Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00258 ATGGAGTTTGTGCCAAAAGCAAAAGGGTACTCTGATAGAGAGAAGGCCGAAGAAGAAGAAGAGATACAAGGTAGCTCTTCTGCTTACAAGCTTTCATTTTCTTCTGACTCTCAATCTTCTCCTTCAGCATATAAGCTATGGCAAGGGAATTGTCAATCTGAATACGGGGCTTCAAGATCTTACAATATGAATGAACTCCCTTCACCAGAAACCGCCATTGACGGCTACGAGAAGCTTCAGGCAGTAGACTTATCACTGCGAATTGACAACGACATAGGAGGTGAAATCGACGGAGATCGAAGCTTTGGCCATGGAGATTGCAGCGAAAAAGAACACATGTTTGATAAGGTAGTGACACCCAGTGATGTTGGAAAGCTAAATCGTTTAGTAATTCCAAAGCAACAAGCGGAGAAATACTTCCCTCTTGATTCGTCGTCAAACGAAAAGGGTTTGATTTTGAATTTCGAAGATCGAAACAGAAAATCATGGCGGTTTCGTTATTCTTACTGGAACAGTAGCCAGAGCTACGTGATGACAAAAGGATGGAGTAGGTTTGTGAAAGAAAAGAAGCTAGTTGCTGGGGATGTCGTTTCATTTGAACGGGGAGTGGGAGAGGTTGGAAAGCATCGTCTTTTCATTGACTGGAGGCGCCGCCCAGATGCGCCGCTCCATCTGGCGGCGCTCGCTCATCTTCCTCAGACAATGAAATGGGGAAGTAGACAGCTGATCCCTCCGTCAATGGCGGCGCTCCCTCCCCACCATTACCACCATTTTCAAAACCCAAATTACAATACGATCAATCCGCATTATTATCAAAATGGAGCTTCAGAATACTTCAATGGAGGAACCTTCGAATCAGGTTCTCTTTATTACTTAAGGCCGTCTTCTTCTTACGCCATCGGAGGACTACAACAAGGTGTGGAAGCTTCTCCAATGGTGATCGATTCTGTGCCAGTAGTCCACCATGGAAAATCTAAACCTAAACGGCTTAGACTGTTTGGTGTGAATTTGGAGTGTCCTGTATCAGAAGAACCCATTACTACTCCTCATTTTTCAAGCTCCTCTTCAAGTCCTCAACCGCCATTTTTAATCGAGTATTCAGCAAGAGGAAAAGCTTCCTCCTCCCTCCAATGGAATCCGCATTGA 1146 44.76 MEFVPKAKGYSDREKAEEEEEIQGSSSAYKLSFSSDSQSSPSAYKLWQGNCQSEYGASRSYNMNELPSPETAIDGYEKLQAVDLSLRIDNDIGGEIDGDRSFGHGDCSEKEHMFDKVVTPSDVGKLNRLVIPKQQAEKYFPLDSSSNEKGLILNFEDRNRKSWRFRYSYWNSSQSYVMTKGWSRFVKEKKLVAGDVVSFERGVGEVGKHRLFIDWRRRPDAPLHLAALAHLPQTMKWGSRQLIPPSMAALPPHHYHHFQNPNYNTINPHYYQNGASEYFNGGTFESGSLYYLRPSSSYAIGGLQQGVEASPMVIDSVPVVHHGKSKPKRLRLFGVNLECPVSEEPITTPHFSSSSSSPQPPFLIEYSARGKASSSLQWNPH 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3310680 3311825 + BLOR00258 Blo01g00258 54698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00258 381 MobiDBLite consensus disorder prediction 1 24 - -
Blo01g00258 381 SUPERFAMILY DNA-binding pseudobarrel domain 110 220 IPR015300 -
Blo01g00258 381 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 75 359 IPR044800 GO:0003700
Blo01g00258 381 Gene3D - 107 226 IPR015300 -
Blo01g00258 381 Pfam B3 DNA binding domain 114 218 IPR003340 GO:0003677
Blo01g00258 381 MobiDBLite consensus disorder prediction 1 42 - -
Blo01g00258 381 CDD B3_DNA 112 201 IPR003340 GO:0003677
Blo01g00258 381 SMART B3_2 114 219 IPR003340 GO:0003677
Blo01g00258 381 ProSiteProfiles B3 DNA-binding domain profile. 114 219 IPR003340 GO:0003677
Blo01g00258 381 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 75 359 - -
Blo01g00258 381 MobiDBLite consensus disorder prediction 25 42 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00258 Blo12g00198 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00258 Blo-Chr1:3310680 Blo19g00130 Blo-Chr19:3745824 7.11E-85 dispersed
Blo01g00258 Blo-Chr1:3310680 Blo12g00198 Blo-Chr12:12940147 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11819 PF02362 B3 5.90E-28 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00258 - - vvi:100259130 323.939