Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo01g00163 | ATGAGTTTGCCCCGTTTTTGTCGTTCTGGGTTTTGGTTGGTAGCTAGCACTAGCAGGATAAAATCAAAAAGCTGCAAGGAAGGAATTAGAAACCCAGAATCTTGCGATTCTTCAACTTTCTATTATCTGAGGGGTACGGGTGGGGGTGATTTGCCTCCCCCCTCAGTTAATTTCAAGCTGGAATTATTGAAGAAGTCTGACCCACTTCATATTTTTCACTGTCTGGTTAATTTCTGTCTATTGCTGTCGTGGATGAGTTTACTTCATTGCTTCGGGTTTTGTTTGAAGGTGGGGCATCTATTTTTGATGCTATGCTGCTGGGTTATACAGTTCATTTCCAAGAACTGGTTTAATGGTGGAAAAATGGAAACAAAAAATGATTTTCTGGGTGAGAGCCTCAAGGTTTGGCTCAAATTTTGGGAGATCACTGGTAAGAGTTGTAAGATCCATCTTCAATACTACCAATTTATAGGATTCAAGAGAGCCAGAAAAACATGGTGGAGAAAACTTTTAGTTGCTTGGGTGCTTGGTTGGACCTTAGTATCATTGTGGATCTTTTGGTACATGAACTTACAAGCGACTGAAAAGAGAAAGGAAACTCTTGGCAGTATGTGTGATGAGAGGGCAAGAATGTTACAAGACCAATTCAATGTGAGCATGAACCATATTCAGGCAATGTCCATTTTGATCTCCACATTCCATCACGGCAAAAATCCTTCGGCTATCGATCAAGCGACTTTTGCTAGATACACGGAAAGAACTGCTTTTGAGAGGCCTCTTACAAGTGGTGTGGCATATGCTGTGAGGGTGCTCCACTCTGAAAGAGAGCAATTTGAGAAGCAACAAGGATGGACTATTAAAAGAATGGATACACTGGAGCAAACCCCCGTTCACAAAGATGATTACGCCCCAGAAGGCTTGGAGCCGTCTCCAATCCAGGAAGAATATGCTCCTGTCATCTTCGCCCAAGATACCATTTCTCATGTGGTTTCGGTTGATGTGCTATCTGGAAAGGAAGACCGGGAAAATGTTTTGCGGGCAAGAGCATCCGGAACAGGGGTCCTAACTGCACCTTTCAGGCTATTAAAAACAAATCGACTTGGAGTAATATTAACTTTTGCTGTCTACAAGGTGGATCCCCCTTCAAATGCCACCCCAAAGGAGAGAATTCAGATGACTGATGGATATCTTGGCGGAGTCTTTGACATCGAGTCTCTCGTGGAGAAGTTACTTCATCAACTTGCTAGCAAGCAAACCATCCTTGTGAATGTCTATGACACAACTAATCGCTCACATCCTATCAGCATGTATGGTTCATATGAATCAGAGAATGGTTTGCAGCATCTTAGCCCGCTCAACTTTGGAGATCCATTTCGGAAGCATGAGATGCGATGCAGATTGAAGCAAAAACCACCATGGCCATGGCTGGCTATTACAACTTCTATTGGTACACTTATTATTGCATTGCTGGTCGGGCATATATTTAATGCAACCTTGAATCGAATTGCCAAAGTAGAAGACGATTACCATAAGATGATCGAACTCAAGAAACGGGCTGAGGCTGCTGATACAGCAAAATCACAGTTCCTTGCTACTGTTTCCCATGAGATCCGAACCCCTATGAACGGTGTTCTAGGGATGTTGGACATGCTTATGGACACTGATCTAGATGTGACACAACTAGATTTTGTTAGAACTGCACAGGGAAGTGGAAAAACTTTAGTCGCGCTAATAAATGAGCTTTTGGATCAAGCAAAGATTGAGTCCGGCAAGCTTGAACTTGATGCAGTGCAGTTTGATCTGCAGGCTATTTTGGACGATGTTTTATCGCTCTTTTCTGGAAAATCACAGGAAAAAGGAGTAGAGTTGGCAGTTTACATTTCAGATCGCGTTCCTGAGATACTGATTGGTGATCCTCGAAGGTTTCGCCAAATCATTACTAATCTTATGGGGAACTCAATCAAGTTCACAGAGAAAGGACACATCTTTGTAACAGTTCATTTAGTGGAGGAGGTGAATGATTCAATTGATGTTGAGATAGAGTCTTTATCCAAGAATACATTGAGTGGTTACCCTGTTGCCAATAGACGTCAAAGTTGGACGGGATTTAGGGGCTTCAACCAAGAGGGCCAGTCCTGTCCTATCCTATCATCCTCATCTGACCTAGTTAACCTAATTATATCAGTTGAAGATACTGGAGTTGGGATCCCGTTAGATTCTCAGCCTCGTGTTTTCACTCCGTTTATGCAAGTCCGGCCGTCAATCTCCCGAACACACGGAGGAACGGGCATTGGGCTGAGTATAAGCAAATGCTTGGTAGGGTTGATGAAGGGAGAAATTGGATTTTCAAGCATCCCCAAGATTGGTTCTACCTTTTCTTTTACTGCTGTCTTCACAAATGCTTGTGCTTCAGATGAACACAAGTTCCAACAAATTAATAAGCAACCCAATTCTTCCTTTGCTGATTTTAAGGGCATGACAGCTTTACTCGTAGACCATCGACCCGTCAGGGCGAAAGTGTCAAGATATCATATTCAGCGACTCGGGATTCAAGTCAATATAGTTTCAGATCTGAATCATGGACTATCGAGTGCGAGTAGTTTTAGTACAAATGTCAATGCCGTTTTTGTTGAGCAAGAAATTTGGGATTTGGATCCAGCCATGCCAGCTCTCTTTGCCGCTAGCTTGAAAAAATCCGATAATATGGTTTCTCCGAAAGTGTTTATTTTATCCAACTCTTTTAGCAATAGATCAAGCTCGAGTTCTTTCAGTGTTTTGAGTCCTGCCATCGTCACGAAGCCTCTTCGATCGAGTATGCTTGCTGCCTCACTACAACGAGCCATGGGTGTAGGGAACAAGGGTAATGCCTGTAATGGGGAAATTCCTAGTTACTCCCTGCACAATCTTCTTCTTGGAAGGAAAATTCTTGTCGTAGATGATAATAATGTCAATCTCAAAGTCGCTGCCGGAGCTCTGAAAAAGTATGGAGCTGATGTTGTTTGTGAGAGTAGGGGGGATGATGCAATCTCACTGCTTACACCGCCCCACCATTTTGATGCATGCTTTATGGATATTCAAATGCCGGAAATGGATGGGTTTGAAGTTACAAAACGGGTTCGGGAAATCGAACATCGTACAAACAACCGTCTTCAAAGCGGAGAGCTGGCGGTGGAATCATTCAATAACATTTCAAACTGGCATTTACCTATTTTGGCCATGACTGCAGATGTTATCCAGGCTACACATGAGAAATGTCTACGATGCGGAATGGACGGATATGTCTCCAAACCTTTTGAAGCCGAACAACTTTATCGAGAAGTTTCCAGATTTTTCCACTCTTCTTCAAATGGAAGTTTGTAG | 3360 | 42.86 | MSLPRFCRSGFWLVASTSRIKSKSCKEGIRNPESCDSSTFYYLRGTGGGDLPPPSVNFKLELLKKSDPLHIFHCLVNFCLLLSWMSLLHCFGFCLKVGHLFLMLCCWVIQFISKNWFNGGKMETKNDFLGESLKVWLKFWEITGKSCKIHLQYYQFIGFKRARKTWWRKLLVAWVLGWTLVSLWIFWYMNLQATEKRKETLGSMCDERARMLQDQFNVSMNHIQAMSILISTFHHGKNPSAIDQATFARYTERTAFERPLTSGVAYAVRVLHSEREQFEKQQGWTIKRMDTLEQTPVHKDDYAPEGLEPSPIQEEYAPVIFAQDTISHVVSVDVLSGKEDRENVLRARASGTGVLTAPFRLLKTNRLGVILTFAVYKVDPPSNATPKERIQMTDGYLGGVFDIESLVEKLLHQLASKQTILVNVYDTTNRSHPISMYGSYESENGLQHLSPLNFGDPFRKHEMRCRLKQKPPWPWLAITTSIGTLIIALLVGHIFNATLNRIAKVEDDYHKMIELKKRAEAADTAKSQFLATVSHEIRTPMNGVLGMLDMLMDTDLDVTQLDFVRTAQGSGKTLVALINELLDQAKIESGKLELDAVQFDLQAILDDVLSLFSGKSQEKGVELAVYISDRVPEILIGDPRRFRQIITNLMGNSIKFTEKGHIFVTVHLVEEVNDSIDVEIESLSKNTLSGYPVANRRQSWTGFRGFNQEGQSCPILSSSSDLVNLIISVEDTGVGIPLDSQPRVFTPFMQVRPSISRTHGGTGIGLSISKCLVGLMKGEIGFSSIPKIGSTFSFTAVFTNACASDEHKFQQINKQPNSSFADFKGMTALLVDHRPVRAKVSRYHIQRLGIQVNIVSDLNHGLSSASSFSTNVNAVFVEQEIWDLDPAMPALFAASLKKSDNMVSPKVFILSNSFSNRSSSSSFSVLSPAIVTKPLRSSMLAASLQRAMGVGNKGNACNGEIPSYSLHNLLLGRKILVVDDNNVNLKVAAGALKKYGADVVCESRGDDAISLLTPPHHFDACFMDIQMPEMDGFEVTKRVREIEHRTNNRLQSGELAVESFNNISNWHLPILAMTADVIQATHEKCLRCGMDGYVSKPFEAEQLYREVSRFFHSSSNGSL | 1119 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2193629 | 2199596 | + | BLOR00163 | Blo01g00163 | 54603 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo01g00163 | 1119 | Pfam | His Kinase A (phospho-acceptor) domain | 525 | 590 | IPR003661 | GO:0000155|GO:0007165 | |
Blo01g00163 | 1119 | CDD | REC_hyHK_CKI1_RcsC-like | 975 | 1107 | - | - | |
Blo01g00163 | 1119 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 137 | 1113 | - | - | |
Blo01g00163 | 1119 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 637 | 798 | IPR003594 | - | |
Blo01g00163 | 1119 | SUPERFAMILY | CheY-like | 972 | 1111 | IPR011006 | - | |
