Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00017 ATGGCATTCTCCTCCAAACGACAGAGGCTGGAAGAACTGAAAGCAGAAGATACTAACGTCGACATCCACAATTCCGGCACTCCGATTCGCTACCTTTCTCTCGACCACGTTTACTCTGCTTCTTCCCCTTGCGTGAGTGCCAGCGGTTCCTCTAACGTCATGTCTAAAAAAGTTCAAGCTAGCAGGCTCCTCGTCGACCATTTGGATGATCCTACTTTCAATCCCCCTCCTCTTCTCCGAATGTACTCTCGCCGCCCTAAGGGACCACATAATTCTGCGGAAAATCCCTCCTTTTATGATTCTTTACTTGCGAGAGTGGAAGGAGGTTCGGAAGTAGTCGTGAAATCTGAAGCCCTCGACGCTGATGATTGTGTAAATGGTGAAAATGGCGGTGTAGGTCACTCCAGGATCGGTGGATTGGTCAAGAGAAAGAAGAAGCGGAAATTTGGGAGCAGCGAACTTATCAAATTGGGGATTAATTCTAGGGTTTTACGCACGATGAACGGTCCTAGATTTAGAGATGACCGTAGTAATGGCAATACTAAGAATCATATGTTCCATGGCAATGGTAGCTTGCGGAAAAAGAAGCGCACTTTTTCAGAGAACTTTGAGAAGAGTGCGTCTCATTCACCTTCCGTAAAGAGATGGATCAAATTGAATTGCGAGGGTGTTGATCCCAAAGTATTTATTGGGTTAAAGTGCAAGGTTTATTGGCCATTGGATGCTGATTGGTATTTAGGACGTGTGGTGGGATTTGATATAGAATCTAATCGCCATCATATTGCATATGAAGATAGCGACAAGGAAGATTTGCTTATTTCAACGGAGAAAATTAAATTTCATATTTCTCATGATGACGTGCAACGCTTGAACTTGAGTTGCAGTACTAATAGTGAAGAAAGTGATGCCTATGATTATAATGAGATGGTTGTGTTAGCGGCAAGTTTGGACGACTGTTTAGAACTTGACCCTGGTGATATCATCTGGGCAAAACTTACAGGTCATGCAATGTGGCCTGCAATAGTTGTTGACGAATCACTTGTTGGAGATCGTAAGGGTTTAAGAAATGTTTCTGGAGGGAGATCTGTTCCTGTTCAATTTTTTGGTACACATGATTTTGCAAGGTTGATTAAAGTGAAACAGGCTATCTCATTTCTCAAAGGGCTTCTTTCTTCATTCCACTTGAAGTGCAAGAAATTTGTTTTTGTTCGCAGCTTGGAAGAGGCTAAAACGTATCTAACTGAACAGAAGCTTCCATCAAGTATGATTCGGCTACAAAATTCAGCTAAAATTGACTGTGAAAGTGCAAGTGAAGAGGAGGAAGCAAGTTCAGATTCATGTGATGATTGCATTTATGACGACAGATTTCGACCTTCTGTTAATGGGCTTGGAACATCTCCCTATTTAGTTGGAGACTTGCAAGTAATGAGCCTTGGAAAGATTGCAAAAGACTCGGAACATTTCCAGGATGATGAATTCATCTGGCCTGAAGGGTACACTGCTCTGAGGAAATTCACATCGCTAACAGATCCAAATATCACTACCTTGTATAAAATGGAAGTATTGAGAGATCCTGAGTCAAAGAGTCGGCCATTATTTAAAGTGACACTGGATAGTGGAGAGCAGCAGTTCAAAGGATCCTCTCCCTCTATTTGTTGGAATAAGATTTACAAAAGGCTGAGGAGAGTACAAACCAACAGTTCTGATGGTTATGGTGCAGAAGATGGACTTGAAAGTTTTTGCAGGCCTGGTTCTGAGATGTTTGGTTTCTCCAATCCTGATATTATGAGACTCATACAGGGGTTATCTAAACCTGGACTTTCTTCGGGACTCTCTATGTGCAAAATGAGCTCTAAAAAATATCAAGATTCTCCTGTTGGCTTCAGGCCTGTTCGTGTTGACTGGAAGGACCTTGATAAGTGCAGTGTTTGCCATATGGACGAGGAATATGAAAACAACCTATTTCTTCAATGCGATAAATGCAGGATGATGGTTCATGCAAGATGTTATGGTGAATTGGAACCAGTTGATGGTGTGCTCTGGTTATGCAACTTATGTCGTTTAGGGGCTCCTGACTGCCCTCCTCGTTGCTGCCTCTGTCCTGTTATAGGGGGTGCTATGAAACCTACAACCGATGGGCGCTGGGCCCATTTGGCTTGTGCCATATGGATACCAGAAACTTGCTTATCTGATATAAAAAGAATGGAGCCAATTGATGGATTGAGTAGAATCAGCAAGGACCGTTGGAAGCTGCTATGTAGTATTTGTGGGGTATCTTATGGAGCATGTATCCAATGTTCAAACAATACTTGTTATGTTGCATATCATCCACTATGTGCTCGTGCAGCGGGACTGTGTGTTGAGCTTGAGGACGAGGATAGACTTCATTTACTATCCGTGGAGGAAGATGAAGAAGATCAGTGCATTCGGTTACTATCCTTTTGTAAGAAGCACAGGCCACCTTCTAATGATCGTCTAGTTGCTGAAGATCGCATTAGACAGTTTGCCCATCGGTGCTCAGAGTATAGCCCATCATGTAATCCATCTGGCTGTGCTCGTACAGAGCCTTATAATTACTTTGGAAGAAGAGGGCGGAAGGAACCTGAAGCCCTTGCTGCTGCATCCTTGAAGCGTTTATTTGTGGAAAACCAGCCTTACTTAGTTAGTGGTTACTCCCAGCATGAATTACCTGGAAGCTCACTTCCATCTGGAGGAGTGGTGGGATCCAAATTTTTTAGACTTCTGAGGCTGAAAACCTCTCAGCTGGATGCTCCTAATAACATTCTTTCTATGGCTGAAAAATATAAATACATGAGAAATACCTTCAGAAAGAGACTTGCATTTGGAAAGTCTGGAATTCATGGATTCGGTATTTTTGCAAAACATCCTCATAGAGCAGGAGACATGGTGATTGAATACTCTGGGGAACTTGTTAGACCTCCCATTGCAGATAGGAGAGAGCGCTTCATTTACAATTCATTGGTGGGTGCTGGGACTTATATGTTTAGAATCGACGATGAAAGAGTAATTGATGCTACCAGGGCTGGAAGCATTGCACATTTAATTAATCATTCTTGTGAACCAAATTGCTACTCAAGAGTTATTAGTGTAAACGGCGACGAGCATATAATAATATTTGCCAAGAGAGATATCAAGCGATGGGAGGAACTCACATATGACTACAGATTTTTTTCAATTGATGAACAACTAGCATGCTACTGTGGATTTTTGAGATGCCGGGGCATAGTCAATGACATTGAAGCAGAAGAGCGAGCAGCGAAGCTTTTTAGGGAAGATCTGGGTGGGTTTTCAAAGGAGAGGAAGGACTCTCAAATTTCCTTTGGAGTGCAAGAAGAAGTATTTCTTTACTGTTTTCTGAGCAACTTTGTGGGCTTTTTCAGTCCTGCAAAAAATAAGGAGAAATCACTTGAACTGAATCGAACTCTTCAGCAATGGCTTAGTTCGCAAGAACAACTGGGAATTTTAACAGAAAATCCGGACTTCTGCGCAAGAGAGTTGAATATGGAGCAATTTCTCCAAAACTCGATCGTCAAAGATATTCAAGAGGGACTTTCGAGTCTCCGAAGGAATTCAGTTTGGTTACTGAACGAAATGCTTGGAGCAGCTAAAATTGGGGACCCAAAATCTTGGAAGGTACTTATCATGGACAAAGTTACAGTAAAAGTGATGTCCCACAATTGTAAGATGGCAGATATTACAGATCAAGGAGTTTCATTGGTAGAAGATCTTTTTCGGAGAAGGCAACCATTGCCATCTATGGATGCCATTTACTTTCTACAACCATCAAAAGAGAATGTTGTCATGTTCTTATCTGACATGTCTGGAAGGGAGCCTTTGTACAAGAAAGCATTCGTATTTTTCAGTGCACCTATCCCAAAGGAATATGTTAATCACATCAAATGTGATACAAGCGTCTTACCTCGCATTGGTGCATTACGAGAGATGAATCTGGAATATTTTCCCATTGACAATCAGGCTTTTATCACTGATAATGGAAATGCATTGGAGGAGCTTCTTGGAAATGTTGAAAATTCTCATAAGTTTAATGCTTGCTTGAATGTAGTGGCGAATCGAATTGGCACCGTTTTTGCTTCACTTAAGGAGTATCCATTTGTGCGATATCGTGCTGGTAGGGCCATTGAAGAACCTACTGCAATATCATCACGTGACTTAGTCCCTTCAAAGCTCGCTTCTGCTATTTGGAACTGTATTACAAACTATAAGTCTTCTATTCCCAATTTTCCCCAGTCTGAAACATGTGAGCTGCTAATCTTGGATAGATCAATTGATCAGATTGCTCCTGTCATACATGAGTGGACTTATGATGCTATGTGCCATGATTTGTTGGATATGGATGGAAACAAGTATACGTATGAGATTCCTAGCAAAAAGGGTGGTCAACCGGAGAGAAAAGAGGTTGTATTGGATGACAATGATCCAATTTGGCTTGAGCTTCGGAATGTACATATTGCAGATGCTAGTGAGCGACTACACGAGAAGACAAATTCAGTATCAAAAAACAAAGCTGCACAAATTCAACAGAGTGCAAGGTTAGATGGTAATGAAATATCAACTCGAGATTTGCAAAAAATGGTTCAAGCTTTGCCACAATACACTGAGCAAGTTGATAAGATTAGTCTCCATGTAGAGATTGCTGGAAGAATCAACAAAATAATCCGGGAAACAAAACTCAGAGAGCTTGGACAACTGGAACAAGACCTTGTTTTTGGGGATGCAGGAGCCAAGGATGTCATTAACTTCCTTAGAACAAATCAGAATATAAGTCCAGAAAATAAGTTGCGTTTACTGATGATTTATGCGTCCGTCTATCCTGAAAAGTTTGAGGGAGACAAAGCTTCAAAAATAATGCAGTTGGCTAGATTATCAACTGAGGATATGAAGGTTGTGAATAATATGCGGTTGCTGGCCGGCTCCGATAGCAAAAAGTCAACAACAGGTGGTTTCTCTCTTAAGTTCAATGCACAGAAGACAAAAGAAGCAACACGAAAGGATCGAACTGGAGACGAAGAAACCTGGCAACTTTTTAGATTTTATCCCATGATAGAGGAACTCATTGAAAATCTATGCAAAGGTGAATTACCAAAGAATGAGTATCCATGCATGAATCCTCCTCCTGTAGAGAAAGACTCAAAGAGGGTTGCCCCTACCTCATCAGTTCAGACTAGTCAATCTACTGCTCCTCATTCAATGAGATCGAGACGGACACCAAATTGGGCACGACCTTCTCATTCTGACGATGGATATTCGAGAGAATCCAGCATTGCTATGGCGGCAGCCAACTTTCTCAGTTATCCCATTCTGATGGGAGCTGTTTCCCATCCGTATAGCAAGACGAAGATGGCGCAGGTTTGCCATTGTAGCCTCAATTCTAAGGCTGGCGATGTTTTCTCTGTGACTTCGTCCAGTAAGTGCGATGTCGACTATTTAGGGCAGAGTACGAAAGGGGATTTGAACCTCAAATTAGGGCATCTCGAAACTTTCGGAACTGATGGTGAAGGAAGCTTTCATGGCCCCATAGAGGAAGTAGCTAGGATTGAAGCTGAAGAAGCTGAGGTTTTGCTTGATCATTTGGGGTTACCGTATCCTTCTTCATCAAGAAATTCGCCACGTGGAATATTTTGTAGCCGTACATTGAATCTACGATCAATAACTGCCATTGGATATGACATGGATTACACATTGATGCATTATAATGTGATGGCTTGGGAAGGAAAGGCGTATGACTACTGTATGAACAATTTGAGGAACATGGGTTTCCCTGTAGATGGTCTTTCATTTGATCCTGACTTGGTTATAAGAGGCCTTGTCATAGACAAAGAGAGAGGTAATTTGGTTAAAGCAGATCGATTTGGTTATGTAATGAGGGCAATGCATGGAACCACAATGTTATCTACGCGAGATATGAGTGAGATTTACGGGAGGGAGTTTGTGGATCTACGAAAGGAGAGTCGATGGGAGTTCCTCAATACTTTCTTCTCTGTTTCTGAGGCTGTGGCATATATGCAGATGGTTGATAGATTGGACAAAGGAGCCATAGCAGAACTTGGTCCGCTTGATTATAAAGGGCTTTACAAGGCAGTTGGTAAAGCACTATTCAGAGCTCATGTTGAGGGACAACTTAAGAATGAAATTATGTCAAAGCCCGAATTGTTTGTGGAACCTGATCCTGAACTACCTTTAGCTCTTCTGGATCAAAAAGAGTCAGGCAAAAAGCTTCTGCTCATTACCAACTCGGATTTTCACTACTCAGATAAAATGATGCAACATTCTTTTAACAGATTCCTTCCAAATGATATGGGCTGGCGAGATCTATTTGATATTGTAATAGTCTCAGCTAGGAAGCCAGAGTTCTTCCAAATGTCACACCCAATGTATGAGGTAGTGACAGGTGAAGGTCTTATGCGGCCGTGCTTCAAGGCTTGTGCAGGGGGTTTGTATTCAGGGGGAAGTGCACAGATGGTTGAGAATTCATTAAATATTCATGGAGATGAAATCTTATACGTTGGTGACCATATTTACACTGATGTAAGTCAATCAAAAGTCCATTTACGCTGGCGAACGGCATTGATATGTCGAGAATTGGAAGAAGAGTATAGTGCGTTGATTCATAGCCGGGCTTATAGAGCATCACTAGTAGAACTTATAAATCAGAAGGAGGTTGTGGGAGATCTTTTCAACCAACTTCGCCTGGCTCTTCAAAGGAGAGTTAAAGACCGACCTGCACAAACACTCCCAACAACCAATATGGATGATGAGGAACTTACAGAAAGGATGCAGAAGCTGCTGATAGTTATGCAAAGACTTGATGAGAAAATTGGTCCCATGCTAGAAAGAGATGGTGAGCACTTCAACAAAAGGTGGGGATTTCTTTCACGTGCAGGTCTTTGGGATAAAAGCCATTTAATGAGACAGATTGAAAAGTATGCCGACATATATACTTCAAGGGTCTCTAATTTCTTGCATTACACGCCATTCATGTATTTCCGCTCCCAAGAACAGAACCTAGCCCATGACTCGCATTCCTACCATAAACCACAGCCAAATGGATATGCTATCGACAACGAAGGCAGCTAA 