Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00054 ATGTTTCAGAAGTTCACCGCTAAGGACTCCGATGGAATTTCCCTTTTAGACTCTGTTGAGGAAGTTATAACCAACCATAAAAGTCTTTCAAAGACACCCAGTTTCGTTTCTTCAATCTACAATCTTGAGCTGGGAATAACCAGTATCATTGGTGCTTCCATTGATTTCTATCGCCATGGCAGAAGGAGATGTGGAATTGAAGGTTATGCGTTGAGAGCGAATTCGTGGAAAATTTCGGAGGTTTTGGCCATGGATAGTAGCGTTCAAGGAATGCTTACTGGTTCGGAGATTCATGGATTTCATACGTTGAAAGATTTGGATATGAGAAACATTATGGATGAAGCAAATATGAGATGGCTCCGGCCCAATGAAATTCATGCCATACTTTGTAATCACAGATACTTCAACATCAATGTCAAACCATTGAACTTGCCCCCGGGTGGTACTATAAAGTTATTTGATCGTAAGATGCTTAGGAACTTCAGGAAGGATGGTCACAACTGGAAAAAGAAAAAGGATGGGAAGACAGTCAAAGAAGCACATGAGCACCTAAAAGTTGGCAATGAAGAAAGGATCCATGTATATTATGCACATGGACAGAATGCTCCAACCTTTGTCCGTCGGTGCTATTGGCTTCTTGATAAGAGTCTGGAACACATAGTTCTTGTTCATTACCGTGAAACACAAGAGAGTTCTCCAGCCACCCCTGTGAATTGTAATTCTAGTTCTGTCTCTGACCATTCTGCCCCCTCTCGTTTATCTGAGGAACTTGATTCTGGGACTGACCAAGCTCCTCGTGTTGGGGAAAATGAACTTCTAGTGCCTCATAATAATTTAACTGTGAAGAGTTATGAGCAAAGACTTCATGAAATTAACACGCTCGAATGGGATGAGCTTCTTGTAACAGATGATATTTCCAATACACCTAAAGGAGATGGCAAAGTCTGTTTTGACCGACAAAATCAAGTTGCAGCAAATGATTCCACTATTGGAGGAGGCAAGAATTTATTGGTGGAATGTCCTACATTTGACGATATAAGTGGTTCAATTGGGAGGTATAACACAAGTTATTTGGGTTCAACAAACAGCACCTACATATCTACATCGGTTAGTCAATTGAATTCAAATGCACAGAAAGGGAATTTCATATCAATGTCCTCCACTGATTCCTCGAGTCTTGGGGTCCACGAGGGTTTGCAAAGTCAGGATAGTTTTGGGCGGTGGATAAATGACATTATCTCTGACTCTCCTGGTTCAGTAGATGATTCAGCTTTTGAGCCCTCCATTTTATCTTCTTATGAGGAATTTACCTCTGCTGCTATAAATCATCATCAATCTTCTATTCCAGAACAAATTTTTGACATAACTGATATCTCTCCTGGATGGGCATTTACAACAGAAAGAACCAAGATTTTGATAACTGGATTCTTTTATGACGAGTTTGCTCATCTGGCTAAATCCAGTTTGTTTTGTGTCTGCGGCGATGTTTGTATTCCTATAGAAGTTGTTCAACTTGGAGTATATCGGTGCCTGGTACCACCACATCCACCTGGCTTTGTAAATCTATATCTCAGTTTAGAAGGTCAAAAACCAATAAGCCAAGTTCTGAATTTTGAGTATCACACCAAATTACTGGATGGTTCAGGAGTTTCTTTAGAAGAAAAAGATAGGTGGGAGGAGTTCCAATTACAGATGAGGCTTCTTGGTTTGCTTTTTTCTACATCTAAGAGCCTGAGCATTCTATCTAGTAAAGTATCACCAACCGCCCTGAAGGTAGCGAAGAACTTTGCTCAAAAAACCTCTAACATTGCCAATAGTTGGGCTTATTTGCACAAATCAATTCAAGATAATAAAATTTCATTTCCATTTGCAAAAGATGGATTATTGGAATTAATTTTAAAGAATAGGGTAAGGGAATGGCTATTAGAAAGAATTGTTGAAGGCTCCAAGAAGAGCACGGACTTTGATGCCCAAGGTCAAGGAGTAATTCACTTATGTGCCATTCTGGAATATTCATGGGCTGTACAGTTATTTGCTTGGTCGGGTTTAGCATTGGATTTTCGGGACAAATTTGGATGGACAGCCCTTCACTGGGCAGCATACTACGGAAGGGAGAAAATGGTTGCAGTTCTTCTATATGCGGGAGCAAAGCCGAACTTGGTCACAGATCCAACCCCAGAAAATCCTGGGGGATGCACAGTTGCTGATCTTGCATCTTTGAAGGGCCATGACGGCTTGGCTGCCTATCTTTCAGAAAAGGCTTTAGTATCACATTTTCAGGAAATGAGTATAGCTGGGAATGTCAGTGGTACACTGCGAACTAGCACAACTGAGGAGAGTGTAAACTCTGAGAACCTCAAAGAGGACGAGCTATTTATGAAAGATAGTTTGGCAGCTTACACAACTGCTGCCGATGCAGCAGCACGTATACAGGCTGCATTTCGTGAACATTCTTTCAAGCAAAGATCTAAAGAAGTTAAGTTTTCAAATTCAGAGAATGAAGCACGCAATATTATTGCAGCAATGAAAATTCAACATGCATTCCGTAATTATGAAATGCGACGGAAAATGGCAGCTGCTGCTCATATACAACACAGATTCCGTACTTGGAAATTGCGTAAAGATTTCCTGACAATGCGAAGGCAAGCTATCAAAATTCAAGCTGCATTCCGAGGTTTTCAAATGCGGAGGCAATACAGTAAAATTATTTGGTCGGTAGGTGTGCTTGAGAAAGCTATACTGCGATGGCGGTTGAAGAGAAAAGGCTTTCGTGGACTTCAAGTTGAACCTGTCGAATCACCTGCCGAGCAGGGACGGGAAAGTGATGCGGAGGAGGATTTTTATCGCGCAAGCCAGAGACTAGCAAGTGAGCGTGTTGAGAGATCCGTTGTACGAGTTCAGGCCTTGTTTCGCTCAAAGAAAGCACAAGAAGATTATCAGAGGATGAAGATTGCCCATCTGGAAGCGAAGCTGGAATATGAAGGAATTTTCGATCCTGAATCTTATATGCATTCTTGA 3018 41.25 MFQKFTAKDSDGISLLDSVEEVITNHKSLSKTPSFVSSIYNLELGITSIIGASIDFYRHGRRRCGIEGYALRANSWKISEVLAMDSSVQGMLTGSEIHGFHTLKDLDMRNIMDEANMRWLRPNEIHAILCNHRYFNINVKPLNLPPGGTIKLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQNAPTFVRRCYWLLDKSLEHIVLVHYRETQESSPATPVNCNSSSVSDHSAPSRLSEELDSGTDQAPRVGENELLVPHNNLTVKSYEQRLHEINTLEWDELLVTDDISNTPKGDGKVCFDRQNQVAANDSTIGGGKNLLVECPTFDDISGSIGRYNTSYLGSTNSTYISTSVSQLNSNAQKGNFISMSSTDSSSLGVHEGLQSQDSFGRWINDIISDSPGSVDDSAFEPSILSSYEEFTSAAINHHQSSIPEQIFDITDISPGWAFTTERTKILITGFFYDEFAHLAKSSLFCVCGDVCIPIEVVQLGVYRCLVPPHPPGFVNLYLSLEGQKPISQVLNFEYHTKLLDGSGVSLEEKDRWEEFQLQMRLLGLLFSTSKSLSILSSKVSPTALKVAKNFAQKTSNIANSWAYLHKSIQDNKISFPFAKDGLLELILKNRVREWLLERIVEGSKKSTDFDAQGQGVIHLCAILEYSWAVQLFAWSGLALDFRDKFGWTALHWAAYYGREKMVAVLLYAGAKPNLVTDPTPENPGGCTVADLASLKGHDGLAAYLSEKALVSHFQEMSIAGNVSGTLRTSTTEESVNSENLKEDELFMKDSLAAYTTAADAAARIQAAFREHSFKQRSKEVKFSNSENEARNIIAAMKIQHAFRNYEMRRKMAAAAHIQHRFRTWKLRKDFLTMRRQAIKIQAAFRGFQMRRQYSKIIWSVGVLEKAILRWRLKRKGFRGLQVEPVESPAEQGRESDAEEDFYRASQRLASERVERSVVRVQALFRSKKAQEDYQRMKIAHLEAKLEYEGIFDPESYMHS 1005
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 683203 705843 - BLOR00054 Blo01g00054 54494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00054 1005 Pfam IPT/TIG domain 455 540 IPR002909 -
Blo01g00054 1005 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6 99 999 - -