Blo01g00163 | 1119 | CDD | HisKA | 523 | 586 | IPR003661 | GO:0000155|GO:0007165 | |
Blo01g00163 | 1119 | PANTHER | HISTIDINE KINASE 3 | 137 | 1113 | - | - | |
Blo01g00163 | 1119 | SMART | REC_2 | 973 | 1107 | IPR001789 | GO:0000160 | |
Blo01g00163 | 1119 | SMART | HisKA_10 | 525 | 590 | IPR003661 | GO:0000155|GO:0007165 | |
Blo01g00163 | 1119 | Gene3D | - | 969 | 1115 | - | - | |
Blo01g00163 | 1119 | ProSiteProfiles | CHASE domain profile. | 238 | 464 | IPR006189 | - | |
Blo01g00163 | 1119 | Pfam | CHASE domain | 241 | 437 | IPR006189 | - | |
Blo01g00163 | 1119 | Gene3D | - | 493 | 588 | - | - | |
Blo01g00163 | 1119 | Gene3D | CHASE domain | 242 | 471 | IPR042240 | - | |
Blo01g00163 | 1119 | Pfam | Response regulator receiver domain | 975 | 1106 | IPR001789 | GO:0000160 | |
Blo01g00163 | 1119 | Gene3D | - | 589 | 801 | IPR036890 | - | |
Blo01g00163 | 1119 | ProSiteProfiles | Response regulatory domain profile. | 827 | 948 | IPR001789 | GO:0000160 | |
Blo01g00163 | 1119 | Gene3D | - | 189 | 241 | - | - | |
Blo01g00163 | 1119 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 579 | 795 | IPR036890 | - | |
Blo01g00163 | 1119 | PRINTS | Bacterial sensor protein C-terminal signature | 725 | 739 | IPR004358 | GO:0016310|GO:0016772 | |
Blo01g00163 | 1119 | PRINTS | Bacterial sensor protein C-terminal signature | 760 | 778 | IPR004358 | GO:0016310|GO:0016772 | |
Blo01g00163 | 1119 | PRINTS | Bacterial sensor protein C-terminal signature | 743 | 753 | IPR004358 | GO:0016310|GO:0016772 | |
Blo01g00163 | 1119 | SMART | CHASE_2 | 238 | 439 | IPR006189 | - | |
Blo01g00163 | 1119 | ProSiteProfiles | Response regulatory domain profile. | 974 | 1111 | IPR001789 | GO:0000160 | |
Blo01g00163 | 1119 | CDD | HATPase_EvgS-ArcB-TorS-like | 642 | 798 | - | - | |
Blo01g00163 | 1119 | Coils | Coil | 502 | 522 | - | - | |
Blo01g00163 | 1119 | SMART | HKATPase_4 | 637 | 800 | IPR003594 | - | |
Blo01g00163 | 1119 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 512 | 591 | IPR036097 | GO:0000155|GO:0007165 | |
Blo01g00163 | 1119 | ProSiteProfiles | Histidine kinase domain profile. | 532 | 800 | IPR005467 | - | |
Blo01g00163 | 1119 | SUPERFAMILY | CheY-like | 822 | 949 | IPR011006 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00163 | Blo-Chr1:2193629 | Blo11g00965 | Blo-Chr11:21758860 | 0 | dispersed | |
Blo01g00163 | Blo-Chr1:2193629 | Blo12g00277 | Blo-Chr12:16640388 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
11809 | PF03924 | CHASE | 6.70E-36 | CL0165 | Blo | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo01g00163 | K14489 | - | csin:114293806 | 1561.97 |