Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02627 TCAAATTACTTTCAATGTAAAGAAGAAGAACAAGAAAAAAGAAAAAGGAAAAACACCCCATATTAGCCCTTTCATATGACCCACACCCAAAGATCAACTGCCCTACATCAAGAAAGTGTGATGAGTGGCGGCGGACACGGCGGAGGGCCGTGCGGCGCATGCAAGTTTTTGAGGAGAAAGTGCGTGAAAGGGTGCATTTTTGCACCGTATTTCAACTCGGACCAAGGCGCCGCCCACTTCGCCGCCGTGCATAAGGTGTTTGGAGCTAGCAATGCCTCTAAGCTCCTCCACCGCATCCCGCCTCCCAAACGTCTAGACGCTTGCGTTACGCTCTGTTACGAAGCTCTCGCTAGGGTTCGAGACCCCGTCTATGGTTGTGTTTCACAAATCTTCTCCCTTCAACAACAGGTAGTGAATTTGCAGGCAGAGCTAGCATACATTCAGGCCAAACTTTCCACCTTGCAGCGGCTATTTCCGCCGCCATTACACAATCCAACACCGACCACTCGCATCGCTCCGTTCCCGGAAACGATCCCGGGTTCTGAAATTGGCTTGCTGTCTGACGTTCCAATGCTCCTTGACCCGCTCCAAACTCCGCTAGGTTGTAATGAAATGACAAATAGCTTTATGAATCCAATTGATTATCAAGATCATATGGATGAAGATGGTGATCTTCAATCTTTGGCTCGAGAATTCGTTTCGAGGTACTTGCCCGAAGTGCAACTCCGGCCGCCGTGCTCACAGATTTAAGTCTCTCTAAACTCTTTTGTGACATCAACTTTCATCACAGCCCTTCTTTCTTTCTTTATTTTGAGATAGAACTGTATGATCAATATATATTTGGTTCTGAAAATTTGGTGAATATTATTATATATTGATCTCTTTTGTTCTGAATCA 897 45.93 MTHTQRSTALHQESVMSGGGHGGGPCGACKFLRRKCVKGCIFAPYFNSDQGAAHFAAVHKVFGASNASKLLHRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVVNLQAELAYIQAKLSTLQRLFPPPLHNPTPTTRIAPFPETIPGSEIGLLSDVPMLLDPLQTPLGCNEMTNSFMNPIDYQDHMDEDGDLQSLAREFVSRYLPEVQLRPPCSQI 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 81164454 81167708 + XM_039020028.1 Bhi12g02627 54439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02627 224 ProSiteProfiles LOB domain profile. 24 126 IPR004883 -
Bhi12g02627 224 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 16 213 - -
Bhi12g02627 224 MobiDBLite consensus disorder prediction 1 22 - -
Bhi12g02627 224 Pfam Lateral organ boundaries (LOB) domain 25 123 IPR004883 -
Bhi12g02627 224 PANTHER LOB DOMAIN CONTAINING PROTEIN 16 213 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00269 Bhi-Chr1:5111848 Bhi12g02627 Bhi-Chr12:81164454 7.88E-48 dispersed
Bhi11g02885 Bhi-Chr11:77595502 Bhi12g02627 Bhi-Chr12:81164454 1.11E-48 dispersed
Bhi12g02627 Bhi-Chr12:81164454 Bhi08g00916 Bhi-Chr8:30291794 5.43E-37 dispersed
Bhi12g02627 Bhi-Chr12:81164454 Bhi05g02025 Bhi-Chr5:62169715 2.26E-37 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2761 PF03195 LOB 2.70E-36 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02627 - - bhj:120068307 457.988