Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00195 ATGAAAATGCAGTGTGATGTGTGCGAGAAAGCTCCGGCGACGGTGATTTGCTGCGCCGACGAGGCGGCGCTGTGCGCCAAATGCGACGGCGAAGTTCATGCCGCGAACAAGCTGGCAAGCAAGCACCAGAGGCTTCCCCTTCACTGCCTCTCCGGCAAGCTCCCCAAATGCGACATATGCCAAGAAAAGACTGCCTTCATATTATGTGTTGAAGACAGAGCACTCTTTTGTGAAGATTGTGATGAGCCAATTCACTCTACCAACAGCCTTTCAAGAAACCATCGACGGTACCTAGCCACCGGAATCCGGATAGCTCCGAGCTCGAGCTGCTCAAAGGAGATAGAAAAGAGTCCACCAATGGAGCCTCCAAATCCAAAGAAACAACCGGTTCTAGTTTCACTGAATCTGTCGCCGCATTGGACTGTCGATGACTTCCTCTGTTTTTCAGAATTCGAAATCCCCGACAAGAAAGAGGAGCTTGAATTTGGAGAGCTCGAATGGTTATCCGAGATGGGTATCTTCAGTGAGCAGATTTCTCGAGCAGCAATGGCAGTAGCCGAAGTTCCTGAGCTTCCTAGATCACAGCCAAGTAATACCTCATTCAGACCGGCCAAATTGTCACCTCCTTTGAAGAAGCATCGGATCGAAACCTCTGGCAAAGACGATGAGTATCTTACCGTCCCTGATCTTGGTTGA 696 50.0 MKMQCDVCEKAPATVICCADEAALCAKCDGEVHAANKLASKHQRLPLHCLSGKLPKCDICQEKTAFILCVEDRALFCEDCDEPIHSTNSLSRNHRRYLATGIRIAPSSSCSKEIEKSPPMEPPNPKKQPVLVSLNLSPHWTVDDFLCFSEFEIPDKKEELEFGELEWLSEMGIFSEQISRAAMAVAEVPELPRSQPSNTSFRPAKLSPPLKKHRIETSGKDDEYLTVPDLG 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2610431 2612165 + BLOR00195 Blo01g00195 54635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00195 231 SMART bboxneu5 52 99 IPR000315 GO:0008270
Blo01g00195 231 SMART bboxneu5 1 47 IPR000315 GO:0008270
Blo01g00195 231 MobiDBLite consensus disorder prediction 209 231 - -
Blo01g00195 231 Gene3D Classic Zinc Finger 1 92 - -
Blo01g00195 231 PANTHER B-BOX ZINC FINGER PROTEIN 24 1 231 - -
Blo01g00195 231 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 231 - -
Blo01g00195 231 MobiDBLite consensus disorder prediction 191 231 - -
Blo01g00195 231 CDD Bbox1_BBX-like 5 47 - -
Blo01g00195 231 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Blo01g00195 231 CDD Bbox1_BBX-like 56 98 - -
Blo01g00195 231 Pfam B-box zinc finger 3 47 IPR000315 GO:0008270
Blo01g00195 231 Pfam B-box zinc finger 54 95 IPR000315 GO:0008270
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00195 Blo07g00112 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00195 Blo-Chr1:2610431 Blo07g00112 Blo-Chr7:1568502 5.88E-96 dispersed
Blo01g00195 Blo-Chr1:2610431 Blo07g00980 Blo-Chr7:29282753 1.87E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11810 PF00643 zf-B_box 1.40E-06 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00195 - - cit:102626697 327.02