7116 41.86 MAFSSKRQRLEELKAEDTNVDIHNSGTPIRYLSLDHVYSASSPCVSASGSSNVMSKKVQASRLLVDHLDDPTFNPPPLLRMYSRRPKGPHNSAENPSFYDSLLARVEGGSEVVVKSEALDADDCVNGENGGVGHSRIGGLVKRKKKRKFGSSELIKLGINSRVLRTMNGPRFRDDRSNGNTKNHMFHGNGSLRKKKRTFSENFEKSASHSPSVKRWIKLNCEGVDPKVFIGLKCKVYWPLDADWYLGRVVGFDIESNRHHIAYEDSDKEDLLISTEKIKFHISHDDVQRLNLSCSTNSEESDAYDYNEMVVLAASLDDCLELDPGDIIWAKLTGHAMWPAIVVDESLVGDRKGLRNVSGGRSVPVQFFGTHDFARLIKVKQAISFLKGLLSSFHLKCKKFVFVRSLEEAKTYLTEQKLPSSMIRLQNSAKIDCESASEEEEASSDSCDDCIYDDRFRPSVNGLGTSPYLVGDLQVMSLGKIAKDSEHFQDDEFIWPEGYTALRKFTSLTDPNITTLYKMEVLRDPESKSRPLFKVTLDSGEQQFKGSSPSICWNKIYKRLRRVQTNSSDGYGAEDGLESFCRPGSEMFGFSNPDIMRLIQGLSKPGLSSGLSMCKMSSKKYQDSPVGFRPVRVDWKDLDKCSVCHMDEEYENNLFLQCDKCRMMVHARCYGELEPVDGVLWLCNLCRLGAPDCPPRCCLCPVIGGAMKPTTDGRWAHLACAIWIPETCLSDIKRMEPIDGLSRISKDRWKLLCSICGVSYGACIQCSNNTCYVAYHPLCARAAGLCVELEDEDRLHLLSVEEDEEDQCIRLLSFCKKHRPPSNDRLVAEDRIRQFAHRCSEYSPSCNPSGCARTEPYNYFGRRGRKEPEALAAASLKRLFVENQPYLVSGYSQHELPGSSLPSGGVVGSKFFRLLRLKTSQLDAPNNILSMAEKYKYMRNTFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYSGELVRPPIADRRERFIYNSLVGAGTYMFRIDDERVIDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKRWEELTYDYRFFSIDEQLACYCGFLRCRGIVNDIEAEERAAKLFREDLGGFSKERKDSQISFGVQEEVFLYCFLSNFVGFFSPAKNKEKSLELNRTLQQWLSSQEQLGILTENPDFCARELNMEQFLQNSIVKDIQEGLSSLRRNSVWLLNEMLGAAKIGDPKSWKVLIMDKVTVKVMSHNCKMADITDQGVSLVEDLFRRRQPLPSMDAIYFLQPSKENVVMFLSDMSGREPLYKKAFVFFSAPIPKEYVNHIKCDTSVLPRIGALREMNLEYFPIDNQAFITDNGNALEELLGNVENSHKFNACLNVVANRIGTVFASLKEYPFVRYRAGRAIEEPTAISSRDLVPSKLASAIWNCITNYKSSIPNFPQSETCELLILDRSIDQIAPVIHEWTYDAMCHDLLDMDGNKYTYEIPSKKGGQPERKEVVLDDNDPIWLELRNVHIADASERLHEKTNSVSKNKAAQIQQSARLDGNEISTRDLQKMVQALPQYTEQVDKISLHVEIAGRINKIIRETKLRELGQLEQDLVFGDAGAKDVINFLRTNQNISPENKLRLLMIYASVYPEKFEGDKASKIMQLARLSTEDMKVVNNMRLLAGSDSKKSTTGGFSLKFNAQKTKEATRKDRTGDEETWQLFRFYPMIEELIENLCKGELPKNEYPCMNPPPVEKDSKRVAPTSSVQTSQSTAPHSMRSRRTPNWARPSHSDDGYSRESSIAMAAANFLSYPILMGAVSHPYSKTKMAQVCHCSLNSKAGDVFSVTSSSKCDVDYLGQSTKGDLNLKLGHLETFGTDGEGSFHGPIEEVARIEAEEAEVLLDHLGLPYPSSSRNSPRGIFCSRTLNLRSITAIGYDMDYTLMHYNVMAWEGKAYDYCMNNLRNMGFPVDGLSFDPDLVIRGLVIDKERGNLVKADRFGYVMRAMHGTTMLSTRDMSEIYGREFVDLRKESRWEFLNTFFSVSEAVAYMQMVDRLDKGAIAELGPLDYKGLYKAVGKALFRAHVEGQLKNEIMSKPELFVEPDPELPLALLDQKESGKKLLLITNSDFHYSDKMMQHSFNRFLPNDMGWRDLFDIVIVSARKPEFFQMSHPMYEVVTGEGLMRPCFKACAGGLYSGGSAQMVENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEEEYSALIHSRAYRASLVELINQKEVVGDLFNQLRLALQRRVKDRPAQTLPTTNMDDEELTERMQKLLIVMQRLDEKIGPMLERDGEHFNKRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLHYTPFMYFRSQEQNLAHDSHSYHKPQPNGYAIDNEGS 2371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 250641 294163 + BLOR00017 Blo01g00017 54457

