Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00141 ATGGCGGAGCCGGATCTCAGATCGCCGCTTCTCGGCGTTCAGCCGGTGGATCCGCCACAGTTGATCCTCACGATACGAGAAGACTCCGAACGGTCTGTTCTATCGGATCGGACTTGGGACGGCGGTAACGGTGGTTCTGTATCGCAATTTCGCAATCCGTTTGATTTTCTTGGATCGGAGGGATTTGATGTGCCGGAAACGACTACGGTGGACCCGTTTCTGAACGATACGTCTCGGATTGAAGGGGTTTACGAGTGGTTCAAGATTGTCGTTTGCTTGCCTCTGGCGCTTGCTCGGCTTGTTCTGTTTGGATTTTGTCTTATGTTAGGGTATCTAGCTACGAGACTGGCGCTTGAGGGGTGGAAGGATAAGGAAAATCCCATGCCGAATTGGAGGTGTAGGATCATGTGGATTACGAGGCTTTGTGCTCGATGCATTCTGTTTTCTTTCGGGTACCACTGGATTAGAAGGAAAGGAAAGCCTGCTCCAAGGGAAACTGCTCCTATTGTAGTATCTAATCATGTATCGTACATAGAACCAATTTTTTATTTTTACGAATTATTTCCTACAATGGTTGCATCTGAGTCCCATGACTCTATTCCGTTTGTGGGAACTATTATCAGAGCAATGCAGGTGATATATGTTAATAGGTTTTCACCATCATCAAGGAAACGTGCTGTTAATGAAATAAAGAGAAAGGCTTCTTGCGATAGATTTCCTCGAGTATTGTTATTTCCAGAAGGAACCACTACCAATGGAAGGGTCCTTATCTCATTTCAACTTGGAGCTTTTATTCCTGGTTACCCAATTCAACCAGTAGTTGTACGCTATCCTCACGTACACTTTGACCAGTCATGGGGATATATTTCATTAGCAAAGATCATGTTTAGAATGTTCACCCAGTTTCACAATTACATGGAGGTGGAATACCTTCCTGTTGTTTCACCTCTTGATCACAAAAACGAAAGCGCTTTTCAATTTGCGAAGAGGACGAGTCACGTTATTGCAACAGCACTAAATGTTGTCCAAACACTTCATACGTATGGAGATCTAATGCTTCTCACGAAAGCATCACAAGAAAAACAGGTTTTGCCAAATCAAGAAAGGGATGAGGGCTTCACTTTTCTACCCACAATTAGCCTTCTTCTTTTAGGGCAAGTGACTTTCTCAAAGAGGAGAAGTGGGCTTGTGAAGAAGGCTTTTGAGCTATCAGTTCTCTGCGATGCTGAGGTTGCCCTCATCGTCTTCTCCCCCAGCGGAAAGCTTTACGAATTTTCAAGCTCTAGCATGCAGGCGACGATAGAGCGTTATCGAAGGCAGATCAAACACAGTCGAATCATCGAAAAAATCCCAGAAGAAAATCTTAAGATGAGTTCAGTTGACCTAATGAACACCGTTAATTTGCAGCGTATGAATCAAGTAGTGTCAGAAATGGCGAAGAAAGTTGAGCAGCTTGAAGTTTCGAAAAGGAAACTTTTGGGACAAGGTCTTGAATCTTCCACCATTGAAGAGCTTGCACAGATAGAAAGAGAGCTCGAGAAAAGCATTACTAGCATCCGAGCAAGAAAGACTCAAGTTTTCAAGGAACAGATTAAGCAATTGAAAGATAAGGGAAAAATCTTAGAAGCTGAAAATGAAAAGCTAAGTGGCAAGGTAATCATGGCAGAGTTTGGAAGTTTTGGAGGAAAGCAAATGAACGAGGGTGAAGAAGAAAAGACCGAAAATGGGCAGAGCGACGTGGAAACAGAGCTCTTCATTGGCGTATGCCCAGATACGAGGACAAAAGCGTCATTTCACTCCCGTAACTAA 1809 43.67 MAEPDLRSPLLGVQPVDPPQLILTIREDSERSVLSDRTWDGGNGGSVSQFRNPFDFLGSEGFDVPETTTVDPFLNDTSRIEGVYEWFKIVVCLPLALARLVLFGFCLMLGYLATRLALEGWKDKENPMPNWRCRIMWITRLCARCILFSFGYHWIRRKGKPAPRETAPIVVSNHVSYIEPIFYFYELFPTMVASESHDSIPFVGTIIRAMQVIYVNRFSPSSRKRAVNEIKRKASCDRFPRVLLFPEGTTTNGRVLISFQLGAFIPGYPIQPVVVRYPHVHFDQSWGYISLAKIMFRMFTQFHNYMEVEYLPVVSPLDHKNESAFQFAKRTSHVIATALNVVQTLHTYGDLMLLTKASQEKQVLPNQERDEGFTFLPTISLLLLGQVTFSKRRSGLVKKAFELSVLCDAEVALIVFSPSGKLYEFSSSSMQATIERYRRQIKHSRIIEKIPEENLKMSSVDLMNTVNLQRMNQVVSEMAKKVEQLEVSKRKLLGQGLESSTIEELAQIERELEKSITSIRARKTQVFKEQIKQLKDKGKILEAENEKLSGKVIMAEFGSFGGKQMNEGEEEKTENGQSDVETELFIGVCPDTRTKASFHSRN 