Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00271 ATGGAAGAAGGTAGGAACATAGACCGTGATGCTACTCTTGAATCGTCTTCTTCCTCGTCTTCCTCTTCTTCTTCTTCTTCTTCTTCAACCTCCATTTCCAAGAGTTGTGGAGCTGATAAAGAATTCATTCATGGCGGGGAGAAGATGAAGAAGACAAGTGATGAGAAGCATCCCACGTACAGAGGAGTGAGAAGGAGGAACTGGGGAAGATGGGTTTCTGAAATCAGAGAGCCGAAAAAAAAATCTAGAATTTGGCTAGGAACTTACGCTACTCCTGAAATGGCGGCTCGGGCCCATGACGTAGCTGCTCTGGCCATTAAAGGTCGCAAAGCTTACCTCAATTTCCCCGAACTCGAACCGGACCTCCCTCGCCCTCTCTCCACCTCTCCGAAAGACATTCAGGCCGCCGCCGCACAAGCCGCCTCCGGAAAGTTTGAACCGACGAAACAATCCAAAGACGAAGCAGAGCCGAGCCAATCTGATGAGCTTTCTACGGTGAACCGAGAGAATCCTGCAACCCCTTCTCCAAATAACGAAGATGAAGCGTTGTTTGACCTACCGGATTTGTTCGTAAACGGGTCGGATCTAACCAACGGGTTTTCCAACTCTTCTTCTCCTTCATGGCAATGGCAATTATGTGGAGCAGATCCTGGCTTTCGGGTGGACGATCCATATTATTTGTGGTAG 687 48.91 MEEGRNIDRDATLESSSSSSSSSSSSSSSTSISKSCGADKEFIHGGEKMKKTSDEKHPTYRGVRRRNWGRWVSEIREPKKKSRIWLGTYATPEMAARAHDVAALAIKGRKAYLNFPELEPDLPRPLSTSPKDIQAAAAQAASGKFEPTKQSKDEAEPSQSDELSTVNRENPATPSPNNEDEALFDLPDLFVNGSDLTNGFSNSSSPSWQWQLCGADPGFRVDDPYYLW 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3437794 3438480 + BLOR00271 Blo01g00271 54711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00271 228 MobiDBLite consensus disorder prediction 40 61 - -
Blo01g00271 228 MobiDBLite consensus disorder prediction 117 183 - -
Blo01g00271 228 ProSiteProfiles AP2/ERF domain profile. 59 116 IPR001471 GO:0003700|GO:0006355
Blo01g00271 228 MobiDBLite consensus disorder prediction 11 36 - -
Blo01g00271 228 Pfam AP2 domain 58 108 IPR001471 GO:0003700|GO:0006355
Blo01g00271 228 Gene3D AP2/ERF domain 59 117 IPR036955 GO:0003700|GO:0006355
Blo01g00271 228 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 15 205 - -
Blo01g00271 228 MobiDBLite consensus disorder prediction 160 177 - -
Blo01g00271 228 SMART rav1_2 59 122 IPR001471 GO:0003700|GO:0006355
Blo01g00271 228 CDD AP2 60 118 IPR001471 GO:0003700|GO:0006355
Blo01g00271 228 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Blo01g00271 228 PRINTS Ethylene responsive element binding protein signature 82 98 IPR001471 GO:0003700|GO:0006355
Blo01g00271 228 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 205 - -
Blo01g00271 228 SUPERFAMILY DNA-binding domain 59 116 IPR016177 GO:0003677
Blo01g00271 228 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00271 Blo-Chr1:3437794 Blo02g01028 Blo-Chr2:39982096 1.15E-45 dispersed
Blo01g00271 Blo-Chr1:3437794 Blo01g00519 Blo-Chr1:5705740 1.78E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11821 PF00847 AP2 9.10E-15 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00271 - - twl:120004325 202.986