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00017 2371 ProSiteProfiles Zinc finger PHD-type profile. 638 689 IPR019787 -
Blo01g00017 2371 Gene3D SET domain 927 1098 IPR046341 -
Blo01g00017 2371 SUPERFAMILY HAD-like 1883 2354 IPR036412 -
Blo01g00017 2371 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 1886 2224 IPR008380 -
Blo01g00017 2371 MobiDBLite consensus disorder prediction 1727 1751 - -
Blo01g00017 2371 Gene3D - 466 605 - -
Blo01g00017 2371 SMART fyrn_3 480 524 IPR003888 GO:0005634
Blo01g00017 2371 Pfam 5' nucleotidase family 1886 2353 IPR008380 -
Blo01g00017 2371 ProSiteProfiles Post-SET domain profile. 1068 1084 IPR003616 -
Blo01g00017 2371 SMART PWWP_4 322 387 IPR000313 -
Blo01g00017 2371 Gene3D - 2047 2235 IPR023214 -
Blo01g00017 2371 Pfam PHD-finger 653 687 - -
Blo01g00017 2371 ProSitePatterns Zinc finger PHD-type signature. 641 686 IPR019786 -
Blo01g00017 2371 MobiDBLite consensus disorder prediction 1714 1763 - -
Blo01g00017 2371 Pfam F/Y rich C-terminus 530 603 IPR003889 GO:0005634
Blo01g00017 2371 Gene3D - 1333 1717 IPR027482 -
Blo01g00017 2371 CDD SET_SETD1-like 931 1080 - -
Blo01g00017 2371 Gene3D - 1183 1321 IPR043154 -
Blo01g00017 2371 ProSiteProfiles FYR domain FYRC motif profile. 528 615 IPR003889 GO:0005634
Blo01g00017 2371 ProSiteProfiles SET domain profile. 944 1062 IPR001214 GO:0005515
Blo01g00017 2371 SUPERFAMILY SET domain 940 1081 IPR046341 -
Blo01g00017 2371 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATX2 14 1096 - -
Blo01g00017 2371 Gene3D - 227 275 - -
Blo01g00017 2371 ProSiteProfiles Extended PHD (ePHD) domain profile. 694 819 IPR034732 -
Blo01g00017 2371 Pfam PWWP domain 325 413 IPR000313 -
Blo01g00017 2371 Pfam PHD-zinc-finger like domain 696 818 - -
Blo01g00017 2371 SMART PHD_3 640 687 IPR001965 -
Blo01g00017 2371 SMART PHD_3 752 819 IPR001965 -
Blo01g00017 2371 CDD PHD_ATX1_2_like 640 686 IPR042010 -
Blo01g00017 2371 Gene3D - 1569 1692 - -
Blo01g00017 2371 CDD ePHD_ATX1_2_like 697 818 IPR041956 -
Blo01g00017 2371 Coils Coil 2265 2285 - -
Blo01g00017 2371 Pfam SET domain 955 1061 IPR001214 GO:0005515
Blo01g00017 2371 Gene3D - 311 422 - -
