Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00088 ATGGGAAACGAATTGAGCTCCGATCACACTTCCGTGGTTTCGATGAACTTATTCGTTTCTCTTCTTTGCGCCTGCATTGTTATCGGCCATTTTCTTGAGAAAAATCGTTGGTTCAATGAGTCTATTACGGCTCTCATTATTGGTTTATGCACTGGGGTGGTTATATTGCTTACGACCAGAGGAAAAAGCTCACGTTTGTTAGTGTTCAGTGAAGATCTTTTCTTCATCTATCTTCTTCCCCCCATAATATTCAATGCTGGGTTCCAGGTGAAGAAGAAGCAATTTTTCCTCAACTTTATGACTATCATGCTCTTTGGAGCATTTGGCACTCTCATATCCTTTGGAATTATATCATCAGGTGCCTTCCACTTTTTTCGGAAAATAGGAATTAGTTCACTTGAGATTACCGATTATCTAGCAGTTGGCACCATATTTTCTGCAACCGATTCAGTTTGCACTCTGCAGGTTCTCAATCAGGATGAGACTCCCTTTCTCTACAGCTTGGTTTTTGGGGAAGGGGTTGTTAATGATGCTACATCAGTGGTGCTATTCAATGCTATTCAGAAGTTTGATCTCACTCACATCAATTCAAGCATAGTTTTGCAATTTATTGCCAACTTCTTGTATTTATTTATCGCAAGCACAATGTTGGGTTTCTTGGCTGGTCTGATTAGTGCATACACAATTAAGAAGCTCTACTTTGGCAGACATTCTACTGATCGTGAGGTGGCACTGATGATACTCATAGCATATCTCTCATATGTGTTGGCTGAGCTCTTTAACTTGAGCGCGATTCTTACCGTGTTCTTTTGCGGTATTGTCATGTCACATTACACCTGGCATAATGTGACTGAAAGTTCAAGGGTGACCAGTAAGCATGCATTTGCTACTCTGTCGTTGGTGGCTGAGATTTTTATCTTCCTTTACGTTGGCATGGATGCCTTGGACATTGAGAAGTGGAGATATGTGAGCCACAGTCCTAGGAAATCCATTGGAGTGAGTTCAATATTGCTGGGACTTGTTCTGGTTGGAAGGGCAGCTTTTGTTTTTCCTCTTTCCCTCTTATCCAATTTGACCAAGAAGTCGTCATATGAGAAAATTGATTTAAAGCAACAATTCACAATTTGGTGGGCCGGTCTTACGCGTGGTGCAGTTTCCATGGCACTGTCATATAATCAGTTTAGCAGGTCAGGTCACACCCAATTACGTAGGAATGCATTCATGATTACTAGCACTATAACAGTTGTTCTTTTCAGCACCATGGTGTTTGGATTGATGACAAAACCTTTAGTTAGAATTTTGCTTCCTCCTTCAAAACAAACAAGCAGTGTGCTTTCTGAACCATCTACTCCTAAATCCTTTACTCTCCCACTTCTTTGCAATGGGAACAGTTCAGCAAGTGGTGATAATTGCAGCCAAACTTGGAGCTTGTGGATGATTTTTAGCATACCTACTCGATCAGTACACCATTACTGGCGAAGTTTTGACGATGCTTTTATGCGCCCGGTTTTCGGAGGGAGAGGGTTCGTGCCGTTTATTCCTGCCTCGCCAACTGATATAGGCGACCTACAATGGCAGTGTGAGGGAGTACAGATTGAAGACATTTTCATGATTGCATTAAGTTTGTCAGTGAAATTGTACATTTTATGGCTCATGGATTTGTAA 1665 41.44 MGNELSSDHTSVVSMNLFVSLLCACIVIGHFLEKNRWFNESITALIIGLCTGVVILLTTRGKSSRLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFLNFMTIMLFGAFGTLISFGIISSGAFHFFRKIGISSLEITDYLAVGTIFSATDSVCTLQVLNQDETPFLYSLVFGEGVVNDATSVVLFNAIQKFDLTHINSSIVLQFIANFLYLFIASTMLGFLAGLISAYTIKKLYFGRHSTDREVALMILIAYLSYVLAELFNLSAILTVFFCGIVMSHYTWHNVTESSRVTSKHAFATLSLVAEIFIFLYVGMDALDIEKWRYVSHSPRKSIGVSSILLGLVLVGRAAFVFPLSLLSNLTKKSSYEKIDLKQQFTIWWAGLTRGAVSMALSYNQFSRSGHTQLRRNAFMITSTITVVLFSTMVFGLMTKPLVRILLPPSKQTSSVLSEPSTPKSFTLPLLCNGNSSASGDNCSQTWSLWMIFSIPTRSVHHYWRSFDDAFMRPVFGGRGFVPFIPASPTDIGDLQWQCEGVQIEDIFMIALSLSVKLYILWLMDL 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1199412 1203353 - BLOR00088 Blo01g00088 54528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00088 554 PANTHER SODIUM/HYDROGEN EXCHANGER 3 4 525 - -
Blo01g00088 554 PANTHER SODIUM/HYDROGEN EXCHANGER 4 525 IPR018422 GO:0006812|GO:0015299|GO:0016021
Blo01g00088 554 Pfam Sodium/hydrogen exchanger family 21 432 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Blo01g00088 554 Gene3D - 134 186 - -
Blo01g00088 554 PRINTS Na+/H+ exchanger signature 87 101 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Blo01g00088 554 PRINTS Na+/H+ exchanger signature 102 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Blo01g00088 554 PRINTS Na+/H+ exchanger signature 73 84 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Blo01g00088 554 PRINTS Na+/H+ exchanger signature 142 152 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00088 Blo-Chr1:1199412 Blo05g00328 Blo-Chr5:3757500 0 dispersed
Blo01g00088 Blo-Chr1:1199412 Blo18g00584 Blo-Chr18:8744593 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00088 - - cpap:110819963 816.609