Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00064 ATGACGTTTGGAGGTTTTAACAATGCCGACAAAGACAAGAACAAGAAGAAGATCGCCGTTATCGGGGTCTCTTCTCTTATTTTGGTAGCTATGGTTGTCGCTGTTGCCGTCGGCATTGGCCGTGGCTCCGGCGAATCGTCAACAGCCGAAAATTCTCCTCCCGCGGCGGAAGAAGTTTCCACGTCGGAGAAGGCGATCAAGGCAATCTGTCAGCCAACGGATTACCGAGAAACCTGCGAGGAAAGCCTTTCAGCTGCCGCCGGAAATACCAGCGATCCGAGAGAGCTCGTGAAAGCTGGGTTTAAGGTCGCCATTGGCGAGCTAACAGCCGCCCTTAGGAACTCGACGACCTTGCAAGAGCTTGCAAAAGAACCAAGAACTAATCAGGCTCTTCAAAACTGTCGCGAGCTGATCCAATACGCGATTGACGACCTCAACGAATCTTTCACACGAATCGGAGCCTTCGAGATTGCCAAACTCGACGACTACATCGAAGACCTAAAAGTCTGGCTGAGCGCCTCCCTCACATATGAGCAGACATGCTTGGACGGATTCGAAAACACCACCGGCGACGCAGGAGAGCAGATGAAGGCCATTCTGAAGAAATCGCAGCATCTTACCAGCAATGGGTTGGCAATGGTGACGGAAATCTCCTCCATTTTGGCCTCCTTCCAGATATCCACAACAAGCAGAAGGCTTCTTAATGAAAACCCCGGAGAGGAGCCGGAGTGGGTGGACGAGGGAAAGAGGATCCTTTTGCAGGCTACTACGGCTACCGTGAAAGCAGACGTGGTGGTGGCGAAGGATGGAAGTGGGAAGTATAAGACGGTGAACGAGGCGTTGAAGGACATACCAGAGAAGAATACCAAGACTTTTGTGATACACGTGAAGGCCGGAGTTTACAACGAGAATGTGATGATCGATAAGGGTATGACCCATGTTATGTTGATCGGAGATGGACCGACAGCCACTAAAATTACCGGCAGTAAGAATTTTATTGATGGAACTCCTACATTCAAGACTGCAACTGTTTCTGTGATCGGAAACAATTTCATTGCCAAGAACATCGGATTCGAGAATTCCGCCGGAGCTGAAAAGCACCAAGCGGTGGCGCTCCGAGTTCAGTCCGACATGTCCATCTTCTACAACTGCCAAATGGACGGATATCAAGACACTCTCTACACCCACACTAACCGCCAATTCTACCGCGACTGCACAATCTCCGGCACCATTGACTTCATCTTCGGCAACGGTGCCGTCGTTCTGCAGAACTGCAAAATGGTCGTCCGGAAGCCACTGGAAAACCAGCAGTGCATCGTCACCGCCCAGGGAAGACTCGACCGCCGAGAACCCACAGCTCTGATTCTCCAAAACTGCATCATCACTTCGGACCCAGCTTACTACCCTTTCCGCAATCAAAACAAAGCTTACCTTGGTCGACCATGGAAAGAGTATTCGAGAACCATAATCATGCAGTCTCAGATAGAGGATTTGATTCAGCCGGATGGATGGTTACCATGGATGGGAGATTTCGCCCTGAAAACTTGCTTCTATGCAGAGGTTGATAATCGAGGCCCTGGTTCAGTGAAGACGAATAGAGTGAAATGGAGAGGAATCAAGAAGATAACTTCTCAACATGCAGTGAAATTCACAGCAGAAAGGTTCATTCAGGGAAATCAATGGATAAAAGCCGCTGGAGTGCCTTATTCTCCTGGAATGATAGCCGTATAG 1731 49.68 MTFGGFNNADKDKNKKKIAVIGVSSLILVAMVVAVAVGIGRGSGESSTAENSPPAAEEVSTSEKAIKAICQPTDYRETCEESLSAAAGNTSDPRELVKAGFKVAIGELTAALRNSTTLQELAKEPRTNQALQNCRELIQYAIDDLNESFTRIGAFEIAKLDDYIEDLKVWLSASLTYEQTCLDGFENTTGDAGEQMKAILKKSQHLTSNGLAMVTEISSILASFQISTTSRRLLNENPGEEPEWVDEGKRILLQATTATVKADVVVAKDGSGKYKTVNEALKDIPEKNTKTFVIHVKAGVYNENVMIDKGMTHVMLIGDGPTATKITGSKNFIDGTPTFKTATVSVIGNNFIAKNIGFENSAGAEKHQAVALRVQSDMSIFYNCQMDGYQDTLYTHTNRQFYRDCTISGTIDFIFGNGAVVLQNCKMVVRKPLENQQCIVTAQGRLDRREPTALILQNCIITSDPAYYPFRNQNKAYLGRPWKEYSRTIIMQSQIEDLIQPDGWLPWMGDFALKTCFYAEVDNRGPGSVKTNRVKWRGIKKITSQHAVKFTAERFIQGNQWIKAAGVPYSPGMIAV 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 789868 791749 + BLOR00064 Blo01g00064 54504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00064 576 TIGRFAM PME_inhib: pectinesterase inhibitor domain 59 216 IPR006501 GO:0004857
Blo01g00064 576 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Blo01g00064 576 SUPERFAMILY Pectin lyase-like 257 572 IPR011050 -
Blo01g00064 576 Pfam Pectinesterase 263 559 IPR000070 GO:0030599|GO:0042545
Blo01g00064 576 CDD PMEI-like_3 68 219 - -
Blo01g00064 576 ProSitePatterns Pectinesterase signature 1. 288 307 IPR018040 -
Blo01g00064 576 MobiDBLite consensus disorder prediction 44 58 - -
Blo01g00064 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 218 IPR035513 -
Blo01g00064 576 Pfam Plant invertase/pectin methylesterase inhibitor 65 213 IPR006501 GO:0004857
Blo01g00064 576 MobiDBLite consensus disorder prediction 42 63 - -
Blo01g00064 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 218 IPR035513 -
Blo01g00064 576 SMART PMEI_2 61 213 IPR006501 GO:0004857
Blo01g00064 576 PANTHER PECTINESTERASE 18 573 - -
Blo01g00064 576 PANTHER PECTINESTERASE 18 573 - -
Blo01g00064 576 Gene3D - 256 573 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00064 Blo-Chr1:789868 Blo10g00373 Blo-Chr10:6186853 0 dispersed
Blo01g00064 Blo-Chr1:789868 Blo17g00653 Blo-Chr17:15444902 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00064 K01051 - mnt:21390602 804.283