIKILNRRKIKNLDMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGRLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSGARELIPSMLVVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEDILQEVVKMGFDRNQLVESLRNRIQNEATVAYYLLLDNRFRVSSGYLGAEFQETMETGFNRMHPGDPISPAGHRLPGYMDYQGMGLRSQFPVERKWALGLQSRAHPREIMTEVLKALRELNVAWKKIGHYNMKCRWLPGIPGQHEGMINNPVHSNHYFGDESTIIENDGVVKSPNVIKFEVQLYKTREEKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 80346924 80353927 + XM_039018747.1 Bhi12g02603 54415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02603 514 SUPERFAMILY Protein kinase-like (PK-like) 16 287 IPR011009 -
Bhi12g02603 514 Pfam Kinase associated domain 1 471 513 IPR001772 -
Bhi12g02603 514 PANTHER SERINE/THREONINE KINASE 8 513 - -
Bhi12g02603 514 Gene3D Kinase associated domain 1, KA1 394 512 - -
Bhi12g02603 514 Pfam UBA/TS-N domain 293 329 IPR015940 -
Bhi12g02603 514 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Bhi12g02603 514 SUPERFAMILY KA1-like 328 513 IPR028375 -
Bhi12g02603 514 Gene3D Transferase(Phosphotransferase) domain 1 11 349 - -
Bhi12g02603 514 SMART uba_6 294 331 IPR015940 -
Bhi12g02603 514 SUPERFAMILY UBA-like 281 330 IPR009060 GO:0005515
Bhi12g02603 514 CDD AMPKA_C 388 511 - -
Bhi12g02603 514 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 513 - -
Bhi12g02603 514 ProSiteProfiles Protein kinase domain profile. 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g02603 514 CDD STKc_AMPK_alpha 16 271 - -
Bhi12g02603 514 CDD UBA_SnRK1_plant 293 333 - -
Bhi12g02603 514 Pfam Protein kinase domain 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g02603 514 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 292 332 IPR015940 -
Bhi12g02603 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Bhi12g02603 514 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 465 513 IPR001772 -
Bhi12g02603 514 SMART serkin_6 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g02603 Bhi-Chr12:80346924 Bhi12g02605 Bhi-Chr12:80347882 0 dispersed
Bhi12g02602 Bhi-Chr12:80346881 Bhi12g02603 Bhi-Chr12:80346924 0 tandem
Bhi12g02603 Bhi-Chr12:80346924 Bhi12g02604 Bhi-Chr12:80346924 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88564 PF00069 Pkinase 2.90E-80 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02603 K07198 - csv:101211720 1001.5