Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo01g00088 | ATGGGAAACGAATTGAGCTCCGATCACACTTCCGTGGTTTCGATGAACTTATTCGTTTCTCTTCTTTGCGCCTGCATTGTTATCGGCCATTTTCTTGAGAAAAATCGTTGGTTCAATGAGTCTATTACGGCTCTCATTATTGGTTTATGCACTGGGGTGGTTATATTGCTTACGACCAGAGGAAAAAGCTCACGTTTGTTAGTGTTCAGTGAAGATCTTTTCTTCATCTATCTTCTTCCCCCCATAATATTCAATGCTGGGTTCCAGGTGAAGAAGAAGCAATTTTTCCTCAACTTTATGACTATCATGCTCTTTGGAGCATTTGGCACTCTCATATCCTTTGGAATTATATCATCAGGTGCCTTCCACTTTTTTCGGAAAATAGGAATTAGTTCACTTGAGATTACCGATTATCTAGCAGTTGGCACCATATTTTCTGCAACCGATTCAGTTTGCACTCTGCAGGTTCTCAATCAGGATGAGACTCCCTTTCTCTACAGCTTGGTTTTTGGGGAAGGGGTTGTTAATGATGCTACATCAGTGGTGCTATTCAATGCTATTCAGAAGTTTGATCTCACTCACATCAATTCAAGCATAGTTTTGCAATTTATTGCCAACTTCTTGTATTTATTTATCGCAAGCACAATGTTGGGTTTCTTGGCTGGTCTGATTAGTGCATACACAATTAAGAAGCTCTACTTTGGCAGACATTCTACTGATCGTGAGGTGGCACTGATGATACTCATAGCATATCTCTCATATGTGTTGGCTGAGCTCTTTAACTTGAGCGCGATTCTTACCGTGTTCTTTTGCGGTATTGTCATGTCACATTACACCTGGCATAATGTGACTGAAAGTTCAAGGGTGACCAGTAAGCATGCATTTGCTACTCTGTCGTTGGTGGCTGAGATTTTTATCTTCCTTTACGTTGGCATGGATGCCTTGGACATTGAGAAGTGGAGATATGTGAGCCACAGTCCTAGGAAATCCATTGGAGTGAGTTCAATATTGCTGGGACTTGTTCTGGTTGGAAGGGCAGCTTTTGTTTTTCCTCTTTCCCTCTTATCCAATTTGACCAAGAAGTCGTCATATGAGAAAATTGATTTAAAGCAACAATTCACAATTTGGTGGGCCGGTCTTACGCGTGGTGCAGTTTCCATGGCACTGTCATATAATCAGTTTAGCAGGTCAGGTCACACCCAATTACGTAGGAATGCATTCATGATTACTAGCACTATAACAGTTGTTCTTTTCAGCACCATGGTGTTTGGATTGATGACAAAACCTTTAGTTAGAATTTTGCTTCCTCCTTCAAAACAAACAAGCAGTGTGCTTTCTGAACCATCTACTCCTAAATCCTTTACTCTCCCACTTCTTTGCAATGGGAACAGTTCAGCAAGTGGTGATAATTGCAGCCAAACTTGGAGCTTGTGGATGATTTTTAGCATACCTACTCGATCAGTACACCATTACTGGCGAAGTTTTGACGATGCTTTTATGCGCCCGGTTTTCGGAGGGAGAGGGTTCGTGCCGTTTATTCCTGCCTCGCCAACTGATATAGGCGACCTACAATGGCAGTGTGAGGGAGTACAGATTGAAGACATTTTCATGATTGCATTAAGTTTGTCAGTGAAATTGTACATTTTATGGCTCATGGATTTGTAA | 1665 | 41.44 | MGNELSSDHTSVVSMNLFVSLLCACIVIGHFLEKNRWFNESITALIIGLCTGVVILLTTRGKSSRLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFLNFMTIMLFGAFGTLISFGIISSGAFHFFRKIGISSLEITDYLAVGTIFSATDSVCTLQVLNQDETPFLYSLVFGEGVVNDATSVVLFNAIQKFDLTHINSSIVLQFIANFLYLFIASTMLGFLAGLISAYTIKKLYFGRHSTDREVALMILIAYLSYVLAELFNLSAILTVFFCGIVMSHYTWHNVTESSRVTSKHAFATLSLVAEIFIFLYVGMDALDIEKWRYVSHSPRKSIGVSSILLGLVLVGRAAFVFPLSLLSNLTKKSSYEKIDLKQQFTIWWAGLTRGAVSMALSYNQFSRSGHTQLRRNAFMITSTITVVLFSTMVFGLMTKPLVRILLPPSKQTSSVLSEPSTPKSFTLPLLCNGNSSASGDNCSQTWSLWMIFSIPTRSVHHYWRSFDDAFMRPVFGGRGFVPFIPASPTDIGDLQWQCEGVQIEDIFMIALSLSVKLYILWLMDL | 554 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1199412 | 1203353 | - | BLOR00088 | Blo01g00088 | 54528 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo01g00088 | 554 | PANTHER | SODIUM/HYDROGEN EXCHANGER 3 | 4 | 525 | - | - | |
Blo01g00088 | 554 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 4 | 525 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Blo01g00088 | 554 | Pfam | Sodium/hydrogen exchanger family | 21 | 432 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Blo01g00088 | 554 | Gene3D | - | 134 | 186 | - | - | |
Blo01g00088 | 554 | PRINTS | Na+/H+ exchanger signature | 87 | 101 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Blo01g00088 | 554 | PRINTS | Na+/H+ exchanger signature | 102 | 110 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Blo01g00088 | 554 | PRINTS | Na+/H+ exchanger signature | 73 | 84 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Blo01g00088 | 554 | PRINTS | Na+/H+ exchanger signature | 142 | 152 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00088 | Blo-Chr1:1199412 | Blo05g00328 | Blo-Chr5:3757500 | 0 | dispersed | |
Blo01g00088 | Blo-Chr1:1199412 | Blo18g00584 | Blo-Chr18:8744593 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo01g00088 | - | - | cpap:110819963 | 816.609 |