Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00033 ATGATTCCGAAGAACTTTCTTTCTAGAGTTGGAAGCTTTTGTTCTGAACTTGTGGTCTCCGGATTTGTGGTGTTTCTTTTTGGAGTTGTGTCGTTTACATTACTGTTTCGTGGTGTTTGCTGCTGTCTTTTGTGTGATGTTGCTGTCAAAGTATTCTCTAGACAAGAATATTCAGAAGATGTTATACTTTCATTCAGACAGGAGGTATCTCTAATGAAAAAGCTTCGGCATCCCAATATTCTTCTCTTCATGGGCGTCGTGGCTTCAACTCAGCGTCTTTGCATTGTGACTGAGTTCCTTCCACGTGGAAGTTTATTTCGCCTACTTCAGAAAAGCACTGCCAAACTAGATTGGAGACGGCGGGTTCATATGGCATTTGATATACGGAAGAGGGGAGGAGGAGCTACAGACGCTCGAAGTTTGGGAAAAGGGTGGGTAGGTGATCCTACCGAGTCTGGGATGAGGGGAGGAGGAGCTACAGACGCTCGAAGTTTGGGAAAAGGGTGGGTAGGTGATCCTACCGAGTCTGCGCGGGGTATGAATTATCTTCACCATTGCAATCCACCCATCATTCACCGCGATTTGAAATCCTCCAATCTTCTAATTGATAAAAACTGGACCGTGAAGGTTGGTGACTTTGGTCTGTCGCGACTCAAATATGACACTTATCTTTCAACTAAGACTGGAAAGGGAACGCCACAATGGATGGCTCCGGAAGTCTTACGCAACGAACCTTCGGATGAAAAGTCTGACATATACAGTTTTGGAGTTATATTGTGGGAGCTTGCCACTGAAAAGATCCCTTGGGATAATCTTAATTCAATGCAGGTGATTGGGGCAGTGGGGTTCATGAACCAGCGGCTTGAAATTCCGAAAGACGTGGATCCACAGTGGGCTTCCATGATTGAGAGCTGCTGTCACAGTGATCCGGCAAGCCGGCCGACATTCCAGGAACTCCTAGAAAAGCTGAGAGAGCTTCAGAGAAAATACACACTTCAATTTCAGGCAGCTCGATCGGGCACCGGAGAAAACGTTCAGAAGGAATTATAG 1050 46.0 MIPKNFLSRVGSFCSELVVSGFVVFLFGVVSFTLLFRGVCCCLLCDVAVKVFSRQEYSEDVILSFRQEVSLMKKLRHPNILLFMGVVASTQRLCIVTEFLPRGSLFRLLQKSTAKLDWRRRVHMAFDIRKRGGGATDARSLGKGWVGDPTESGMRGGGATDARSLGKGWVGDPTESARGMNYLHHCNPPIIHRDLKSSNLLIDKNWTVKVGDFGLSRLKYDTYLSTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASMIESCCHSDPASRPTFQELLEKLRELQRKYTLQFQAARSGTGENVQKEL 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 423157 431886 + BLOR00033 Blo01g00033 54473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00033 349 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 176 342 - -
Blo01g00033 349 CDD STKc_MAP3K-like 27 323 - -
Blo01g00033 349 Gene3D Phosphorylase Kinase; domain 1 27 100 - -
Blo01g00033 349 ProSiteProfiles Protein kinase domain profile. 4 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00033 349 SMART serkin_6 39 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00033 349 PANTHER - 45 129 - -
Blo01g00033 349 MobiDBLite consensus disorder prediction 139 168 - -
Blo01g00033 349 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 45 129 - -
Blo01g00033 349 SUPERFAMILY Protein kinase-like (PK-like) 176 322 IPR011009 -
Blo01g00033 349 PANTHER - 176 342 - -
Blo01g00033 349 SUPERFAMILY Protein kinase-like (PK-like) 36 128 IPR011009 -
Blo01g00033 349 PIRSF ILK 174 337 - -
Blo01g00033 349 PIRSF ILK 44 134 - -
Blo01g00033 349 Pfam Protein tyrosine and serine/threonine kinase 45 128 IPR001245 GO:0004672|GO:0006468
Blo01g00033 349 Pfam Protein tyrosine and serine/threonine kinase 175 323 IPR001245 GO:0004672|GO:0006468
Blo01g00033 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Blo01g00033 349 Gene3D Transferase(Phosphotransferase) domain 1 101 348 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00033 Blo-Chr1:423157 Blo09g00517 Blo-Chr9:16385929 1.19E-86 dispersed
Blo01g00033 Blo-Chr1:423157 Blo12g00065 Blo-Chr12:4470400 6.85E-113 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84064 PF07714 PK_Tyr_Ser-Thr 9.90E-40 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00033 - - zju:107418996 445.662