Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo01g00317 | ATGGTGATTCAGCTGAAACAAGAGTTAATCATGAATAGCTTCAAAACCATCGATGGCCGTGGGGTCAACGTCCACATCGCAAATGGAGCTTGTATTACTATCCAATACATCACCAATGTCATCATCCACGGCCTCCACATCCACGATTGCAAGCCCACTGGCAACGCCATGGTGAGGAGCTCGCCCAGCCATTTCGGGTGGAGGACGATGGCTGATGGCGACGGCATCTCCATTTTCGGGTCGAGCCATATATGGGTTGATCACAACTCGCTTTCTCACTGCGCTGATGGTCTTGTTGACGCTGTGATTGGCTCAACTGCAATTACAATTTCAAACAATCACTTCACCCACCACAACGAGGTGATGCTACTGGGTCACAGTGATTCGTACACAAAAGATAAGGATATGCAAGTCACCATCGCTTACAACCATTTTGGAGAAGGACTCATTCAGAGAATGCCAAGGTGTAGACATGGGTATTTCCATGTGGTGAACAATGACTACACCCACTGGGAAATGTACGCAATTGGGGGAAGTGGCAACCCCACCATCAACAGCCAGGGCAACAGATATGCAGCTCCATCAAACCCCTTTGCAAAGGAGAAGAAACTCATAATGCGGTTTCTGAAAATCTGTCCTTTGCAGGTGACAAAGAGGGTTGAAACAGCAGAAAGCCAGTGGAAGAACTGGAACTGGAGATCAGAGGGAGACATGTTACTAAACGGAGCATATTTCACTCCGTCTGGCGCTGGAGCTTCTTCAAACTACGCCAAGGCCTCAAGCTTGGGCGCTAAGTCTTCCTCCATGGTTGCCTCCATTACGTCCGGCGCTGGTGCTCTTCCCTGCCGCAGAGGCCATCAGTGTTAG | 867 | 49.48 | MVIQLKQELIMNSFKTIDGRGVNVHIANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDGISIFGSSHIWVDHNSLSHCADGLVDAVIGSTAITISNNHFTHHNEVMLLGHSDSYTKDKDMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSGNPTINSQGNRYAAPSNPFAKEKKLIMRFLKICPLQVTKRVETAESQWKNWNWRSEGDMLLNGAYFTPSGAGASSNYAKASSLGAKSSSMVASITSGAGALPCRRGHQC | 288 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 3884213 | 3885278 | - | BLOR00317 | Blo01g00317 | 54757 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo01g00317 | 288 | PANTHER | PECTATE LYASE 18-RELATED | 1 | 285 | IPR045032 | GO:0030570 | |
Blo01g00317 | 288 | SMART | amb_all | 1 | 197 | IPR002022 | - | |
Blo01g00317 | 288 | PANTHER | PECTATE LYASE | 1 | 285 | - | - | |
Blo01g00317 | 288 | PRINTS | Pollen allergen Amb family signature | 259 | 282 | IPR018082 | - | |
Blo01g00317 | 288 | PRINTS | Pollen allergen Amb family signature | 174 | 193 | IPR018082 | - | |
Blo01g00317 | 288 | PRINTS | Pollen allergen Amb family signature | 152 | 171 | IPR018082 | - | |
Blo01g00317 | 288 | PRINTS | Pollen allergen Amb family signature | 8 | 24 | IPR018082 | - | |
Blo01g00317 | 288 | PRINTS | Pollen allergen Amb family signature | 72 | 93 | IPR018082 | - | |
Blo01g00317 | 288 | Pfam | Pectate lyase | 8 | 189 | IPR002022 | - | |
Blo01g00317 | 288 | Gene3D | - | 1 | 281 | IPR012334 | - | |
Blo01g00317 | 288 | SUPERFAMILY | Pectin lyase-like | 1 | 288 | IPR011050 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00317 | Blo-Chr1:3884213 | Blo10g00608 | Blo-Chr10:18580162 | 1.39E-178 | dispersed | |
Blo01g00317 | Blo-Chr1:3884213 | Blo12g00125 | Blo-Chr12:8720829 | 0 | wgd | |
Blo01g00317 | Blo-Chr1:3884213 | Blo07g01064 | Blo-Chr7:30485130 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo01g00317 | K01728 | - | qsu:112029642 | 526.939 |