Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00128 ATGGATAGAAACAGAGAAGCTAGGAGGTCTACGATGGCGGCGGCGAATGGGTTATCAAGACGAAGACACAGAACTAACAGTCTCAGAGAGTCTCCGGAGGAAGATGTAACGGTGGAGTTGCAGGAGACGGCGAGGCTCAGAGATCGAGGAAGCGGGAAGAAAGATCGAGACCGTGAGAGGGATCGTCTTAGTCGGAGCAAGAGGAGGAGAGCGGACAGATTAATGCATGGGAGTAATCGGGAAGATGTTGGGGAAGAGAGTTCAGAAGAGAGTGTAAATGACGAAGAAGACGATGAAGACGAAGACTGTGGCGGTACGGTGAGAATGCTTCCTCCCAATCCTTCGTCGATGCCGTTGATTTCTAATCAGCGGAAAACCTTTCCTCCGGCGAAGACTTTCCGAACAGCCGCAACGTGGAAAGCGGCCGACGAAATGATCGGTGTATCAGTTCCAAGAAAAGCGCGCTCAGTTTTTACGAAGAGGACCCACGACTCATGGACTCCAACAGCCGGGGTTGGCAGCGTAGAGCTAATTCACCGGCAGGCTTCGACGTCTCCGGTGAGACCAAGCATCGGTCTTGCTACGGCGTCTCTAGCTCCGGCGTCACCTTCTTCATCTAATGCTTCGGCGAGGAAGAAGCCGAAGTCGAACGGACCGAAACTGCGGCCGCCGAAAGTTTCATCAAAGTCTTCTTCGGCTCAGGACGAGATCGAGATCGAGATAGCCGAGGTATTGTACGGAATGATGAGACAGCCTCAAGGGCCTTCTAAGCAAGACATCTCAGTCAGTGATTCGAGAGAAGTGAACAAATCGACGACGGACGCTAAATCTAGGGTTTCTTCTCCGATCTCGAATTCTTCCTCTGCTTTACCACTTCCGCCGTCGATTGTGACTCAAAATTCTGCTTCCATCGTCTCTTCAATAGCTGCGATTGCACCCAAAAGAAAAAGACCTCGACCCATCAAGTATGACGACGAGAACCCCTCGATTTTCAGTGGGAGGAATGGACCCATTTTCTCGACAACCAAACCCGAGACTGACCACTCATCGGTAACAGAGATTTCCTCTCATAATCTCAAAAAATATTCAGGATTCTTAGCTGAAAATGGCAGAGTTTCAGTCAATTCTGGAAGTTCTCAGGTTGCACCTGCCTCGTCGGAGGCGCAGATCGAACAGATTATGCCCGAAGTAAACGTATTGTCAGATTCAAAACCTTTGGTTGCAGAATCAAATGGTAAAGATTTGGGTGTGACGAAGGAGGAGCCTCAATCGCCTAAAAATGAAACTCCAGTTCTGATTTTGAATAATAACAATCAGGATGAGATGACTTCGACCGAGCCGCATTCATCCATGGCGGAACTTGAGAATCAGAGGGAAGAGAAGTTCCAAATAGATCTGATGGCTCCTCCATCGCGATCATCTCCAGAAAGAAATGGTGAGATTGATTTTGTGGCTGTAGATCTGAAATCTATGGTCACTGATGCAGAAATGGAAATAAAAAAGGCTAAGATAATGGAAGACGATAAAGCATCGAAAATAGGAAAAGAAGATGACGTTAACGTGGAGGCCAAAGCTAAATCTGAGGATGCCGATTCTAGAAATCATCTTGTTATGATTAGTAAAGACAGGCTTCCTCCCGATTTGGAGAAAACTGAAACAGAGACTGGCTATGGAGGTTTAAGCAATAATAAGCTAAACAGGCTTGCCCAGAAGCAGCACCAACCTTCATCAATCTCAGACAAATCTGGCCCAGCTAATTCTCTTCCTCTGCCCATGTCTGTCGCTGGCTGGCCGAGTGGGCTACCTCCCATGGGGTATGTGACTCCTCTGCAAGGAATTGTATCCATGGATGGAAGCTCTGTTACATCTACAGCAGCTATTCAACCGCCGAACTTACTTTTCCCTCCATCCCAGCCGAAGAGATGTGCAACCCATTGCTACATTGCTAGAAACATTTTTTATAATCAGCATATTGCTCGGATGAATCCATTCTGGCCGGCTGCCCCCAGCCCGGCATCGATGTTTGGGGCCAAGCACTGTAATTTGAATGTCTTACCCGCCTCGGATTTTCATGGAAATCTTCCAGGTAAGAGCCCGGGCTCTATGCAGGACAAAGCTCAGAGTCTACCCACTTTCTCTGCTCAATCTGGAAAGGACAATAAGTCTCCTCAACCAGCTGCCATTGTTGACGTTTCTCAGAGAAAGCAAATTCTAGTCCAGCAATCTTTACCTCCCGGAGCGGCTAGTAACATTCTGGGTCCGGCTTTTATCTTCCCGTTGAATCAACAACAGGCTGCAGCCGCATCCAGCCGACCTGGCTTGGTGAAATCTTTGACCGGCGGAGCTGTGTCCTCTGCTACTTCGGGTTCAGCTTCCATGAGTGGTTCTACTGGAGCTGCCATAGCAGGGCCTACTATGAGCTTCAATTATCCCAATATGCCAGTCAATGAGGCGCAGTACTTAGCCTTCTTGCAGAACAATGGCTATTCTTTCCCAATCCCGGCTCATGTTGGTGCCCCACCTGGATATAGAGGAGCTCATCCTCCTCCGGCAATACCTTTTTTTAACGGCTCATTCTATTCTTCTCAAATGATTCATCCTCAACCCTCCGGTCAGACACAGCTGAGTCAACAAGGTCCTCAAAGTTCTGCGGTTGCCAGCGGTGGTTCTTCAAATCATAAGCATTTACAGAGCCAGCAACAGAGATCCCATGCAGGTGGAGTTTATGGTGGTGGTGGAAATTTACAAGGCTTTCCTTCCAAAAACCAGGCCTCTCAACCACTGCAGCTGCCTCGCCCTCGGCAGCTTGAGGCCGAGATCGGTGGGGAAGAAAGCCCATCAACAGCTGATAGGGTTTCTCGATCGAATATGAATGTTTATGGTCAAAATTTCCCCATACCGATTCACCCCCCTAATTATACTGTGATTAATCCTCCTGTCCCAATTTCCGGCGGTGGTGAAAAGAAGCATTCTCAACAGCAGGGTGGCTCAAAAACAGGAGTCGAACCAGCTCAAGCCTTTGCCTTATCGATTACCTCCATTAATGGTGCTTCCACCACAACTGGAATTGATCTTTCGACGATTGCACCAAATCATCCTATGTCTCAGAACCTTCCAGAACTTACCAGACAGTCATATCAGTTTATGGCGGCTGCAACTGCAGCCCAGGCCGCACAGCCGAAGAAAAGCTACCCAGATGGAAATGGGGATAATTCTTTGAGTGTGGAGGAAGATAGAAAAATAATGGCGGCAAAAACTCCAACTCCGACAATGGTTCAGTCCATTGCTTTCTCCAGAACAGATTTATTGGATGCATCATCTGTTTCCACCATTCCGGGTGGGACTGCCATGGTTGATAGCTCAGCTCGAAGGCCTTCTGGCGGTGTTTATACCGATCATCTTCCATCTTCGTCCATGGCTGGAAAATTTCCTGATTCCTTGTCTTCATTTTCACAAAATCTAGTCCAAAGTAACACCAGCAGTCCAGCTCAATCTCCCCAGTGGAAGAATTCAGTGAGAGCATCAACTTCCCAGGTTCCTACTCAATCTGTCTCTTCAACTTCGTCTTCTACAAAGAATCTTCCTCAACAGCCGAACCGACCCCAGCAAAGCCACACACAGATTTCTTTTGCAGCAAATCCTAAATCTTCTTTGCAAAATCAAGCACAACAAGCTGTTAGTAGTAGCAGTCAAGCTCCATCTCCTCCATTAATGGTTGGCTCTCCAACCTCTTCCATCTCGAAGAGTTCAGGTGGAAGCCCAAGACTAGCTACTTCAACCACCACGGGAACCAAAACTGGCCAAGCTCCAATGATGTCATCTCAGCGAATCAAGAATTCCCAGCCATTGCCGACCCAGAAGTCGATTCTTGGAAATCCTCACGGCACCTCTTCATTGAGCTCTGGAGCCAAAACCCAGCAACAGCCTCAGCCACAGCATTTATCGAAGCAATCACTGCAACAAGCGCAGCTTTTCTTCTCTCACCCCTACATGCAGGCTCAAGCTTCTCATTCCACTAGCCCTTCAGCCACCTCAGCTGCTGGCGGGTATTATCTCCAAAGGCGGCGGCTGGAGCCACAACCAGTGGCTCCCCAGGGCCAATCATCGTCAACTTCAGGTGGAATGTTGTCGTTATGCTCTCCTATCACACTAGATCCAGCAAAAGTTGTGTCCGGAGCTTCAGCAGGGAACAACCCAAAAACAGGAGGTGGCTTACCCGCACAGACCGTTCTCCACTCGTCTCAGTTCTCTGCTTCACATTTGTCAGGAAATTCACCTCATTCTCTTCCGGCAGGTTTCCCATACATTCATGCTGTTTCCCCTGCAGCAGTTCAGATGAAGCCAACTGAAAAACAACCTGCGGGAGAGAGGGAGTATGTATGTACATGCCTAGCATATATAATGCAGACCTCAATTTTTCCCCAATTACTCAGCATTTTCCGGCCGATTAGTGTACCGTCTGCCCTTTCTAATTTTCTAAACGACGGAATTATTGATTGCGGTCCCATCCATCGATCGGAAAAGCCCTTGGTGGGTTGCCTCAAGGATGCAGCCATTGATATTGTTTGCATTGGAATGACAATGATGGTAGATACTGTGGCGAGACAAGGGGAGGTGGATACTGCTACCCTCTTTGATGGAGGAGCGACTTGTCCGGATGGAGGAGCTCCATCAAATGAGGCTGAACAAAATAAAAATAATGGAGGAGCACCATCAAATGAGGCTGCTCCAAATGCAAAAAATAGAGGAGCGAGCAGAAGAGCGCATCATAAGATGTTGATAGCATTGCAGAGAATGGGGCAGCGAGAAGCCCCTCCACCATCATCTCGAGCAACCCTTTCAGCAGCCTCTCCAGTGGCTTCTCCATCGTCCTCTTCAGTAACAGAAAGCACAAACTGCTTCACCATTGCCGTCAGTGGCAAACTTGCTCCTCCTGTCGTGCTTGCCAGGAGACAATGCGTAGGGTTTAGTCTTATGTTAAATAGGCGAACTGCTGCTGCCACTCCAGTGCCTCTGCCTGTTACCAGTGCTGAATCAAATTCGAAGCTGATTTTTGCTGCGGCTTGCGAGGTCATTGGTGTGGGTGGAGGTGGATCAAATGCTGTTAATTGCATGATAGAAAGTTCAATGAAGGTTGTGGAGTTCTGGATTGTCAACACAGATGTTCAAGCAATGAGGATGTCACCTGTCTATCCTGAGAACCGTCTTCAAATTGGGCAGGAGCTTACGAGAGGTCTTGGTGCTGGTGGGAACCCCGAGATTGACATGAATGTTGCCAAAGAAAGTAAACAATATATAGAAGAGGCATTATATGGATTAGACATGGTTTTTGTCACTGCTGGAATGGGTGGAGGAACCGGTAGTGGCGGTGCTCCCGTCATTGCAGGAGTTGCAAAGTCAATGGGTATTTTGATAATTGGTATTGTTACTGCCCCTTTTTCCTTTGAAGGAAGGAGGAGGACAGTTCAGGCACAGGAAGGAATTGCAGGATTAAGAGACAGTGTCAACACGCTGATTGTCATTCCAAATGACAAGTTAACTGATGGATCTTTTCAAGAAGCTTGTTGTTGGAAATACTTGGAAGAATTTGGAGACATACGCAATTCTTCAGGAAAGCTGGTCAAGGATAAGTACACCATCAATAAGATCATCTTCCTGCAGCAAGAAAGGACAGCAAACACCCCGCACGACATCTTTCAGTGTACGAGTGAAGGGTTGGGGGTGATCCGAGATTGCAAGAAGAAAGACGACTTTCACCATCACGATGATGTGCCCGCGAAGGGTCCGTTGTTTGCCAAAGCATCCAAAGTATACGTGGACTCGCAATTGTATTTTGAGATCACGGATTTGAGGAAGAAACCTGATTGGAAGTCGACTTAG 5880 47.91 MDRNREARRSTMAAANGLSRRRHRTNSLRESPEEDVTVELQETARLRDRGSGKKDRDRERDRLSRSKRRRADRLMHGSNREDVGEESSEESVNDEEDDEDEDCGGTVRMLPPNPSSMPLISNQRKTFPPAKTFRTAATWKAADEMIGVSVPRKARSVFTKRTHDSWTPTAGVGSVELIHRQASTSPVRPSIGLATASLAPASPSSSNASARKKPKSNGPKLRPPKVSSKSSSAQDEIEIEIAEVLYGMMRQPQGPSKQDISVSDSREVNKSTTDAKSRVSSPISNSSSALPLPPSIVTQNSASIVSSIAAIAPKRKRPRPIKYDDENPSIFSGRNGPIFSTTKPETDHSSVTEISSHNLKKYSGFLAENGRVSVNSGSSQVAPASSEAQIEQIMPEVNVLSDSKPLVAESNGKDLGVTKEEPQSPKNETPVLILNNNNQDEMTSTEPHSSMAELENQREEKFQIDLMAPPSRSSPERNGEIDFVAVDLKSMVTDAEMEIKKAKIMEDDKASKIGKEDDVNVEAKAKSEDADSRNHLVMISKDRLPPDLEKTETETGYGGLSNNKLNRLAQKQHQPSSISDKSGPANSLPLPMSVAGWPSGLPPMGYVTPLQGIVSMDGSSVTSTAAIQPPNLLFPPSQPKRCATHCYIARNIFYNQHIARMNPFWPAAPSPASMFGAKHCNLNVLPASDFHGNLPGKSPGSMQDKAQSLPTFSAQSGKDNKSPQPAAIVDVSQRKQILVQQSLPPGAASNILGPAFIFPLNQQQAAAASSRPGLVKSLTGGAVSSATSGSASMSGSTGAAIAGPTMSFNYPNMPVNEAQYLAFLQNNGYSFPIPAHVGAPPGYRGAHPPPAIPFFNGSFYSSQMIHPQPSGQTQLSQQGPQSSAVASGGSSNHKHLQSQQQRSHAGGVYGGGGNLQGFPSKNQASQPLQLPRPRQLEAEIGGEESPSTADRVSRSNMNVYGQNFPIPIHPPNYTVINPPVPISGGGEKKHSQQQGGSKTGVEPAQAFALSITSINGASTTTGIDLSTIAPNHPMSQNLPELTRQSYQFMAAATAAQAAQPKKSYPDGNGDNSLSVEEDRKIMAAKTPTPTMVQSIAFSRTDLLDASSVSTIPGGTAMVDSSARRPSGGVYTDHLPSSSMAGKFPDSLSSFSQNLVQSNTSSPAQSPQWKNSVRASTSQVPTQSVSSTSSSTKNLPQQPNRPQQSHTQISFAANPKSSLQNQAQQAVSSSSQAPSPPLMVGSPTSSISKSSGGSPRLATSTTTGTKTGQAPMMSSQRIKNSQPLPTQKSILGNPHGTSSLSSGAKTQQQPQPQHLSKQSLQQAQLFFSHPYMQAQASHSTSPSATSAAGGYYLQRRRLEPQPVAPQGQSSSTSGGMLSLCSPITLDPAKVVSGASAGNNPKTGGGLPAQTVLHSSQFSASHLSGNSPHSLPAGFPYIHAVSPAAVQMKPTEKQPAGEREYVCTCLAYIMQTSIFPQLLSIFRPISVPSALSNFLNDGIIDCGPIHRSEKPLVGCLKDAAIDIVCIGMTMMVDTVARQGEVDTATLFDGGATCPDGGAPSNEAEQNKNNGGAPSNEAAPNAKNRGASRRAHHKMLIALQRMGQREAPPPSSRATLSAASPVASPSSSSVTESTNCFTIAVSGKLAPPVVLARRQCVGFSLMLNRRTAAATPVPLPVTSAESNSKLIFAAACEVIGVGGGGSNAVNCMIESSMKVVEFWIVNTDVQAMRMSPVYPENRLQIGQELTRGLGAGGNPEIDMNVAKESKQYIEEALYGLDMVFVTAGMGGGTGSGGAPVIAGVAKSMGILIIGIVTAPFSFEGRRRTVQAQEGIAGLRDSVNTLIVIPNDKLTDGSFQEACCWKYLEEFGDIRNSSGKLVKDKYTINKIIFLQQERTANTPHDIFQCTSEGLGVIRDCKKKDDFHHHDDVPAKGPLFAKASKVYVDSQLYFEITDLRKKPDWKST 1959
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1742806 1754274 - BLOR00128 Blo01g00128 54568

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00128 1959 MobiDBLite consensus disorder prediction 1607 1627 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 87 103 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 251 292 - -
Blo01g00128 1959 PANTHER PROTEIN TIME FOR COFFEE 1 1124 IPR039317 GO:0042752
Blo01g00128 1959 PANTHER PROTEIN TIME FOR COFFEE 1126 1454 IPR039317 GO:0042752
Blo01g00128 1959 MobiDBLite consensus disorder prediction 1600 1627 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 862 905 - -
Blo01g00128 1959 Pfam Tubulin/FtsZ family, GTPase domain 1691 1848 IPR003008 GO:0005525
Blo01g00128 1959 SMART Tubulin_4 1688 1877 IPR003008 GO:0005525
Blo01g00128 1959 MobiDBLite consensus disorder prediction 407 432 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 543 564 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 1109 1318 - -
Blo01g00128 1959 Gene3D Tubulin/FtsZ, GTPase domain 1686 1869 IPR036525 -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 691 725 - -
Blo01g00128 1959 SUPERFAMILY Tubulin nucleotide-binding domain-like 1690 1848 IPR036525 -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 197 213 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 333 349 - -
Blo01g00128 1959 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 1783 1789 IPR017975 GO:0005525|GO:0005874|GO:0007017
