Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00132 ATGAGCAGAAGCAGCAATAATGGAGGTGGTGGCCCGTGTGGAGCCTGCAAGTTTCTGAGAAGAAAATGCGTGAAGGGCTGTGTATTTGCACCGTATTTTGATTCTGAACAAGGCACTGCACATTTTGCAGCAGTTCATAAGGTGTTTGGCGCAAGCAACGCTTCCAAACTTCTGATTCACATTCCTGTTCATCGACGTCTGGATGCAGTCGTCACTCTGTGTTACGAGGCTTTGGCTAGGGTTAGAGATCCTGTCTATGGCTGTGTTGCCCATATTTTTTCCCTACAACAGCAGGTGATGAATTTGCAGATGGAGTTGGCCTTGGTTCAAGCTCGGCTTTATACGATACAAAAACTTTCACCAAACCTCGCACCAACAATCCCTCGCTCTTCGTTCCAAGACACTATCGATCGATTGAAGGATTCTGGAGGGACGACCTCCGGCGACGGTAGCTCCGGTTCCGATTTCGGCGAAAACAAAACCCTCAGTTTTGTTTTGTTCTAA 504 47.62 MSRSSNNGGGGPCGACKFLRRKCVKGCVFAPYFDSEQGTAHFAAVHKVFGASNASKLLIHIPVHRRLDAVVTLCYEALARVRDPVYGCVAHIFSLQQQVMNLQMELALVQARLYTIQKLSPNLAPTIPRSSFQDTIDRLKDSGGTTSGDGSSGSDFGENKTLSFVLF 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1819924 1822803 - BLOR00132 Blo01g00132 54572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00132 167 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 133 - -
Blo01g00132 167 Pfam Lateral organ boundaries (LOB) domain 12 110 IPR004883 -
Blo01g00132 167 ProSiteProfiles LOB domain profile. 11 113 IPR004883 -
Blo01g00132 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 5 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00132 Blo-Chr1:1819924 Blo09g00352 Blo-Chr9:14137338 3.68E-53 dispersed
Blo01g00132 Blo-Chr1:1819924 Blo01g00133 Blo-Chr1:1828382 2.46E-63 tandem
Blo01g00132 Blo-Chr1:1819924 Blo12g00316 Blo-Chr12:18573057 8.97E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11805 PF03195 LOB 6.80E-37 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00132 - K21994 cqi:110714113 220.32