Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00062 ATGGCCTCCGAGCAGTTAATGTCTGGAAGTGGTCCCCGTTATGTTCAAATGCAATCGGAGCCATTGTCGGTCATGCCCTCCTCTTTTTTCTCTTCCCGTCAAGGCGCGCTCGAGTCCAGTCGAATCTTTGATGAGTTGCCTAGGGCCACCATAGTCTCCGTCTCTCGCCCCGATGCCGCTGACTTCAGCCCCATGCTTCTCTCTTACTTGATCGAGTTTCAACACAAGCAGTTCAAATGGCGCTTACTAAAGAAGGCTTCGCATGTATTTTATCTACACTTTGCCTTAAAGAAACGTGCATTTATTGAGGAAATCCAGGAGAAACAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGATCATGCAGCAGTTGTACAAGATGATGATGAACCCGATGATGAGGTTGTTCCCATTCACAGCGATGAAAGTGCTAAAAACAGAAATGTCCCATCCAGTGCTGTCTTACCGGTAATTCGACCTGCACTAGGAAGGCAGCATTCCATCTCAGAGAGAGCCAAGGTTGCAATGCAAGGCTACCTAAACCATTTCTTAGGGAATATGGACATTGTTAATTCGCGAGAGGTTTGCAGGTTTATGGAGGTTTCAAGGCTTTCATTTTCACCAGAGTATGGCCCTAAGTTAAAAGAAGATTATGTCATGGTGAAGCATCTCCCACCAATACCAAAGGATGATGATTCCAGAACGTGCTGTGCATGCAGTTGGTCTAGTTGTTGTAATGATAATTGGCAAAAGGTTTGGGCTGTACTAAAGCCTGGATTTCTAGCCTTGTTGGGAGATCCTTATGATATGCAACCATTAGATATTATTGTGTTTGATGTGCTACCATCCTCAGATGGAAATGGAGAAGGGCGGCTTGCACTAGCCAATGAAATTAAAGAAAGAAATCCTTTACGGCATGCATTTAAGGTTACTTGTGGCAACCGAAACATTAGGTTAAGAACAAAAGGTGGTGCTAAAGTTAAAGACTGGGTTGCTGCAATAAATGATGCAGGACTGAGGCCTCCTGAGGGTTGGTGTTACCCTCACCGCTTTGGTTCATTTGCTCCTCCCAGAGGTTTGATAGAAGATGGTAGTCAGGCTCAGTGGTTTGTCGATGGTGGAGCAGCATTTGAGGCTATTACTGCTTCAATTGAGGATGCAAAATCGGAGATTTTTATTTGTGGCTGGTGGGTCTGTCCAGAACTGTATCTACGGCGTCCATTTGATGCTCATGCATCATCAAGACTTGATGCTTTGCTAGAAGCCAAGGCCAAACAAGGGGTTCAGATCTATATTCTACTGTACAAGGAGGTTGCTATAGCTCTAAAGATCAACAGTGTATATAGCAAGAGAAAACTTCTTAGCATCCATGAGAATGTGAGAGTACTACGATATCCTGACCACTTTTCTTGTGGTGTCTACCTATGGTCCCACCATGAAAAAATTGTCATTGTTGATCATCAGATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGATATGACACACCTGAGCATAAAGTGGGAGATTTTCCACCATTGGTGTGGAAGGGAAAAGACTATTATAACCCTAGGGAATCTGAACCAAATTCATGGGAGGATACGATGAAAGATGAGTTGGATCGGGGAAAATATCCTCGTATGCCTTGGCATGATGTGCATTGTGCCCTATGGGGACCACCGTGCCGTGATGTAGCTAGGCATTTTGTCCAACGGTGGAATTATGCAAAGAGAAATAAAGCTCCCAATGAGCAAGCAATTCCACTACTTATGCCTCAGCACCACATGGTTATTCCACATTACTTGGGACAGAGTACAGAGTTGGAAGATGAACAGCAGAATTTAAATGCGTCGGAAGACAATAAAAAACTCGGTTCTTTTTCGTCTCGTTCCTCATTTCAAGATATTCCGTTGCTTTTGCCGCAAGAGGCTGATGGACTAGATTCTGAAATTGAAGATCCAAAGTCTAGAGGAGTAGACTCCGCTTCTAATTTTCATAGTCAGGCCATCAAGGCTAATGGTAGTCTTGCTTTTCCTTTTCGGAAGTCTAAAGGTGATCAACTTGGTACGGCTTTGCCAATGAAAGGCTTTGTTGATGATTTTGACACTTCAGATTGCCATGGGAAAATGTTGGGAGAGGGAGTAGGACAAAATGGCATAAGAAATTCAGATCCGGAATGGTGGGAAACACAAGAGAGGGGTGATCAAGGTGGTTTGATGAATGAATGTGGACAAGTTGGTCCTCGTTCCTCATGTCGCTGTCAGGTTATTAGAAGTGTCAGTCAATGGTCTGCTGGAACAAGCCAAACTGAAGAGAGCATTCACATTGCTTATTGTTCTCTTATAGAAAAAGCAGAACATTTTATTTATATCGAGAATCAATTTTTCATATCAGGTCTTTCTGGGGATGAGATAATACGCAACCGTGTCTTAGAAGTACTTTTTCGTCGTATTATGAGAGCTTACAGTGATCAGAAGATTTTTAGGGTTATTGTTATTATACCACTTTTACCAGGTTTCCAGGGAGGTCTGGATGATAGCGGTGCAGCATCGGTGAGAGCCATAATGCATTGGCAGTACCGAACAATATGTAGAGGAAATAGTTCCATACTGCATAATTTGTATGATCTTCTTGGTTCTAAAGCCCATGATTACATTTCTTTCTATGGTGTCAGAGCTTATGGCAGACTTTATGACGGTGGTCCAGTGGCCTCAAGTCAGGTTTACGTTCATAGCAAAATCCTCATTGTTGACGATTCTACTGCATTGATTGGATCTGCTAACATTAATGATAGGAGTTTACTTGGTTCGAGGGATTCTGAGATTGGTATCGTTATCGAAGACAAAGAGCTAGTTACTTCTCAAATGGGAGGACAACCATGGCAANTTATAACCTTAATCATTACATGCTTATATTAA 