Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00102 ATGGCAGAATTTGAGGTTCCACCCTCCCCTCCCGCTTCTCCGGTCGCCGGCAGTGGCATTACACTACTAGGAAAATACCAGCTCGGTCGCTTCCTCGGCCGTGGTAGCTTTGCCAAAGTCTACCAGGCTCGCTCTCTTATCGACGGCTCCACCGTCGCCGTCAAAGTCATCGACAAGATCAAAACCGTTAACGCTGCAATGGAATCAAGGATAGTCCGAGAAATCGACGCTATGAGACGCCTTCACCACCACCCTAACATTCTCAAGAACCATGAAGTCATGGCTACCAAATCGAAGATTTACCTCGTCCTCGAGTTCGCTTCAGGCGGTGAACTTTTTGCCAAGATATCTCGCCGCGGCCGGCTCTCGGAGTCCGCCGCTCGGCGGTACTTTCAGCAGCTCGTATCTGCTCTTGATTTCTGTCACAAGAATGGCGTCGCTCATCGAGACGTGAAACCTCAGAATCTCCTCCTCGATAAGGATGGTAATTTGAAAGTCTCTGATTTTGGCCTCTCAGCGTTACCGGAGCAGCTTCAGAACGGCTTGCTCCATACCGCCTGCGGCACTCCAGCATACACCGCGCCGGAAGTTGTCTCCCGGCAAGGCTACGACGGTTCAAAAGCTGATGCTTGGTCCTGTGGTGTCATCCTCTTCGTCTTACTTTCCGGTTACCTCCCGTTCGATGATAGTAATATTGCAACAATGTATAAGAAAATTTACAGGCAAGATTATCAATTTCCGGACTGGATTTCAAAGCCAGCGAAGAACCTAATAATTCAGCTCCTCAATCCGAATCCAAAATCCAGGATGAGCATAGAAGCTCTCATGCAAAACTCCTGGTTCAAAAAATCCATCCTATCGAAGCTTCAGAAAGACAGCGAAGAAGACAATTCTCTCACGGAATCGCTTCAGAATTGTAAACTGGAGAACAACGTTCCGGTGATGAACGCATTCGACATAATTTCGATGTCATCAGGGCTGGATCTATCAGGGCTATTCGAAGTGGCGACAAAGCAGAACGAGAAGAGATTCACAACGAAATTCACGGCGGACGAGGTGGAGGAGAAAGTGAAAGTGATTGGAGGCGAAATGGGGTTCCGAGTGAACAGACTGGGGAAAAACAGGTCGATCAGGATGGGAAAGGGGAGGGTGGTTTTGACGGTGGATGTTTCGGAAGTGGCGCCGAGCCTGTTGATGGTGGAGATGAAGGTGGTGGAAGCAGAGGTAGAGTTTGAGAAGTTCCAATGGAGGGATATGAAAACCAAGCTTCAAGACATTGTAGTTTCATGGCACACTGCAACGAATAATGACCAAGAAGATGACTCTTAG 1329 49.51 MAEFEVPPSPPASPVAGSGITLLGKYQLGRFLGRGSFAKVYQARSLIDGSTVAVKVIDKIKTVNAAMESRIVREIDAMRRLHHHPNILKNHEVMATKSKIYLVLEFASGGELFAKISRRGRLSESAARRYFQQLVSALDFCHKNGVAHRDVKPQNLLLDKDGNLKVSDFGLSALPEQLQNGLLHTACGTPAYTAPEVVSRQGYDGSKADAWSCGVILFVLLSGYLPFDDSNIATMYKKIYRQDYQFPDWISKPAKNLIIQLLNPNPKSRMSIEALMQNSWFKKSILSKLQKDSEEDNSLTESLQNCKLENNVPVMNAFDIISMSSGLDLSGLFEVATKQNEKRFTTKFTADEVEEKVKVIGGEMGFRVNRLGKNRSIRMGKGRVVLTVDVSEVAPSLLMVEMKVVEAEVEFEKFQWRDMKTKLQDIVVSWHTATNNDQEDDS 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1419468 1420796 - BLOR00102 Blo01g00102 54542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00102 442 Pfam NAF domain 314 369 IPR004041 GO:0007165
Blo01g00102 442 CDD CIPK_C 316 420 - -
Blo01g00102 442 Gene3D Transferase(Phosphotransferase) domain 1 109 310 - -
Blo01g00102 442 Gene3D Kinase associated domain 1, KA1 311 429 - -
Blo01g00102 442 PANTHER SERINE/THREONINE KINASE 17 433 - -
Blo01g00102 442 ProSiteProfiles Protein kinase domain profile. 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00102 442 SMART serkin_6 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00102 442 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 17 433 - -
Blo01g00102 442 Pfam Protein kinase domain 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00102 442 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Blo01g00102 442 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Blo01g00102 442 SUPERFAMILY Protein kinase-like (PK-like) 23 296 IPR011009 -
Blo01g00102 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Blo01g00102 442 Gene3D Phosphorylase Kinase; domain 1 22 108 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00102 Blo12g00351 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00102 Blo-Chr1:1419468 Blo11g00700 Blo-Chr11:8260763 2.45E-136 dispersed
Blo01g00102 Blo-Chr1:1419468 Blo12g00351 Blo-Chr12:19549829 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84066 PF00069 Pkinase 2.10E-72 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00102 K12761 - csv:101215156 573.548