Blo01g00128 1959 MobiDBLite consensus disorder prediction 862 929 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 23 86 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 1548 1587 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 1557 1574 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 254 292 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 700 725 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 197 234 - -
Blo01g00128 1959 PRINTS Cell division protein FtsZ signature 1803 1824 IPR003008 GO:0005525
Blo01g00128 1959 PRINTS Cell division protein FtsZ signature 1775 1795 IPR003008 GO:0005525
Blo01g00128 1959 PANTHER PROTEIN TIME FOR COFFEE 1 1124 - -
Blo01g00128 1959 PANTHER PROTEIN TIME FOR COFFEE 1126 1454 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 1 128 - -
Blo01g00128 1959 MobiDBLite consensus disorder prediction 316 349 - -
Blo01g00128 1959 ProSitePatterns FtsZ protein signature 2. 1774 1795 IPR020805 GO:0005525
Blo01g00128 1959 CDD FtsZ_type1 1691 1848 IPR000158 GO:0003924|GO:0005525
Blo01g00128 1959 MobiDBLite consensus disorder prediction 1141 1318 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00128 - - - jre:109010448 1243.8
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g00128 Blo12g00324 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00128 Blo-Chr1:1742806 Blo07g01337 Blo-Chr7:33561566 1.32E-71 dispersed
Blo10g00853 Blo-Chr10:27015561 Blo01g00128 Blo-Chr1:1742806 1.25E-11 dispersed
Blo02g00580 Blo-Chr2:10672332 Blo01g00128 Blo-Chr1:1742806 3.77E-19 transposed
Blo05g00360 Blo-Chr5:4346628 Blo01g00128 Blo-Chr1:1742806 2.06E-09 transposed
Blo17g00577 Blo-Chr17:10704548 Blo01g00128 Blo-Chr1:1742806 9.57E-10 transposed
Blo01g00128 Blo-Chr1:1742806 Blo12g00324 Blo-Chr12:18785097 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g474 Blo01g00128 Blo12g00324 . Bda08g00233 Bpe04g00837 . Bma04g00791 Bma05g01112 Cmo08g01126 Cmo17g00232 . . . . . . . . . . . . . . Cla06g00571 Cam06g0610 Cec06g0611 Cco06g0617 Clacu06g0597 . Cre06g1358 Cone14ag0842 . . . . . . . . . . . Bpe05g00906 . . . . . . Cma08g01150 Cma17g00246 Car08g01031 Car17g00220 Cpe12g00204 Cpe17g00142 Bhi12g01725 . . Lac12g2296 . . . . . . . . . . Lsi09g01331 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003917 1 4 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 2 1 45
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g00128 Blo_Chr01 FPKM 0.21089 0.684504 0.0 0.422663 2.664165 2.133659 2.832256 0.207975 0.172904 0.22565