Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00142 ATGAATAATTATGGTTCTTCGTCTTCATATCCATACCAAAATCCATATGTATATCCCCATCCTCCTCCTCCTCAACAACCACCTCATCCGCCGGATCCATACGCTGCTCCTCCTTACCCCAATCAATTGAATTCTTTGTATTCTTTTCCACATCCATACCCTCCTCATCAACCTTCCCCTTCCCATTCGGGTTCATTAGACTATCACCACCCACCTGATCATTCGGGCCCTATGCCATATCCATATTCGTATCCAGTTCCTCCAGTTACTCCTAATGCTCCTCCTCTTCCTGTTCTTCAACCCCATGGAAGCTTCCAATATGGTTCCCCTCATTCCCATTATCCACAACCAAGTCCTTACCCTCCTCCAGATATTCAACCCCAATCCACTTCCCATGCGGGATTCACCAATCATCACCAGCAGGATTCATACCCACCATTGGATGAACGTTTTGGGGGTATACACTTGTCTGATTATCATCCACCTGCCCCTGCATCGCCACCTGCACCTGCAGTGCATCCTTTGGTAAGCTCACCTTCGAGTGCGAGATATGAGAGGCAGGAAGGATTTTATGGACATCCAAATGCTTCATTTTCTAGTAGCGAAGCAAGTTATTCTGGGCCTCTGGATTCGCCTGGTTATTCATTTTCCCACTCGAGTTCATTTAATGAGTCCCAACATAGTCAGAATTTGCAGATTGTACCATTCCATAAAGGATCCTTGAAAGTTCTCCTTCTGCATGGGAATTTAGAAATATGGGTAAATGGAGCACAAAATTTACCCAACATGGATATGTTTCACAAAACATTGGGAGAGGTGTTCTCCAAATTACCAGGGAATGTAAGTAACAAAATTGAAGGCCACATGAGCCATAAGATCACTAGTGACCCCTATGTAGCAATCTCTATTTCAAACGCTGTAATTGGAAGGACTTTTGTGATCAGCAACAGCGAAAATCCTCTATGGAAGCAACATTTCTTTGTTCCTGTTGCTCATTATGCGGCTGAAGTTCACTTTGTCGTCAAAGACAGTGATGTTGTTGGATCACAGCTTATAGGCGTCGTGGCGATTCCAGTCGAACAGTTATACTCAGGGGCAAAAATTGAGGGAACCTTCCCTATATTGAATAGTAGCGGAAAGCCATGTAAACCAGGTGCAGTTCTTAACGTTTCAATCAAGTACATCCCCATAGAGAAAATGACCATGTATCATCATGGAGTTGGGGCTGGCCCTCACTACCATGGAGTTTCAGACACATATTTTCCTCTTAGAAAGGGTGGTAGGGTCACTCTTTATCAAGATGCTCATGTTCCTGATGGGAGCCTTCCAAATGTGAGGCTTGGAAACGGAATGCATTATGTGCATGGGAAGTGTTGGTATGACATCTGCAATGCAATACGTCAGGCCAAGCGTTTGGTTTACATCACTGGGTGGTCGGTTTGGCACAAAGTCACATTAATTCGAGATGCTGGCTCTTCATCAAATCATAGCCTAGGAGATCTTTTGAGGTCAAAGTCGCAGGAAGGCGTGAGAGTGTTGCTTCTTATTTGGGACGACCCTACTTCTAGGAATATTTTGGGTTATAAAACAGATGGTGTCATGCAAACTCATGATGAGGAAACTCGTCGTTTTTTCAAACATTCTTCAGTGCAAGTGCTGCTTTGTCCTCGCACTGCTGGAAAACGACATAGTTGGGTCAAGCAAAGGGAAGTTGAAACCATTTACACTCACCATCAGAAAACTGTAATCGTGGATGCTGATGCTGGCAATAATAGAAGAAAGATTGTTGCTTTTGTTGGAGGACTTGATCTATGCGATGGGCGATATGATACTCCACAACATCCTCTATTTAGAACACTAAAATCAGAGCATAAAGATGACTATCATAATCCTACTTATACGGGTAGTGTTGTTGGCTGTCCCAGAGAACCATGGCATGATTTGCACAGTAAAATTGATGGTCCAGCTGCATATGATGTTCTGACTAACTTTGAGGAGCGCTGGCAGCGGGCATCATCACCCAGGGGGATAAATAAACTGAAATCCTCATCTGAAGATGCTTTACTGAGAATTGAAAGAATTTCCGATATAATTGGGATATCAGATGTTTGTCGCAATAGCGAGGATGATCCTGAAGCTTGGCATGTTCAGATTTTCCGTTCAATTGATTCTAATTCTGTCAAAGGTTTTCCGAAGAATCCAGTAGATGCCTCAAGCAAGAATCTAGTGTGCGGTAAGAATGTTTTGATTGACATGAGCATACATACTGCGTATGTCAAAGCAATTCGTGCTGCCCAGAATTTTATTTACATTGAAAACCAGTACTTCATTGGATCGTCATTCAATTGGAGTTCAAACAAAGATCTAGGTGCTAACAATTTGATACCGATGGAAATAGCCCTAAAGATTGCTGATAAGATTAGAGCAAATGAGAGATTTGCTGTTTATATTGTCATCCCTATGTGGCCAGAGGGTGCTCCGACTGCTGGTGCTACACAGAGGATTCTATTTTGGCAGAATAAAACAATGCAGATGATGTATGAGACGATTTACAAGGCATTGGTGGAAACTGGGCTAGAGGGTGCATTTTCACCACAAGACTACTTAAACTTCTTCTGTTTGGGGAACCGTGAAGGTGCCGATGGAAATGATCCTTTAAGTGCAGAAAGCCCCACAGCAGAAAACACCCCTCAGGCACTAAGCAGAAAAAGTCGCCGGTTTATGATATATGTTCATTCCAAAGGTATGATAGTTGATGATGAATATGTAATATTGGGATCTGCAAATATCAACCAGCGATCTATGGAAGGCACTAGAGACACAGAAATTGCAATGGGAGCCTATCAACTTAGTCATACCTGGGAAAGAAAACACTCAAATCCTCAAGGACAGATTTACGGGTACCGAATGTCGTTGTGGGCGGAGCACACAGGGGTAATAGAAGATTGCTTCACACAACCAGGGAGTTTAGAATGTGTGAAAAGACTGAGAACAATAGGAGAGTTGAACTGGAGGCAATTTGCTGCTGATGAGGTAACAGAGATGAGAGGGCACCTCCTAAAATACCCAGTTGAAGTTGATAGGAAAGGCAAAGTGAGGCCTCTTCCTGGATGTGAACATTTTCCAGATGCTGGTGGGAAAATAGTGGGCTCATTCCTTGCCATCCAAGAGAATCTCACCATCTGA 3186 43.25 MNNYGSSSSYPYQNPYVYPHPPPPQQPPHPPDPYAAPPYPNQLNSLYSFPHPYPPHQPSPSHSGSLDYHHPPDHSGPMPYPYSYPVPPVTPNAPPLPVLQPHGSFQYGSPHSHYPQPSPYPPPDIQPQSTSHAGFTNHHQQDSYPPLDERFGGIHLSDYHPPAPASPPAPAVHPLVSSPSSARYERQEGFYGHPNASFSSSEASYSGPLDSPGYSFSHSSSFNESQHSQNLQIVPFHKGSLKVLLLHGNLEIWVNGAQNLPNMDMFHKTLGEVFSKLPGNVSNKIEGHMSHKITSDPYVAISISNAVIGRTFVISNSENPLWKQHFFVPVAHYAAEVHFVVKDSDVVGSQLIGVVAIPVEQLYSGAKIEGTFPILNSSGKPCKPGAVLNVSIKYIPIEKMTMYHHGVGAGPHYHGVSDTYFPLRKGGRVTLYQDAHVPDGSLPNVRLGNGMHYVHGKCWYDICNAIRQAKRLVYITGWSVWHKVTLIRDAGSSSNHSLGDLLRSKSQEGVRVLLLIWDDPTSRNILGYKTDGVMQTHDEETRRFFKHSSVQVLLCPRTAGKRHSWVKQREVETIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDTPQHPLFRTLKSEHKDDYHNPTYTGSVVGCPREPWHDLHSKIDGPAAYDVLTNFEERWQRASSPRGINKLKSSSEDALLRIERISDIIGISDVCRNSEDDPEAWHVQIFRSIDSNSVKGFPKNPVDASSKNLVCGKNVLIDMSIHTAYVKAIRAAQNFIYIENQYFIGSSFNWSSNKDLGANNLIPMEIALKIADKIRANERFAVYIVIPMWPEGAPTAGATQRILFWQNKTMQMMYETIYKALVETGLEGAFSPQDYLNFFCLGNREGADGNDPLSAESPTAENTPQALSRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQLSHTWERKHSNPQGQIYGYRMSLWAEHTGVIEDCFTQPGSLECVKRLRTIGELNWRQFAADEVTEMRGHLLKYPVEVDRKGKVRPLPGCEHFPDAGGKIVGSFLAIQENLTI 1061
