Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00034 ATGGGTTTCTCAGATTTTCCCGATAATTCGGACAAGTTGAGTGGTCCGGAGTATCGTCAACACGCTTCCGAAACTCAATTTGGGATGAGAAAACGCGTCCCAAAGTGTCGTCCATACCGTCCACAGGGGCAGGCAAGGCTAACATGGGCGGCCGGAAACGGGGCCGGTCGAGGGCGACATTTGTGCTCAAGCGCAAAAATGTCGACGACACAACTCATGGCCACTTCTGTTCCTCATTGTTGGGCATGGTTGTCCCCTCTCTCTCCCTTCCACCTCTGCGGATCAGACCCTTTTTCTCCGGAGAGGAGTGCTCTGGTCGTTTTGGTTTTGGATTGGGTTTGCGATTTTGAGAGATGTGGGATGCTTCAGGCATTGATGAATCTTCTCTCTCTATGCTGGAAGCCACTCGGCCATGATGGTGAAAGATTGAACTCTGTTGGAGTTTTCGGAGCCAATTCTGGTGGAAGAGACGGCAAAGATGGCTTGCTTTGGTTCCGTGATTTTGGCAATTACGCATCCGGCGAATTCTCCATGGCCGTGGTGCAGGCTAACCAGGTTCTCGAGGACCAGATTCAGATTGAATCGGGACCTTTTGGCACCTTCGTTGGCGTCTATGATGGACATGCCGGCCCCGAGGCTGCCCAATACGTTTGTGATAACTTGTTTGGGCATTTCCAAGCAATATCAACTGAATTGAATGGAGCTGTGACTCCAGAATCAATTCAGAATGCTTTTCGCCGAACAGAGGATGGGTTCACTACCTTTGTTTCAGAGCTATGGGATACTCGGCCCCATTTAGCAACTATTGGATCTTGTTGTTTAGTTGGAATCATACGTCAACAGAGTCTCTTTGTCGCAAATGTCGGAGATTCCCGGGTTGTACTGGGCAAAAAGGTTGGCATCACCGGAGAGATTGCTGCGATCCAGTTGTCAGCAGAACATAACGCAAATCAGGAAGATGTTAGGCGGGAATTGAAAGAACTTCATCCAAATGATCCTCAAATTGTTGTTCTCAAGCGTGGAGTTTGGAGAGTAAAAGGCATCATACAGGTTTCTAAATCTATAGGCGATCTCTACTTGAAACATTGCCAGTTCAACAATGAAAGGATTAATGAAAAATTCAGACTTCCTGAACCAATAAGCATGCCAATTTTAAGTTCTGTTCCGGAAATTATTACGCATTCCATCCATGCAAATGATTCTTTTCTTATATTTGCATCTGATGGACTATGGGAACACTTGAGTAATGAAAAAGCTGTGCACATAGTTCATAGTCATCCACGTTCAGGAAGTGCAAAAAGGCTTGTGAAGGCTGCACTTCAAGAAGCAGCCAGAAAACGAGAAATGCGATACTCGGATCTTCGAAAGATTGACAAGAAGACTGGACTCCAGCTGAATTGTCTAGCCTGTGCTAAGACCATTATGAGTGAGGCAGTTGAGTTCATGCTCATCTTGGTTGGCCCATTGGACAGCTGA 1476 46.61 MGFSDFPDNSDKLSGPEYRQHASETQFGMRKRVPKCRPYRPQGQARLTWAAGNGAGRGRHLCSSAKMSTTQLMATSVPHCWAWLSPLSPFHLCGSDPFSPERSALVVLVLDWVCDFERCGMLQALMNLLSLCWKPLGHDGERLNSVGVFGANSGGRDGKDGLLWFRDFGNYASGEFSMAVVQANQVLEDQIQIESGPFGTFVGVYDGHAGPEAAQYVCDNLFGHFQAISTELNGAVTPESIQNAFRRTEDGFTTFVSELWDTRPHLATIGSCCLVGIIRQQSLFVANVGDSRVVLGKKVGITGEIAAIQLSAEHNANQEDVRRELKELHPNDPQIVVLKRGVWRVKGIIQVSKSIGDLYLKHCQFNNERINEKFRLPEPISMPILSSVPEIITHSIHANDSFLIFASDGLWEHLSNEKAVHIVHSHPRSGSAKRLVKAALQEAARKREMRYSDLRKIDKKTGLQLNCLACAKTIMSEAVEFMLILVGPLDS 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 437461 448439 + BLOR00034 Blo01g00034 54474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00034 491 CDD PP2Cc 176 447 IPR001932 -
Blo01g00034 491 Pfam Protein phosphatase 2C 200 446 IPR001932 -
Blo01g00034 491 ProSiteProfiles PPM-type phosphatase domain profile. 172 491 IPR001932 -
Blo01g00034 491 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 123 462 - -
Blo01g00034 491 PANTHER ALPHABET, ISOFORM E-RELATED 123 462 - -
Blo01g00034 491 MobiDBLite consensus disorder prediction 1 26 - -
Blo01g00034 491 Gene3D - 168 463 IPR036457 -
Blo01g00034 491 SUPERFAMILY PP2C-like 184 441 IPR036457 -
Blo01g00034 491 MobiDBLite consensus disorder prediction 12 26 - -
Blo01g00034 491 SMART PP2C_4 162 486 IPR001932 -
Blo01g00034 491 ProSitePatterns PPM-type phosphatase domain signature. 201 209 IPR000222 GO:0043169
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00034 Blo-Chr1:437461 Blo15g00384 Blo-Chr15:5408640 4.61E-133 dispersed
Blo09g00166 Blo-Chr9:5487215 Blo01g00034 Blo-Chr1:437461 7.82E-15 transposed
Blo01g00034 Blo-Chr1:437461 Blo12g00070 Blo-Chr12:4696951 1.27E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00034 K01102 - zju:107419003 544.273