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1918103 1937613 - BLOR00141 Blo01g00141 54581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00141 602 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 386 425 IPR002100 GO:0003677|GO:0046983
Blo01g00141 602 Pfam Acyltransferase 161 274 IPR002123 GO:0016746
Blo01g00141 602 Gene3D - 385 451 IPR036879 GO:0003677|GO:0046983
Blo01g00141 602 Coils Coil 468 488 - -
Blo01g00141 602 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 41 361 - -
Blo01g00141 602 SMART plsc_2 168 278 IPR002123 GO:0016746
Blo01g00141 602 ProSiteProfiles MADS-box domain profile. 386 429 IPR002100 GO:0003677|GO:0046983
Blo01g00141 602 PRINTS MADS domain signature 371 391 IPR002100 GO:0003677|GO:0046983
Blo01g00141 602 PRINTS MADS domain signature 406 427 IPR002100 GO:0003677|GO:0046983
Blo01g00141 602 PRINTS MADS domain signature 391 406 IPR002100 GO:0003677|GO:0046983
Blo01g00141 602 CDD MADS_MEF2_like 386 438 IPR033896 GO:0000977|GO:0045944
Blo01g00141 602 ProSiteProfiles K-box domain profile. 468 558 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo01g00141 602 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 134 342 - -
Blo01g00141 602 SMART madsneu2 369 428 IPR002100 GO:0003677|GO:0046983
Blo01g00141 602 SUPERFAMILY SRF-like 386 448 IPR036879 GO:0003677|GO:0046983
Blo01g00141 602 MobiDBLite consensus disorder prediction 561 584 - -
Blo01g00141 602 Pfam K-box region 468 551 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo01g00141 602 Coils Coil 531 551 - -
Blo01g00141 602 CDD LPLAT_LPCAT1-like 143 352 IPR045252 GO:0008374
Blo01g00141 602 PANTHER LYSOPHOSPHATIDYLCHOLINE ACYLTRANSFERASE 1-RELATED 41 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00141 Blo-Chr1:1918103 Blo02g00290 Blo-Chr2:2859263 0 dispersed
Blo06g01107 Blo-Chr6:34467292 Blo01g00141 Blo-Chr1:1918103 1.51E-09 dispersed
Blo13g00482 Blo-Chr13:25699684 Blo01g00141 Blo-Chr1:1918103 1.22E-09 dispersed
Blo01g00141 Blo-Chr1:1918103 Blo15g00152 Blo-Chr15:1517856 4.05E-43 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11808 PF01553 Acyltransferase 1.70E-12 CL0228 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00141 K13510 - vvi:100262557 572.778