Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00090 ATGGATTCGGTGAGGCGTTGGTTCAATAAGTTTAAGTCCAAAGACAAGTCGAAGTCTCCAAAGAAGAAAGAGGCAACAAGTGGGAAGGAGCCATTAAAAGCTCCAACTACTGAGGAAATACCTTCAAATGTAACCAAACAGAAGGTTGCAGCTGCAAAGCAGTATATTGAAAACCATTATAAGAAGCAAATGAAGAACTTGCAGGAAAGGAAGGACAGGCGTGATTTATTAGAAAAAAAATTGGCAGATGCTGAGGTTTCTGAAGACGAGCTAAACAACTTGCTTAAATACTTAGAGAAGAAGGAGACTGAATATATGCGTATTCAGAGGCATAAAATGGGTGCTGATGACTTTGAGCCTTTGACTATGATAGGGAAGGGTGCATTTGGAGAGTCTCATTTTATATATTTAGTTCTCCGTCAAAATAAACTACTGGGATGTCATTTACTCATTGGGACTTTTGGCTGCCATCTTGATTTTAGCTTTCTTTCTTCCTTTAGACAGTGTTTTTGTGTACTTGTTAGAGTCTGTAGAGAGAAGGCCACGGGTCATGTCTATGCTATGAAGAAGCTTAAAAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAACATGTGAAAGCAGAGAGGAATCTACTTGCAGAGGTTGATAGCAATTGTATTGTGAAGCTGTACTGTTCCTTCCAAGATGAGGAATATTTATATCTAGTTATGGAATACCTACCTGGGGGAGATATGATGACTTTACTTATGCGGAAGGATATACTTACAGAAGATGAGGCCAAGTTTTATGTTGGGGAAACTGTTCTAGCTATTGAATCCATTCATAAACATAATTATATTCACAGAGATATCAAGCCTGACAACTTACTACTAGATAGAACTGGTCATATGAAACTATCAGATTTTGGATTATGTAAACCATTGGACTGTTCTAACCTCCAAGAAAAGGACTTTTCTATTGGAAACAACCTTAGTGGAGCCCTTCAAAGTGATGGGCGCCCTGCAATACCAAAACGGACACAGCAAGAACAACTGCAGCACTGGCAACGAAACAGGAGGATGCTAGCCTATTCGACTGTTGGAACTCCTGACTACATTGCCCCAGAAGTTTTGCTGAAGAAAGGATATGGAATGGAGTGTGATTGGTGGTCTCTTGGAGCTATCATGTATGAAATGCTTGTTGGGTACCCACCTTTTTATTCAGATGAACCAATGTCCACTTGTAGGAAGATAGTCAATTGGAAGACTCACTTAAAATTTCCAGAGGAAGCAAAACTCTCTCTGGAAGCAAAGGATCTAATAAGTAAACTTTTGTGCAATGTTGACCAGAGACTGGGAACAAAAGGGGCTGATGAAATAAAGGCTCACCCGTGGTTCAAGGGCATTGAATGGGATAAATTATATCAAATGAAAGCTGCATTTATTCCGGAAGTCAATGATGAACTGGATACTCAAAATTTTGAGAAATTTGAAGAGGTTGAAAACCAAATCCAGACATCATCAAAATCAGGGCCGTGGAGAAAGATGCTCTCATCTAAGGATATTAACTTCGTGGGTTACACTTACAAGAACTTTGAAATTGTCAATGACCATCAGATACCTGGCATTGCTGAACTCAAGAAGAAGAGCACAAAACCTAAGAGACCTTCCATCAAAAACCTCTTTGATGATGAATCGGCCATGGGTGCCAATCACTCGGTCCAGGGAAGTTTTTTGAAGCTCTTGCCTCCCCAGTTGGANACCGTTGCAGCGGAGTTGAGAATTCAACAATTATTAGAGGGGGCTGACTTAGCCGGTTTGTGCAGAATGGGAGGGAGTTATTGTGAGCGGATTGTGAGGCTATTTTATGCTAATTTGGAAGTGTCCATGCAGCCATTAGAGGTCTGCACTAATATGTTTGGACGGCAGTTAAGGCTGACTCTCAACGATCGGAACGTGATGCTTGGATGTGTGATGGAGGGGCCAAACGATCAGTATTACCACGTGTCTTGGGAGCCACTTTTCGTCAAGCAAGGAGATGGGTTGGCAGTGCTTAAATTGTTGCACCGGGATCCCGAGATTAATGCGTACAAGAAGCCAAAGGACAGGGAGCTAAATGCCATAGCCATAGTCATCCACATCATCATGGCATACATCATTTTGCCTCGGGATGGACATCGAGACCATGTTAGTTGCATGGATCTCTATTTGCTCGAGAAGGTGTTCACCAAAAAAAGGTGA 2220 41.62 