Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00031 ATGGAAACAGCGGAGGAGCTTCTGAGGAAGATCCATGAGCTCGAAGCGAGTCACGCTCAGCTAAAGGAAGAGATGACGAAGCTCGTACTATCTGGAGCTACTCCCGATTTGAAAACTGACCGGCCAAGTCATCAGCATCATCGGTCGCATTCCATATCACCGCAACGGTCGAGGTTATTAGGGGGCAGAAGGAAAGGCGGTGGAGGCGGGGTTTTTGATGGTCCGAATGCCGCGACAGCTTGGAAACAAGGCTCTGCTTCTTTTAGGCATTCATCTCCGCTTCAGAGGGAAAGCCGTAGTCACGATTCTCTATTCGTCGGTGGAGGAGAAGAAGGAGGTCCTTTGCCGGTGAATTTCACTGATAGCCAATATCTGAATATTTTGCAGTCTATGGGGCAGTCTGTTTATATATTTGATCTAAATGGTCGAATAATCTACTGGAATCGAACTGCTGAAAAAACATTCGGGTATTCTGCGGCAGAAGCCCTTGGTCAGAATGTAATTGAGATTCTGGCTGATCCCCAAGATTATCCAGTAGCAAATGACATTGTCCACCGTGTCACTTTGGGGGAGAGTTGGACTGGGCAGTTCCCTGTGAAGAACAGAAGGGGGGACAGATTTTTAGTCGTTGCAACCAATACCCCATTCTATGATAACGATAATGCCTTGATTGGTATTATTTGTGTATCAAGCAATTCCTTGGTTGGGTTACGTCCAAAACATTCTGAACAAGATTCAAGCTATAGCCGACCCAGAAGTATTGTCAATACTAAACTTGGCCTTGATCCTCAACAGCCTTTGCAAGTTGCTATTGCATCAAAAATATCTAATTTGGTAAGCAACAAAGTGAAGTCAAAGATTCGGACAGGAGAAAATAGCTCCGATCGTGAAGGTGGAAGTGGAGACAGTCATCATTCTGATCATGGGTTTGCTGATGGGGTTCTCTCTGATCACAGAGAAGATGCAAATTCAAGTGGAGCTAGCACGCCACGAGGAGATTTACCCCCTTCTTCCTTCGGTGTATTCTCATCTATAGAGGAGAAGTCCGTTGGAAAATCCACTAGAGAATCAGGCAATGATGGTGAAGAAAAGCTTGCAATTCACAGGATTATTACCTCAAAGGCGGAGGCATGGATTAGTAAGAAAGGCATATCATGGCCGTGGAAAGGGAATGAACAAGAAGGATCAGAGGCAAGGAATACCCGTTTTGGTTGGCCCTGGTTGCACAATGATCAAGAGGCAGAATTACAGAACTACAAGAATTCCTCATCCGGGTTGAAACAAGAGAATCAAACAAATGAAGGTAATCGTGTGGTCAATAACGAGGCCACAGGGTCTTGGTCATCATTCAATGTTAACAGTACAAGCAGCGCGAGCAGCTGTGGTAGTACCAGCAGTAGTGCAATTAATAAAGTCGACATGGACACTGACTGCTTGGATTTTGAAATCTTGTGGGAGGACTTGACTATTGGAGAGCAAATTGGACAAGGTTCTTGTGGAACTGTATATCACGCCATGTGGACAAGTTTGTGGGGCTACGATGGTGGGAAAGGAGTGAAAGTGATGGGTAACGGCTGGGAGGAGGAAAAATATGGGAGGTCTAGCTAA 1608 45.58 METAEELLRKIHELEASHAQLKEEMTKLVLSGATPDLKTDRPSHQHHRSHSISPQRSRLLGGRRKGGGGGVFDGPNAATAWKQGSASFRHSSPLQRESRSHDSLFVGGGEEGGPLPVNFTDSQYLNILQSMGQSVYIFDLNGRIIYWNRTAEKTFGYSAAEALGQNVIEILADPQDYPVANDIVHRVTLGESWTGQFPVKNRRGDRFLVVATNTPFYDNDNALIGIICVSSNSLVGLRPKHSEQDSSYSRPRSIVNTKLGLDPQQPLQVAIASKISNLVSNKVKSKIRTGENSSDREGGSGDSHHSDHGFADGVLSDHREDANSSGASTPRGDLPPSSFGVFSSIEEKSVGKSTRESGNDGEEKLAIHRIITSKAEAWISKKGISWPWKGNEQEGSEARNTRFGWPWLHNDQEAELQNYKNSSSGLKQENQTNEGNRVVNNEATGSWSSFNVNSTSSASSCGSTSSSAINKVDMDTDCLDFEILWEDLTIGEQIGQGSCGTVYHAMWTSLWGYDGGKGVKVMGNGWEEEKYGRSS 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 414282 416975 + BLOR00031 Blo01g00031 54471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00031 535 Coils Coil 4 31 - -
Blo01g00031 535 MobiDBLite consensus disorder prediction 34 76 - -
Blo01g00031 535 ProSiteProfiles PAS repeat profile. 120 191 IPR000014 -
Blo01g00031 535 SMART pas_2 122 188 IPR000014 -
Blo01g00031 535 MobiDBLite consensus disorder prediction 286 361 - -
Blo01g00031 535 Gene3D PAS domain 132 233 - -
Blo01g00031 535 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 33 508 - -
Blo01g00031 535 CDD PAS 131 229 IPR000014 -
Blo01g00031 535 SUPERFAMILY PYP-like sensor domain (PAS domain) 126 229 IPR035965 -
Blo01g00031 535 Coils Coil 409 429 - -
Blo01g00031 535 Gene3D Phosphorylase Kinase; domain 1 473 524 - -
Blo01g00031 535 Pfam PAS fold 123 229 IPR013767 GO:0006355
Blo01g00031 535 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 508 - -
Blo01g00031 535 TIGRFAM sensory_box: PAS domain S-box protein 123 228 IPR000014 -
Blo01g00031 535 MobiDBLite consensus disorder prediction 288 319 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00031 Blo-Chr1:414282 Blo12g00064 Blo-Chr12:4463753 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00031 - - jre:108994777 612.838