Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo01g00201 | ATGCATGACAACTTTCCATCTTTCTCGAGCAAGTGTGAATATCGTTATAACACTTTATTTGAAACGTCATTTTACCTTGCATCCATCAACCGATGCTTCAGCGAGTTGACCGCGAACCACGAAGTCCTCGTCCACGGTGGAAGCAATGTTGGAGTAGAGCTCAACAGCGATGTTATGAGGGTTAAGTACTACGGTTTTACCTGTTACAGGACTCTGAGTGCTCTGAGGCGATCTGTTGTATGCGACCGCCTCATAGCACTCGTAGTCCTGAAAACAGTAGTACTTAACCATCTGAATATCGCCGTTGAACCCTATTCCAACATTGCTTCCATCGTCGCCGAGGATTCCGTGGTTCGCGGTGAACTCGCCGGACCTCACATACGATTCTTATATACTAGAGTTCGGGGTTGCGGCATGGACTCCGATGATGATATGCACGACGCCCACGACGCCGAGTCTCTTGATGATGATTTCTACAGCGGAGACTTTGATTATTGCAGTGATGATGACGATGTCGAAGCTGACGAATCGGTCGAGGAAGATGTCGATGATTTTGATAAAATCGAGTCTGGTCGCCAGGAGATAAATTATACTATATTGAAGGAATCTGACATACATGAACGTCAAGAGGACGATATTACGAGAATATCTACAGTACTTTCAATTCCACGTGTTGCAGCTACCATCTTGCTTCGCCACTTTAATTGGAATGTTAGTAAAGTGCATGATGAGTGGTTTGCTGATGAAGAAAGAGTGAGAAAGCAACTTGGCTTGCTGGATGCTCCAGTCCAGATTTTAAGTGGTTGTGAAGTTACGTGTGGGATATGTTTTGACTCCTATCCTCATGGAGAGATCAAATCAGCAGCTTGTGGTCATCCTTTTTGCACTTCATGTTGGAAAGGTTACGTTGGAACATCTATTAATGATGGTCCTGGATGTTTACTGTTAAGATGTCCGGATCCATCTTGTGGTGCTGCTGTTGGTCGAGACATGATTAATTTGTTGGCTTGCAATGAAGATAGGAAAAAGTATTCTCGATATCTTCTGAGGTCTTTTGTTGAAGACAATAAAAAGACCAAATGGTGCCCAGCACCGGGTTGTGAGTTTGCTGTGATTTTTTATGCTGGTAACAGGAACTATGACGTGACATGCCTGTGTTCTTATGGCTTTTGTTGGAACTGTACGGAGGAAGCGCACCGTCCCGTAGACTGTGGTACTGTGGAGAAATGGATTATGAAGAACAGTGCTGAATCTGAAAATATGAATTGGATTTTAGCTAACTCCAAGCCATGTCCAAAGTGTAAGCGGCCAATTGAGAAGAACCACGGGTGTATGCATATGACGTGCACACCGCCTTGTAAATTCGAGTTTTGCTGGCTATGCCTAGGTGTATGGTCCGATCATGGTGAGAGAACGGGTGGTTTTTATGCCTGTAATCGTTATGAAACAGCTAAACAAGAAGGCGTGTACGATGAAGCTGAGAGAAGAAGGGAAATGGCTAAAAACTCTATAGAGAGATACACCCATTACTATGAACGTTGGGCAAGCAATCAGTCGTCAAGACAAAAAGCTCTAGCGGATTTGCATCAAATGGAAACTGTACATATTGAGAAACTTAGTGACATGCAGTGCACTCCTGAATCTCAGCTCAAATTCATAACAGAGGCCTGGTTACAGATAATTGAGTGTAGGCGGGTTTTGAAGTGGACATATGCATATGGGTACTACCTTCCAGAAAATGACCAAGCTAAAAGACAGTTTTTTGAATACTTGCAAGGCGATGCAGAGTCTAATTTAGAAAGGCTTCATCAATGTGCAGAGAAGGAACTACAACAGTTCCTTGCTGCCGACGGGCCATCAAAAGAATTTAATGATTTTCGTACAAAGTTGGCTGGTCTGACCAGTGTTACTCGAAATTACTTTGAGAATCTGGTCAGAGCTTTAGAAAATGGTCTCTCGGATGTGGATGCTCGCGGAACTTGCAGCGGGACCAGCAGCTCAAAAGCTACTGCTGGAAGCATCAAAGTAAGACCCGGAAGGAGCAAGGGAAATTCAGTACGCACCAGTGGTTCGAGCCGAAATGTGGATAATTCCAGTGGTTGGTCATGTGAGCAATGTACGTATGCCAATCATACGGCTGCAACTACTTGCCAGATGTGCCTCCAACGAAGGTTGGCAGTTGGTGATGACAATGATATATGCAATCAAAATAGTTATACTTGTATTAAGCTTACTGCCTCAATGCATCGAATGCAAATTGACCCGTTTGTCGTTCATTTTACCGATATTAAGCCCACTAGGAGACACCCGGGAGCAGAGTATGTCGTGAAAGAAGCGCACTGGGTGGGCAAACCGAACTGGTACCGAAGAATCGAATTGGAATTGGAACCGGCAGTTTTGAGAACCGAACCGAACCAGACTGAGAACACTCCTAGCATCAACCGTGTCTTCGGTGCACGCAAATATCCTGATTCGCGGTGGGGCTGGGGGCTGGGGGCTGGTTTCCGGAACTGGGTTGGGTTTCACAAGGAATTGTATTGGGCTGCGTTTCACAAGGGAGTAGTATGTCACAAGAATTGGGCTGGGCTTCAATAA | 2595 | 44.93 | MHDNFPSFSSKCEYRYNTLFETSFYLASINRCFSELTANHEVLVHGGSNVGVELNSDVMRVKYYGFTCYRTLSALRRSVVCDRLIALVVLKTVVLNHLNIAVEPYSNIASIVAEDSVVRGELAGPHIRFLYTRVRGCGMDSDDDMHDAHDAESLDDDFYSGDFDYCSDDDDVEADESVEEDVDDFDKIESGRQEINYTILKESDIHERQEDDITRISTVLSIPRVAATILLRHFNWNVSKVHDEWFADEERVRKQLGLLDAPVQILSGCEVTCGICFDSYPHGEIKSAACGHPFCTSCWKGYVGTSINDGPGCLLLRCPDPSCGAAVGRDMINLLACNEDRKKYSRYLLRSFVEDNKKTKWCPAPGCEFAVIFYAGNRNYDVTCLCSYGFCWNCTEEAHRPVDCGTVEKWIMKNSAESENMNWILANSKPCPKCKRPIEKNHGCMHMTCTPPCKFEFCWLCLGVWSDHGERTGGFYACNRYETAKQEGVYDEAERRREMAKNSIERYTHYYERWASNQSSRQKALADLHQMETVHIEKLSDMQCTPESQLKFITEAWLQIIECRRVLKWTYAYGYYLPENDQAKRQFFEYLQGDAESNLERLHQCAEKELQQFLAADGPSKEFNDFRTKLAGLTSVTRNYFENLVRALENGLSDVDARGTCSGTSSSKATAGSIKVRPGRSKGNSVRTSGSSRNVDNSSGWSCEQCTYANHTAATTCQMCLQRRLAVGDDNDICNQNSYTCIKLTASMHRMQIDPFVVHFTDIKPTRRHPGAEYVVKEAHWVGKPNWYRRIELELEPAVLRTEPNQTENTPSINRVFGARKYPDSRWGWGLGAGFRNWVGFHKELYWAAFHKGVVCHKNWAGLQ | 864 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2657711 | 2667085 | - | BLOR00201 | Blo01g00201 | 54641 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo01g00201 | 864 | SUPERFAMILY | Ran binding protein zinc finger-like | 697 | 724 | IPR036443 | - | |
Blo01g00201 | 864 | ProSitePatterns | Zinc finger RanBP2-type signature. | 701 | 720 | IPR001876 | - | |
Blo01g00201 | 864 | Gene3D | - | 400 | 655 | - | - | |
Blo01g00201 | 864 | PANTHER | RBR-TYPE E3 UBIQUITIN TRANSFERASE | 176 | 672 | - | - | |
Blo01g00201 | 864 | MobiDBLite | consensus disorder prediction | 682 | 700 | - | - | |
Blo01g00201 | 864 | Gene3D | - | 695 | 732 | - | - | |
Blo01g00201 | 864 | CDD | RING-HC_RBR_TRIAD1_like | 273 | 323 | - | - | |
Blo01g00201 | 864 | ProSiteProfiles | TRIAD supradomain profile. | 269 | 482 | IPR044066 | - | |
Blo01g00201 | 864 | SUPERFAMILY | RING/U-box | 343 | 411 | - | - | |
Blo01g00201 | 864 | Pfam | IBR domain, a half RING-finger domain | 342 | 404 | IPR002867 | - | |
Blo01g00201 | 864 | Pfam | IBR domain, a half RING-finger domain | 421 | 468 | IPR002867 | - | |
Blo01g00201 | 864 | Pfam | Ariadne domain | 491 | 652 | IPR045840 | - | |
Blo01g00201 | 864 | ProSiteProfiles | Zinc finger RING-type profile. | 273 | 317 | IPR001841 | - | |
Blo01g00201 | 864 | Coils | Coil | 490 | 510 | - | - | |
Blo01g00201 | 864 | MobiDBLite | consensus disorder prediction | 660 | 700 | - | - | |
Blo01g00201 | 864 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 267 | 357 | IPR013083 | - | |
Blo01g00201 | 864 | SMART | zf_4 | 699 | 723 | IPR001876 | - | |
Blo01g00201 | 864 | SUPERFAMILY | RING/U-box | 423 | 471 | - | - | |
Blo01g00201 | 864 | SUPERFAMILY | RING/U-box | 270 | 351 | - | - | |
Blo01g00201 | 864 | SMART | ibrneu5 | 408 | 478 | IPR002867 | - | |
Blo01g00201 | 864 | SMART | ibrneu5 | 342 | 404 | IPR002867 | - | |
Blo01g00201 | 864 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 176 | 672 | IPR031127 | GO:0004842|GO:0016567 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00201 | Blo-Chr1:2657711 | Blo18g00504 | Blo-Chr18:6355363 | 0 | dispersed | |
Blo01g00201 | Blo-Chr1:2657711 | Blo17g00514 | Blo-Chr17:8162243 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo01g00201 | K11968 | - | vvi:100257000 | 937.176 |