Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00163 ATGAGTTTGCCCCGTTTTTGTCGTTCTGGGTTTTGGTTGGTAGCTAGCACTAGCAGGATAAAATCAAAAAGCTGCAAGGAAGGAATTAGAAACCCAGAATCTTGCGATTCTTCAACTTTCTATTATCTGAGGGGTACGGGTGGGGGTGATTTGCCTCCCCCCTCAGTTAATTTCAAGCTGGAATTATTGAAGAAGTCTGACCCACTTCATATTTTTCACTGTCTGGTTAATTTCTGTCTATTGCTGTCGTGGATGAGTTTACTTCATTGCTTCGGGTTTTGTTTGAAGGTGGGGCATCTATTTTTGATGCTATGCTGCTGGGTTATACAGTTCATTTCCAAGAACTGGTTTAATGGTGGAAAAATGGAAACAAAAAATGATTTTCTGGGTGAGAGCCTCAAGGTTTGGCTCAAATTTTGGGAGATCACTGGTAAGAGTTGTAAGATCCATCTTCAATACTACCAATTTATAGGATTCAAGAGAGCCAGAAAAACATGGTGGAGAAAACTTTTAGTTGCTTGGGTGCTTGGTTGGACCTTAGTATCATTGTGGATCTTTTGGTACATGAACTTACAAGCGACTGAAAAGAGAAAGGAAACTCTTGGCAGTATGTGTGATGAGAGGGCAAGAATGTTACAAGACCAATTCAATGTGAGCATGAACCATATTCAGGCAATGTCCATTTTGATCTCCACATTCCATCACGGCAAAAATCCTTCGGCTATCGATCAAGCGACTTTTGCTAGATACACGGAAAGAACTGCTTTTGAGAGGCCTCTTACAAGTGGTGTGGCATATGCTGTGAGGGTGCTCCACTCTGAAAGAGAGCAATTTGAGAAGCAACAAGGATGGACTATTAAAAGAATGGATACACTGGAGCAAACCCCCGTTCACAAAGATGATTACGCCCCAGAAGGCTTGGAGCCGTCTCCAATCCAGGAAGAATATGCTCCTGTCATCTTCGCCCAAGATACCATTTCTCATGTGGTTTCGGTTGATGTGCTATCTGGAAAGGAAGACCGGGAAAATGTTTTGCGGGCAAGAGCATCCGGAACAGGGGTCCTAACTGCACCTTTCAGGCTATTAAAAACAAATCGACTTGGAGTAATATTAACTTTTGCTGTCTACAAGGTGGATCCCCCTTCAAATGCCACCCCAAAGGAGAGAATTCAGATGACTGATGGATATCTTGGCGGAGTCTTTGACATCGAGTCTCTCGTGGAGAAGTTACTTCATCAACTTGCTAGCAAGCAAACCATCCTTGTGAATGTCTATGACACAACTAATCGCTCACATCCTATCAGCATGTATGGTTCATATGAATCAGAGAATGGTTTGCAGCATCTTAGCCCGCTCAACTTTGGAGATCCATTTCGGAAGCATGAGATGCGATGCAGATTGAAGCAAAAACCACCATGGCCATGGCTGGCTATTACAACTTCTATTGGTACACTTATTATTGCATTGCTGGTCGGGCATATATTTAATGCAACCTTGAATCGAATTGCCAAAGTAGAAGACGATTACCATAAGATGATCGAACTCAAGAAACGGGCTGAGGCTGCTGATACAGCAAAATCACAGTTCCTTGCTACTGTTTCCCATGAGATCCGAACCCCTATGAACGGTGTTCTAGGGATGTTGGACATGCTTATGGACACTGATCTAGATGTGACACAACTAGATTTTGTTAGAACTGCACAGGGAAGTGGAAAAACTTTAGTCGCGCTAATAAATGAGCTTTTGGATCAAGCAAAGATTGAGTCCGGCAAGCTTGAACTTGATGCAGTGCAGTTTGATCTGCAGGCTATTTTGGACGATGTTTTATCGCTCTTTTCTGGAAAATCACAGGAAAAAGGAGTAGAGTTGGCAGTTTACATTTCAGATCGCGTTCCTGAGATACTGATTGGTGATCCTCGAAGGTTTCGCCAAATCATTACTAATCTTATGGGGAACTCAATCAAGTTCACAGAGAAAGGACACATCTTTGTAACAGTTCATTTAGTGGAGGAGGTGAATGATTCAATTGATGTTGAGATAGAGTCTTTATCCAAGAATACATTGAGTGGTTACCCTGTTGCCAATAGACGTCAAAGTTGGACGGGATTTAGGGGCTTCAACCAAGAGGGCCAGTCCTGTCCTATCCTATCATCCTCATCTGACCTAGTTAACCTAATTATATCAGTTGAAGATACTGGAGTTGGGATCCCGTTAGATTCTCAGCCTCGTGTTTTCACTCCGTTTATGCAAGTCCGGCCGTCAATCTCCCGAACACACGGAGGAACGGGCATTGGGCTGAGTATAAGCAAATGCTTGGTAGGGTTGATGAAGGGAGAAATTGGATTTTCAAGCATCCCCAAGATTGGTTCTACCTTTTCTTTTACTGCTGTCTTCACAAATGCTTGTGCTTCAGATGAACACAAGTTCCAACAAATTAATAAGCAACCCAATTCTTCCTTTGCTGATTTTAAGGGCATGACAGCTTTACTCGTAGACCATCGACCCGTCAGGGCGAAAGTGTCAAGATATCATATTCAGCGACTCGGGATTCAAGTCAATATAGTTTCAGATCTGAATCATGGACTATCGAGTGCGAGTAGTTTTAGTACAAATGTCAATGCCGTTTTTGTTGAGCAAGAAATTTGGGATTTGGATCCAGCCATGCCAGCTCTCTTTGCCGCTAGCTTGAAAAAATCCGATAATATGGTTTCTCCGAAAGTGTTTATTTTATCCAACTCTTTTAGCAATAGATCAAGCTCGAGTTCTTTCAGTGTTTTGAGTCCTGCCATCGTCACGAAGCCTCTTCGATCGAGTATGCTTGCTGCCTCACTACAACGAGCCATGGGTGTAGGGAACAAGGGTAATGCCTGTAATGGGGAAATTCCTAGTTACTCCCTGCACAATCTTCTTCTTGGAAGGAAAATTCTTGTCGTAGATGATAATAATGTCAATCTCAAAGTCGCTGCCGGAGCTCTGAAAAAGTATGGAGCTGATGTTGTTTGTGAGAGTAGGGGGGATGATGCAATCTCACTGCTTACACCGCCCCACCATTTTGATGCATGCTTTATGGATATTCAAATGCCGGAAATGGATGGGTTTGAAGTTACAAAACGGGTTCGGGAAATCGAACATCGTACAAACAACCGTCTTCAAAGCGGAGAGCTGGCGGTGGAATCATTCAATAACATTTCAAACTGGCATTTACCTATTTTGGCCATGACTGCAGATGTTATCCAGGCTACACATGAGAAATGTCTACGATGCGGAATGGACGGATATGTCTCCAAACCTTTTGAAGCCGAACAACTTTATCGAGAAGTTTCCAGATTTTTCCACTCTTCTTCAAATGGAAGTTTGTAG 3360 42.86 MSLPRFCRSGFWLVASTSRIKSKSCKEGIRNPESCDSSTFYYLRGTGGGDLPPPSVNFKLELLKKSDPLHIFHCLVNFCLLLSWMSLLHCFGFCLKVGHLFLMLCCWVIQFISKNWFNGGKMETKNDFLGESLKVWLKFWEITGKSCKIHLQYYQFIGFKRARKTWWRKLLVAWVLGWTLVSLWIFWYMNLQATEKRKETLGSMCDERARMLQDQFNVSMNHIQAMSILISTFHHGKNPSAIDQATFARYTERTAFERPLTSGVAYAVRVLHSEREQFEKQQGWTIKRMDTLEQTPVHKDDYAPEGLEPSPIQEEYAPVIFAQDTISHVVSVDVLSGKEDRENVLRARASGTGVLTAPFRLLKTNRLGVILTFAVYKVDPPSNATPKERIQMTDGYLGGVFDIESLVEKLLHQLASKQTILVNVYDTTNRSHPISMYGSYESENGLQHLSPLNFGDPFRKHEMRCRLKQKPPWPWLAITTSIGTLIIALLVGHIFNATLNRIAKVEDDYHKMIELKKRAEAADTAKSQFLATVSHEIRTPMNGVLGMLDMLMDTDLDVTQLDFVRTAQGSGKTLVALINELLDQAKIESGKLELDAVQFDLQAILDDVLSLFSGKSQEKGVELAVYISDRVPEILIGDPRRFRQIITNLMGNSIKFTEKGHIFVTVHLVEEVNDSIDVEIESLSKNTLSGYPVANRRQSWTGFRGFNQEGQSCPILSSSSDLVNLIISVEDTGVGIPLDSQPRVFTPFMQVRPSISRTHGGTGIGLSISKCLVGLMKGEIGFSSIPKIGSTFSFTAVFTNACASDEHKFQQINKQPNSSFADFKGMTALLVDHRPVRAKVSRYHIQRLGIQVNIVSDLNHGLSSASSFSTNVNAVFVEQEIWDLDPAMPALFAASLKKSDNMVSPKVFILSNSFSNRSSSSSFSVLSPAIVTKPLRSSMLAASLQRAMGVGNKGNACNGEIPSYSLHNLLLGRKILVVDDNNVNLKVAAGALKKYGADVVCESRGDDAISLLTPPHHFDACFMDIQMPEMDGFEVTKRVREIEHRTNNRLQSGELAVESFNNISNWHLPILAMTADVIQATHEKCLRCGMDGYVSKPFEAEQLYREVSRFFHSSSNGSL 1119
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 2193629 2199596 + BLOR00163 Blo01g00163 54603
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00163 1119 Pfam His Kinase A (phospho-acceptor) domain 525 590 IPR003661 GO:0000155|GO:0007165