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1940325 1950725 + BLOR00142 Blo01g00142 54582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00142 1061 MobiDBLite consensus disorder prediction 15 38 - -
Blo01g00142 1061 CDD C2_plant_PLD 242 395 - -
Blo01g00142 1061 Gene3D C2 domain 243 383 IPR035892 -
Blo01g00142 1061 ProSiteProfiles C2 domain profile. 227 372 IPR000008 -
Blo01g00142 1061 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 246 397 IPR035892 -
Blo01g00142 1061 SMART pld_4 907 934 IPR001736 GO:0003824
Blo01g00142 1061 SMART pld_4 573 608 IPR001736 GO:0003824
Blo01g00142 1061 Pfam C2 domain 248 374 IPR000008 -
Blo01g00142 1061 Gene3D Endonuclease Chain A 453 691 - -
Blo01g00142 1061 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 907 934 IPR001736 GO:0003824
Blo01g00142 1061 Pfam Phospholipase D Active site motif 574 608 IPR001736 GO:0003824
Blo01g00142 1061 Pfam Phospholipase D Active site motif 908 934 IPR001736 GO:0003824
Blo01g00142 1061 Gene3D Endonuclease Chain A 748 960 - -
Blo01g00142 1061 SMART C2_3c 249 371 IPR000008 -
Blo01g00142 1061 MobiDBLite consensus disorder prediction 1 179 - -
Blo01g00142 1061 Pfam Phospholipase D C terminal 981 1051 IPR024632 -
Blo01g00142 1061 MobiDBLite consensus disorder prediction 74 98 - -
Blo01g00142 1061 SUPERFAMILY Phospholipase D/nuclease 711 993 - -
Blo01g00142 1061 PANTHER PHOSPHOLIPASE D 154 1061 IPR015679 -
Blo01g00142 1061 PANTHER PHOSPHOLIPASE D ALPHA 1 154 1061 - -
Blo01g00142 1061 MobiDBLite consensus disorder prediction 127 142 - -
Blo01g00142 1061 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 573 608 IPR001736 GO:0003824
Blo01g00142 1061 SUPERFAMILY Phospholipase D/nuclease 414 673 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00142 Blo-Chr1:1940325 Blo03g00188 Blo-Chr3:4527683 0 dispersed
Blo01g00142 Blo-Chr1:1940325 Blo06g00662 Blo-Chr6:29610978 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00142 K01115 - jre:109011028 1562.36