2931 42.61 MASEQLMSGSGPRYVQMQSEPLSVMPSSFFSSRQGALESSRIFDELPRATIVSVSRPDAADFSPMLLSYLIEFQHKQFKWRLLKKASHVFYLHFALKKRAFIEEIQEKQEQVKEWLQNLGIGDHAAVVQDDDEPDDEVVPIHSDESAKNRNVPSSAVLPVIRPALGRQHSISERAKVAMQGYLNHFLGNMDIVNSREVCRFMEVSRLSFSPEYGPKLKEDYVMVKHLPPIPKDDDSRTCCACSWSSCCNDNWQKVWAVLKPGFLALLGDPYDMQPLDIIVFDVLPSSDGNGEGRLALANEIKERNPLRHAFKVTCGNRNIRLRTKGGAKVKDWVAAINDAGLRPPEGWCYPHRFGSFAPPRGLIEDGSQAQWFVDGGAAFEAITASIEDAKSEIFICGWWVCPELYLRRPFDAHASSRLDALLEAKAKQGVQIYILLYKEVAIALKINSVYSKRKLLSIHENVRVLRYPDHFSCGVYLWSHHEKIVIVDHQICFIGGLDLCFGRYDTPEHKVGDFPPLVWKGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLGQSTELEDEQQNLNASEDNKKLGSFSSRSSFQDIPLLLPQEADGLDSEIEDPKSRGVDSASNFHSQAIKANGSLAFPFRKSKGDQLGTALPMKGFVDDFDTSDCHGKMLGEGVGQNGIRNSDPEWWETQERGDQGGLMNECGQVGPRSSCRCQVIRSVSQWSAGTSQTEESIHIAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLEVLFRRIMRAYSDQKIFRVIVIIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGNSSILHNLYDLLGSKAHDYISFYGVRAYGRLYDGGPVASSQVYVHSKILIVDDSTALIGSANINDRSLLGSRDSEIGIVIEDKELVTSQMGGQPWQXITLIITCLY 976
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 766907 779633 - BLOR00062 Blo01g00062 54502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00062 976 MobiDBLite consensus disorder prediction 610 633 - -
Blo01g00062 976 MobiDBLite consensus disorder prediction 607 633 - -
Blo01g00062 976 MobiDBLite consensus disorder prediction 716 735 - -
Blo01g00062 976 Gene3D Endonuclease Chain A 364 609 - -
Blo01g00062 976 Coils Coil 98 118 - -
Blo01g00062 976 PIRSF PLD_euk 54 627 IPR016555 GO:0004630|GO:0006654|GO:0048017
Blo01g00062 976 PIRSF PLD_euk 603 970 IPR016555 GO:0004630|GO:0006654|GO:0048017
Blo01g00062 976 Pfam PLD-like domain 785 957 IPR025202 -
Blo01g00062 976 CDD PLDc_vPLD1_2_yPLD_like_2 770 954 - -
Blo01g00062 976 CDD PLDc_vPLD1_2_yPLD_like_1 370 514 - -
Blo01g00062 976 SUPERFAMILY PH domain-like 246 340 - -
Blo01g00062 976 PANTHER PHOSPHOLIPASE D 29 966 IPR015679 -
Blo01g00062 976 SUPERFAMILY Phospholipase D/nuclease 335 597 - -
Blo01g00062 976 SMART pld_4 477 504 IPR001736 GO:0003824
Blo01g00062 976 SMART pld_4 910 937 IPR001736 GO:0003824
Blo01g00062 976 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 910 937 IPR001736 GO:0003824
Blo01g00062 976 PANTHER PHOSPHOLIPASE 29 966 - -
Blo01g00062 976 CDD PH_PLD 193 340 - -
Blo01g00062 976 Gene3D Endonuclease Chain A 734 966 - -
Blo01g00062 976 Gene3D - 243 342 IPR011993 -
Blo01g00062 976 SUPERFAMILY Phospholipase D/nuclease 751 957 - -
Blo01g00062 976 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 477 504 IPR001736 GO:0003824
Blo01g00062 976 SMART PH_update 216 344 IPR001849 -
Blo01g00062 976 Pfam Phospholipase D Active site motif 477 504 IPR001736 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00062 Blo-Chr1:766907 Blo05g00698 Blo-Chr5:23774484 1.70E-06 dispersed
Blo01g00062 Blo-Chr1:766907 Blo11g00523 Blo-Chr11:4816981 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00062 K01115 - vvi:100261987 1598.56