MDSVRRWFNKFKSKDKSKSPKKKEATSGKEPLKAPTTEEIPSNVTKQKVAAAKQYIENHYKKQMKNLQERKDRRDLLEKKLADAEVSEDELNNLLKYLEKKETEYMRIQRHKMGADDFEPLTMIGKGAFGESHFIYLVLRQNKLLGCHLLIGTFGCHLDFSFLSSFRQCFCVLVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLVMEYLPGGDMMTLLMRKDILTEDEAKFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRTGHMKLSDFGLCKPLDCSNLQEKDFSIGNNLSGALQSDGRPAIPKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWKTHLKFPEEAKLSLEAKDLISKLLCNVDQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVENQIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIVNDHQIPGIAELKKKSTKPKRPSIKNLFDDESAMGANHSVQGSFLKLLPPQLXTVAAELRIQQLLEGADLAGLCRMGGSYCERIVRLFYANLEVSMQPLEVCTNMFGRQLRLTLNDRNVMLGCVMEGPNDQYYHVSWEPLFVKQGDGLAVLKLLHRDPEINAYKKPKDRELNAIAIVIHIIMAYIILPRDGHRDHVSCMDLYLLEKVFTKKR 739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1250067 1255687 - BLOR00090 Blo01g00090 54530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00090 739 Gene3D Transferase(Phosphotransferase) domain 1 244 321 - -
Blo01g00090 739 Pfam Protein kinase C terminal domain 478 522 IPR017892 GO:0004674|GO:0005524|GO:0006468
Blo01g00090 739 ProSiteProfiles AGC-kinase C-terminal domain profile. 460 532 IPR000961 GO:0004674|GO:0005524|GO:0006468
Blo01g00090 739 SUPERFAMILY Protein kinase-like (PK-like) 94 512 IPR011009 -
Blo01g00090 739 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 131 - -
Blo01g00090 739 PANTHER SERINE/THREONINE-PROTEIN KINASE 174 562 - -
Blo01g00090 739 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 174 562 - -
Blo01g00090 739 Gene3D Phosphorylase Kinase; domain 1 478 488 - -
Blo01g00090 739 Coils Coil 60 104 - -
Blo01g00090 739 Gene3D Phosphorylase Kinase; domain 1 171 243 - -
Blo01g00090 739 MobiDBLite consensus disorder prediction 1 45 - -
Blo01g00090 739 ProSiteProfiles Protein kinase domain profile. 118 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00090 739 Pfam Protein kinase domain 174 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00090 739 CDD STKc_NDR_like 116 523 - -
Blo01g00090 739 SMART serkin_6 118 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00090 739 Gene3D Transferase(Phosphotransferase) domain 1 358 477 - -
Blo01g00090 739 Gene3D Phosphorylase Kinase; domain 1 57 144 - -
Blo01g00090 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Blo01g00090 739 SMART pkinase_C_6 460 524 IPR000961 GO:0004674|GO:0005524|GO:0006468
Blo01g00090 739 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 37 131 - -
Blo01g00090 739 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00090 Blo-Chr1:1250067 Blo14g00435 Blo-Chr14:5008763 1.63E-07 dispersed
Blo08g00210 Blo-Chr8:2466057 Blo01g00090 Blo-Chr1:1250067 1.28E-29 dispersed
Blo14g00511 Blo-Chr14:7094929 Blo01g00090 Blo-Chr1:1250067 1.85E-33 dispersed
Blo01g00090 Blo-Chr1:1250067 Blo06g00514 Blo-Chr6:27285544 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84065 PF00069 Pkinase 2.20E-59 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00090 K08790 - qsu:112030601 961.829