Blo01g00163 1119 CDD REC_hyHK_CKI1_RcsC-like 975 1107 - -
Blo01g00163 1119 PANTHER TWO-COMPONENT HISTIDINE KINASE 137 1113 - -
Blo01g00163 1119 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 637 798 IPR003594 -
Blo01g00163 1119 SUPERFAMILY CheY-like 972 1111 IPR011006 -
Blo01g00163 1119 CDD HisKA 523 586 IPR003661 GO:0000155|GO:0007165
Blo01g00163 1119 PANTHER HISTIDINE KINASE 3 137 1113 - -
Blo01g00163 1119 SMART REC_2 973 1107 IPR001789 GO:0000160
Blo01g00163 1119 SMART HisKA_10 525 590 IPR003661 GO:0000155|GO:0007165
Blo01g00163 1119 Gene3D - 969 1115 - -
Blo01g00163 1119 ProSiteProfiles CHASE domain profile. 238 464 IPR006189 -
Blo01g00163 1119 Pfam CHASE domain 241 437 IPR006189 -
Blo01g00163 1119 Gene3D - 493 588 - -
Blo01g00163 1119 Gene3D CHASE domain 242 471 IPR042240 -
Blo01g00163 1119 Pfam Response regulator receiver domain 975 1106 IPR001789 GO:0000160
Blo01g00163 1119 Gene3D - 589 801 IPR036890 -
Blo01g00163 1119 ProSiteProfiles Response regulatory domain profile. 827 948 IPR001789 GO:0000160
Blo01g00163 1119 Gene3D - 189 241 - -
Blo01g00163 1119 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 579 795 IPR036890 -
Blo01g00163 1119 PRINTS Bacterial sensor protein C-terminal signature 725 739 IPR004358 GO:0016310|GO:0016772
Blo01g00163 1119 PRINTS Bacterial sensor protein C-terminal signature 760 778 IPR004358 GO:0016310|GO:0016772
Blo01g00163 1119 PRINTS Bacterial sensor protein C-terminal signature 743 753 IPR004358 GO:0016310|GO:0016772
Blo01g00163 1119 SMART CHASE_2 238 439 IPR006189 -
Blo01g00163 1119 ProSiteProfiles Response regulatory domain profile. 974 1111 IPR001789 GO:0000160
Blo01g00163 1119 CDD HATPase_EvgS-ArcB-TorS-like 642 798 - -
Blo01g00163 1119 Coils Coil 502 522 - -
Blo01g00163 1119 SMART HKATPase_4 637 800 IPR003594 -
Blo01g00163 1119 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 512 591 IPR036097 GO:0000155|GO:0007165
Blo01g00163 1119 ProSiteProfiles Histidine kinase domain profile. 532 800 IPR005467 -
Blo01g00163 1119 SUPERFAMILY CheY-like 822 949 IPR011006 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00163 Blo-Chr1:2193629 Blo11g00965 Blo-Chr11:21758860 0 dispersed
Blo01g00163 Blo-Chr1:2193629 Blo12g00277 Blo-Chr12:16640388 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11809 PF03924 CHASE 6.70E-36 CL0165 Blo TR
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00163 K14489 - csin:114293806 1561.97