Blo01g00017 2371 SUPERFAMILY FYVE/PHD zinc finger 633 705 IPR011011 -
Blo01g00017 2371 MobiDBLite consensus disorder prediction 168 190 - -
Blo01g00017 2371 Pfam Sec1 family 1218 1746 IPR001619 GO:0016192
Blo01g00017 2371 SUPERFAMILY Sec1/munc18-like (SM) proteins 1212 1718 IPR036045 -
Blo01g00017 2371 SUPERFAMILY Tudor/PWWP/MBT 319 429 - -
Blo01g00017 2371 ProSiteProfiles PWWP domain profile. 324 388 IPR000313 -
Blo01g00017 2371 Pfam F/Y-rich N-terminus 471 521 IPR003888 GO:0005634
Blo01g00017 2371 CDD HAD_cN-II 1887 2208 - -
Blo01g00017 2371 MobiDBLite consensus disorder prediction 2351 2371 - -
Blo01g00017 2371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 632 690 IPR013083 -
Blo01g00017 2371 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 1445 1568 IPR043127 -
Blo01g00017 2371 SMART set_7 944 1068 IPR001214 GO:0005515
Blo01g00017 2371 PANTHER PHD FINGER PROTEINS 14 1096 - -
Blo01g00017 2371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 691 820 IPR013083 -
Blo01g00017 2371 ProSiteProfiles FYR domain FYRN motif profile. 465 524 IPR003888 GO:0005634
Blo01g00017 2371 SMART fyrc_3 532 627 IPR003889 GO:0005634
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00017 - - - csv:101207476 1599.72
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00017 Blo-Chr1:250641 Blo03g00392 Blo-Chr3:9762303 0 dispersed
Blo02g00104 Blo-Chr2:736389 Blo01g00017 Blo-Chr1:250641 6.28E-10 dispersed
Blo04g00602 Blo-Chr4:5198894 Blo01g00017 Blo-Chr1:250641 2.03E-24 dispersed
Blo13g00480 Blo-Chr13:25686243 Blo01g00017 Blo-Chr1:250641 4.52E-25 dispersed
Blo01g00017 Blo-Chr1:250641 Blo18g00815 Blo-Chr18:24127582 4.13E-56 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g266 Blo01g00017 . . . . . . Bma05g00981 . . . . . . . . . . . . . . . . Cla06g00386 . Cec06g0417 . . . . . Cone15ag0684 . . . . . . . . . . Bpe05g00790 . . . Sed11g1035 . . . . . . Cpe12g00353 . Bhi12g02006 Tan06g2823 Cmetu03g0819 Lac11g1075 Hepe03g0003 . Lcy12g0924 . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005576 1 2 1 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 1 1 2 1 1 1 1 4 1 1 39
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11795 PF00995 Sec1 1.30E-98 No_clan Blo TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g00017 Blo_Chr01 FPKM 8.954576 10.418907 9.263971 9.989549 9.794428 9.734486 10.509236 15.688528 14.554062 16.728416