Blo01g00054 1005 SMART iq_5 878 900 IPR000048 GO:0005515
Blo01g00054 1005 SMART iq_5 855 877 IPR000048 GO:0005515
Blo01g00054 1005 SMART iq_5 958 980 IPR000048 GO:0005515
Blo01g00054 1005 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Blo01g00054 1005 Gene3D - 607 754 IPR036770 -
Blo01g00054 1005 ProSiteProfiles IQ motif profile. 803 832 IPR000048 GO:0005515
Blo01g00054 1005 Pfam IQ calmodulin-binding motif 881 899 IPR000048 GO:0005515
Blo01g00054 1005 ProSiteProfiles IQ motif profile. 879 903 IPR000048 GO:0005515
Blo01g00054 1005 ProSiteProfiles IQ motif profile. 960 988 IPR000048 GO:0005515
Blo01g00054 1005 ProSiteProfiles Ankyrin repeat region circular profile. 691 719 - -
Blo01g00054 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 804 906 IPR027417 -
Blo01g00054 1005 Pfam CG-1 domain 115 227 IPR005559 GO:0003677
Blo01g00054 1005 Pfam Ankyrin repeats (3 copies) 640 720 IPR002110 GO:0005515
Blo01g00054 1005 Gene3D Immunoglobulins 448 544 IPR013783 -
Blo01g00054 1005 SUPERFAMILY Ankyrin repeat 655 753 IPR036770 -
Blo01g00054 1005 MobiDBLite consensus disorder prediction 231 258 - -
Blo01g00054 1005 ProSiteProfiles CG-1 DNA-binding domain profile. 108 234 IPR005559 GO:0003677
Blo01g00054 1005 SMART CG_1_2 111 229 IPR005559 GO:0003677
Blo01g00054 1005 ProSiteProfiles IQ motif profile. 840 866 IPR000048 GO:0005515
Blo01g00054 1005 SUPERFAMILY E set domains 455 540 IPR014756 -
Blo01g00054 1005 SMART ANK_2a 691 720 IPR002110 GO:0005515
Blo01g00054 1005 SMART ANK_2a 730 759 IPR002110 GO:0005515
Blo01g00054 1005 MobiDBLite consensus disorder prediction 231 267 - -
Blo01g00054 1005 ProSiteProfiles Ankyrin repeat profile. 691 723 IPR002110 GO:0005515
Blo01g00054 1005 Gene3D - 856 903 - -
Blo01g00054 1005 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 99 999 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00054 Blo-Chr1:683203 Blo13g00257 Blo-Chr13:11839242 4.73E-29 dispersed
Blo01g00054 Blo-Chr1:683203 Blo12g00279 Blo-Chr12:16649107 1.53E-91 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11796 PF03859 CG-1 1.10E-43 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00054 K21596 - jre:108994781 1221.45