Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00021 ATGGTGAGCCAGGAGCAGCAGGAGGAGAAAAACCAGATTTATAGTCATCAGGTGATTCGAAAATTGGGAAAATACGAGATCGGGAGGACCCTGGGTGAAGGAAATTTCGGAAAGGTTAAGCTCGCCACGAATATTGAAACTGGCCGACCTTTCGCTGTTAAGATTATCCAGAAGAAGAGAATCATCGATCTCAACATTACCAAACAGATTAAGAGGGAAATAGCTGCACTGAAGCTTCTCAAACATCCTAATGTAGTCAAGCTACACGAGTTGTTGGCCAGTAAAACAAAGATTTACATAGTCCTGGAGTATGTGACTGGAGGGGAATTATTTGACAGAATTGCATCTAAAGGGAAGCTAAAGGAAGACGAAGGCAGGAAGCTCTTCCAGCAATTAATTGACGGTGTGAGCTACTGTCACACCAAAGGTGTTTTCCACAGGGATCTCAAGATTTCTCTTCATAGCATGTCCATCTCTTCTGACCGTGCCTTTCTCCGACCCACTTGCTTCTCCTTGTTTTTTGCTTTCGATAACCTAATGAAAACCTTGTGCTTAGAGAACTTACTTGTTGACGCCAATGGGAACCTCAAGATATCCGATTTCGGCCTTAGTGCGCTGCCTCAGCATTTTAAGGAGGATGGATTACTTCACACAACCTGTGGAAGTCCAAATTATGTTGCACCGGAGATACTTGCAAACAGAGGGTATGATGGTGCCATCTCAGACGTATGGTCATGTGGTGTAATTTTGTATGTTATTCTTACGGGATCTCTCCCTTTTGACGATAGAAATCTTGTTGTCCTTTATCATAAGATATTTAAGTGTGAGGTAAAATTACCCAAGTGGCTGTCTCCAGGAGCTCAAAACTTGATAAGAAGCATTCTTGACCCCAACCCCATTTCACGGATTACAATTCCAGGTATTAAAGCAGACAAATGGTTTAAGAAAGACTACAACCCTACATATCCTGAAGAGGAAGAAGAGGAGTACAATAACACTCACTCAAAAGCCACACCAATAAGTGAAGGGGCATTTGAGGGTGAAAAGATTCAAAAATCTTCTACACTCATAAATGCATTTCAGTTGATTGGAATGTCCTCATGCCTTGATCTTTCAGGATTCTTTGAGAAAGAGGATATTTTCGAGAGGAAGATCAGATTTACATCCAACCATTCCTTGACAGATCTTCTTGAGAGGATTGAGAATATTGTAACCGAGATGGGATTCGGTGTTCAAAAGAAAAATGGAAAGATATTAGAGATAAGCCACTCGTTGTATGTTGTTGAACTCCGAAAGACTAGTGGAGATTCATCAGCCTATAGACAGCTGTGTAAAAAACTATCAAGTGATTTGGGTGTCACCTCTGACCAAGAGCTTGTGCCCATGGAAAAATGCTGTGGTTAG 1404 41.6 MVSQEQQEEKNQIYSHQVIRKLGKYEIGRTLGEGNFGKVKLATNIETGRPFAVKIIQKKRIIDLNITKQIKREIAALKLLKHPNVVKLHELLASKTKIYIVLEYVTGGELFDRIASKGKLKEDEGRKLFQQLIDGVSYCHTKGVFHRDLKISLHSMSISSDRAFLRPTCFSLFFAFDNLMKTLCLENLLVDANGNLKISDFGLSALPQHFKEDGLLHTTCGSPNYVAPEILANRGYDGAISDVWSCGVILYVILTGSLPFDDRNLVVLYHKIFKCEVKLPKWLSPGAQNLIRSILDPNPISRITIPGIKADKWFKKDYNPTYPEEEEEEYNNTHSKATPISEGAFEGEKIQKSSTLINAFQLIGMSSCLDLSGFFEKEDIFERKIRFTSNHSLTDLLERIENIVTEMGFGVQKKNGKILEISHSLYVVELRKTSGDSSAYRQLCKKLSSDLGVTSDQELVPMEKCCG 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 318551 322266 + BLOR00021 Blo01g00021 54461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00021 467 ProSiteProfiles NAF domain profile. 352 376 IPR018451 GO:0007165
Blo01g00021 467 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Blo01g00021 467 PANTHER CBL-INTERACTING PROTEIN KINASE 21 418 458 - -
Blo01g00021 467 Gene3D Kinase associated domain 1, KA1 357 418 - -
Blo01g00021 467 Gene3D Kinase associated domain 1, KA1 419 453 - -
Blo01g00021 467 Gene3D Phosphorylase Kinase; domain 1 18 111 - -
Blo01g00021 467 PANTHER - 183 418 - -
Blo01g00021 467 SUPERFAMILY Protein kinase-like (PK-like) 22 150 IPR011009 -
Blo01g00021 467 ProSiteProfiles Protein kinase domain profile. 25 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00021 467 PANTHER - 16 150 - -
Blo01g00021 467 PANTHER - 418 458 - -
Blo01g00021 467 SUPERFAMILY Protein kinase-like (PK-like) 185 328 IPR011009 -
Blo01g00021 467 PANTHER CBL-INTERACTING PROTEIN KINASE 21 183 418 - -
Blo01g00021 467 PANTHER CBL-INTERACTING PROTEIN KINASE 21 16 150 - -
Blo01g00021 467 Pfam Protein kinase domain 25 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00021 467 Pfam Protein kinase domain 186 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00021 467 CDD CIPK_C 358 451 - -
Blo01g00021 467 Gene3D Transferase(Phosphotransferase) domain 1 112 356 - -
Blo01g00021 467 Pfam NAF domain 355 413 IPR004041 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00021 Blo-Chr1:318551 Blo02g00304 Blo-Chr2:3068255 9.25E-136 dispersed
Blo01g00021 Blo-Chr1:318551 Blo03g01518 Blo-Chr3:42071254 1.58E-120 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84063 PF00069 Pkinase 1.10E-26 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00021 K07198 - jre:108981583 592.423