Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02623 TTTCATTTTTAATTCCCTCTCTATGAAGCCAAACCCTTAACCCCAAAACTCCCACAAACTCCAAAATTTTCCTCATCCATGGCTACCCACAACATTCTCCACAAGCCCATGGAACATCTCATGATTTAGCTTCTTCAGTTTTGATCCCCCATCTCTCTTTTTCCTCACCACAATCATCACAAAACCCTCTTCAACATTCAAACCAAATTTTCCAATCCAAACACACAATTTTGCAAATTATATTCCTTTTCGTCAACTCCCAAATGGATGGAATTACACCCCACAATCGCTCTCTTCCTCCTCCTTTCCTTTCTAAAGATCTCCATCTCCACCATGGTTTATTCCACCACCACCAAAACTCCGACGACGACCAAACCCCCGGAGCTAAGAGAGATAGGGAGGAAGAAAACCCCACCACAGCCGCGATGTCCGACACCAAAGAATTATCAAATTCTTCTTCTCGACGCCCACGTGGCCGACCAGCTGGTTCCAAAAACAAGCCAAAACCACCCATTATAATCACTAGAGACAGCGCTAACGCCCTCAGATCTCATCTCATCGAAATCTCCACAGCCTCCGACATCGTCGATTCCCTCGCCGCCTTCGCACGCCGTCGCCAGCGCGGCGTTTGTATTCTAAGCGCCACTGGAACCGTCGCCAACGTCACTCTCCGGCAGCCGGCCTCCCCCGGCGCTGTCATCACCTTACATGGTAGATTTGAAATTCTCTCCCTCTCTGGCTCCTTCCTCCCACCGCCGGCTCCCCCGGCCGCCTCCGGCCTGACCGTTTACTTGGCTGGTGGGCAGGGGCAGGTCGTCGGTGGGAATGTAATCGGCCCACTTTCCGCGTCTGGTCCAGTGATTATCATGGCGGCTTCTTTTGGTAATGCTGCTTATGAACGGCTACCCATTGATGATGACGACGAAGCTTCACCGGCAGCGGAGATGGCGGGACAACAGGGAGCACCGCCACCGCCGCCCCAATTGTTGGGGGATCCTAATGGGGGATTGTTTCATGGTATGGCGCAGAATGTTGTGAATTCTTCATGCCAATTGCCCGCGGAGGCGGCGGCGGCGTTTTGGGGAGGAGGTCGGCCACCTTATTGA 1106 52.44 MDGITPHNRSLPPPFLSKDLHLHHGLFHHHQNSDDDQTPGAKRDREEENPTTAAMSDTKELSNSSSRRPRGRPAGSKNKPKPPIIITRDSANALRSHLIEISTASDIVDSLAAFARRRQRGVCILSATGTVANVTLRQPASPGAVITLHGRFEILSLSGSFLPPPAPPAASGLTVYLAGGQGQVVGGNVIGPLSASGPVIIMAASFGNAAYERLPIDDDDEASPAAEMAGQQGAPPPPPQLLGDPNGGLFHGMAQNVVNSSCQLPAEAAAAFWGGGRPPY 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 81027000 81028105 - XM_039019997.1 Bhi12g02623 54435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02623 280 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 280 IPR014476 GO:0003680
Bhi12g02623 280 Gene3D - 94 222 - -
Bhi12g02623 280 ProSiteProfiles PPC domain profile profile. 91 231 IPR005175 -
Bhi12g02623 280 MobiDBLite consensus disorder prediction 54 71 - -
Bhi12g02623 280 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 207 IPR005175 -
Bhi12g02623 280 CDD DUF296 95 206 IPR005175 -
Bhi12g02623 280 MobiDBLite consensus disorder prediction 220 248 - -
Bhi12g02623 280 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 219 - -
Bhi12g02623 280 MobiDBLite consensus disorder prediction 28 53 - -
Bhi12g02623 280 MobiDBLite consensus disorder prediction 28 85 - -
Bhi12g02623 280 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 5 280 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00273 Bhi-Chr1:5186743 Bhi12g02623 Bhi-Chr12:81027000 3.71E-76 dispersed
Bhi12g00359 Bhi-Chr12:11385206 Bhi12g02623 Bhi-Chr12:81027000 2.48E-85 dispersed
Bhi12g01646 Bhi-Chr12:53155832 Bhi12g02623 Bhi-Chr12:81027000 6.49E-60 dispersed
Bhi12g02568 Bhi-Chr12:79549718 Bhi12g02623 Bhi-Chr12:81027000 1.47E-62 dispersed
Bhi12g02623 Bhi-Chr12:81027000 Bhi01g00104 Bhi-Chr1:2168956 6.15E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02623 - - csv:101220133 446.047