Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00357 ATGGAGTTTTCTCAGGAAGATATCGACCGCCTCCTCCTGTTCGAGCACACCAGAAAAGTTGCCGAAGTTAACTATGCCAAGGACCCTCTTGACGCCGATAATCTATTGAAGTGGGGAGGAGCATTGCTTGAATTGTCACAGTTCCAAAATGTTGCAGACTCCAAGGCTATGATCAAAGATGCTGTGCTAAAGCTGGAGGAGGCTTTGCAAATCAATCCCGTCAAGCACGAAGCCTTATGGTGTCTGGGAAATGCTCACACCTCTCATGCATTTCTAACGCCCAACCCTGAAGAGGCAAAAGTTTATTTTGATCAAGCACATGAATGCTTCCAAAAAGCTGTTGATGGGGACCCCAGTAATGAACTCTATCTCAAGTCTTTGGAAGTCACAACAAAGGCACCAGAGTTTCACTCGGAGCTACACAAGCATGGGCTTGAGCAACAGATTGCTGGCGGGCCATCTGCTACTTCTGCATCTGCTTCTTCAATTCCAAAGAGTTCAAAGAAGAAGAAGAAGAGTGATGATTTCAAATACGACATATTCGGATGGATAATACTGGCGGTCGGGATTGTTGCATGGGTAGGAATGACGAAGTCCCATATTCCTCCACAGCCTCCCAAAAACATAGTTGAGATCTTCCAAAGACTGGAATTCTCAGCCTGGAAAATGCAGAGAAAAAAGAAAAATTCTGGAAGAAATGGTTCACGAGAGCTTGCCAATTCCAAGGTCTCAAGAGCTCAAAGGAAGGTTTTAGAGAGTTCACAGGACACAGAAAATAACTTATCAGAACTAATTGCATCTTCAGCTAGAAAACAGGCTCATGTTGAAGTGTTTCCGAAAAAGAGTGTGGAATCTAAGTATTGTTCATTAAGAGATGAGACTTCCGGTGCTTGTTTAGCTCCTGAGGCAACTAATACTGTGTCTTGTCAGAGTTATCATCATGAACTTTCTCATTCTGGTTCAGAATCTATCTTTTCTCCTTCTTTTCACATATCTAAACACGCCGATGCGGACATGCCTGAGGGAGTTGCATTTATTAAGTTCTTTCAGAGTGGAAATCAGAAATTCCATCGAGATAGTGGACTAATGAATGCAGAGTTTGATAAATTAGAGGGAGAAGCTCTATCATCTGAAGTCTCAGCGATATATTTAGCTATGAAAAACTCTAGGCTGGAATGTGTTGATGAGCATGATCAAAATCACCTTTCTACTGAAGGATGCATGCAGGAGGATGAAGATGAAGAGTTTGATGATTTTGATCCTTATTTCTTCATCAAGAACTTGCCAGAGTTGTCAGCAGTAGTCCCAACTTATCGTCCTCTGCTTCTACCCAAACAGACACGGAGTTGCCCTCCCACTACTCTTGTTTTAGATTTGGATGAGACTTTGGTGCATTCAACTCTAGAACCTTGTGACGATGCAGACTTTACTTTTCCCGTCAATTTTAACCTCCAGGAACACACAGTTTATGTTCGATGCCGCCCTTATCTTAAAGATTTTATGGAGAGGGTTTCTGGACTTTTTGAGATTATTATTTTTACCGCTAGTCAAAGCATTTATGCTGAGCAACTCTTAAATGTTCTTGATCCAAAGAGAAAGACCTTTAGACATCGTGTCTTTCGTGAATCTTGTGTTTTTGTTGATGGGAATTACCTCAAAGATTTATCCATTCTTGGTCGAGATTTGGCACATGTGATTATAGTTGACAACTCTCCACAGGCATTTGGGTTTCAAGTGGACAATGGGATACCAATAGATAGCTGGTTTGATGATCGTTCAGATAAAGAGCTGCTTTTATTGCTACCATTCTTGGAGAGCTTGATTGGGGTTGAAGATGTTCGACCGATGATAGCTGGAAAGTTCAACACTAGGGAAAAAATAGCTGCAGCCGTTTATCCTTGCCAAAATACCAACAGAGGCGAGAATTTTGAAAGGAGTTCTGCATGTAAGATGGTGCGTACACTAGTTCAACTTATGAGAACTCTGGATAGGATGCCTGAAGAGCGCGCTATATTGATGAAACTTCTCTACTATGATGATGTTACGCCAGTGGATTATGAACCTCCATTTTTCAGATGCTGCCTAGAGGGCGAAGCTCATAATCCATGGGCTAGAAATCCTCTGAAAATGGAGGTTGGGAATGTCAACAGCAAGCATTTTGTACTGGCTCTTAAAGTACAGAGTATACTTGATCCGTGTGACGATGAAAATCATGAGATAGAAGATAATGAAGTGAGTCTAGGAGCTGATTCTGTTGAGAAGGGAGAATACTCTGAATCTGATAGCGAGGTTGATCATTTACCAGACGGCAACTATGTAGTTGCACCAGTTGGTAGATTACATAAAGTGTTTTTATGTCATCTTCTCCTTCAGTTTCTGAGGTTCAATGATAAGCAGCAAAAGCAGGAAGGCGTTGGCGATGGCGTTGGCGATGAAGATGATACTCAGGATCCAGAGGAAAATGAACAACAGATGAACCGAGTGAAGGATTGGATCCAGAATCGCCACCTGGACACCATAGAACTAACAGATATTCTGTCACATTTCCCAGACATCTCAGTGGTTCTCACTGAAGTTATTAAGTGGATGATTCCAGAAATAATGGATAAGCTAGTTAATGAAGGTTTTCTGTCAAAGACTCGAATGGACTCATATACGATTAACAGGCATAAGGTCTTCGACTATGAATTTACAACTGTGAAAGATGAAATGGATGGTCAAACAATTCCCGTTGGTGACAAAGCTCCAAAAGGAGATGATCACTTGTATACGAAGGCTCTGTATCATGCTCTTCCGATGAAATATGTGACTGTTACAAAATTGCAAGCTATGCTCGAAGGACAGGTTAATCAGACTACTGCACGAAAATTAATTGATAAAATGACCCGAGATGGTTTTCTTGAAGCCAAAGGAAATCGACGGCTAGGTGCATGCCAAATTGAAAGATTTAAACTTGGTTTTTCTATACTAAAGAAAAAACGGGTTAACATTTTGCAACTTGCTCGCACAGGCAAGCGTGTAATTCACTCTGATATGACCGAGAAAAAGCTGATTGAAGTAAAGATAGCTTTAAACGACGACGCAATGGAAGTTGACAAGGAACCTCATAAGAGGCCACACCATCTAGATATCTCCACGATAGGTTCGGGTAGTAACTACAAAGACATGTCTACATGCGGCCTCCTCCATTCCATAGGATCAGACCTCACACGTATGAAAGTGAGATCTGACACTGTGCAAAATGGTTCGATGAGGAGTGAACAGACTATTACAAAGCTTGGAAACACTCCTACGAGCAGAGATGAGCCAGTGACTTCAAGAGAGAGCTTTGTACCGGGAAATGAGAAGAACCGAGCCAATGGAAATGTCGAAGAGGTGGATGTGGTTATATGTAGATCAACTCAAGACAAGCGGTCAAGGAAGACAAGCACTGTATTTCAGTTTTTCCTCTCATAG 3456 41.75 MEFSQEDIDRLLLFEHTRKVAEVNYAKDPLDADNLLKWGGALLELSQFQNVADSKAMIKDAVLKLEEALQINPVKHEALWCLGNAHTSHAFLTPNPEEAKVYFDQAHECFQKAVDGDPSNELYLKSLEVTTKAPEFHSELHKHGLEQQIAGGPSATSASASSIPKSSKKKKKSDDFKYDIFGWIILAVGIVAWVGMTKSHIPPQPPKNIVEIFQRLEFSAWKMQRKKKNSGRNGSRELANSKVSRAQRKVLESSQDTENNLSELIASSARKQAHVEVFPKKSVESKYCSLRDETSGACLAPEATNTVSCQSYHHELSHSGSESIFSPSFHISKHADADMPEGVAFIKFFQSGNQKFHRDSGLMNAEFDKLEGEALSSEVSAIYLAMKNSRLECVDEHDQNHLSTEGCMQEDEDEEFDDFDPYFFIKNLPELSAVVPTYRPLLLPKQTRSCPPTTLVLDLDETLVHSTLEPCDDADFTFPVNFNLQEHTVYVRCRPYLKDFMERVSGLFEIIIFTASQSIYAEQLLNVLDPKRKTFRHRVFRESCVFVDGNYLKDLSILGRDLAHVIIVDNSPQAFGFQVDNGIPIDSWFDDRSDKELLLLLPFLESLIGVEDVRPMIAGKFNTREKIAAAVYPCQNTNRGENFERSSACKMVRTLVQLMRTLDRMPEERAILMKLLYYDDVTPVDYEPPFFRCCLEGEAHNPWARNPLKMEVGNVNSKHFVLALKVQSILDPCDDENHEIEDNEVSLGADSVEKGEYSESDSEVDHLPDGNYVVAPVGRLHKVFLCHLLLQFLRFNDKQQKQEGVGDGVGDEDDTQDPEENEQQMNRVKDWIQNRHLDTIELTDILSHFPDISVVLTEVIKWMIPEIMDKLVNEGFLSKTRMDSYTINRHKVFDYEFTTVKDEMDGQTIPVGDKAPKGDDHLYTKALYHALPMKYVTVTKLQAMLEGQVNQTTARKLIDKMTRDGFLEAKGNRRLGACQIERFKLGFSILKKKRVNILQLARTGKRVIHSDMTEKKLIEVKIALNDDAMEVDKEPHKRPHHLDISTIGSGSNYKDMSTCGLLHSIGSDLTRMKVRSDTVQNGSMRSEQTITKLGNTPTSRDEPVTSRESFVPGNEKNRANGNVEEVDVVICRSTQDKRSRKTSTVFQFFLS 1151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4233062 4246522 - BLOR00357 Blo01g00357 54797

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00357 1151 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 453 617 IPR011948 GO:0016791
Blo01g00357 1151 SMART forpap2 451 595 IPR004274 -
Blo01g00357 1151 PANTHER INTERACTING FACTOR, PUTATIVE, EXPRESSED-RELATED 223 631 - -
Blo01g00357 1151 Pfam NLI interacting factor-like phosphatase 454 614 IPR004274 -
Blo01g00357 1151 MobiDBLite consensus disorder prediction 1093 1118 - -
Blo01g00357 1151 Gene3D Tetratricopeptide repeat domain 1 150 IPR011990 GO:0005515
Blo01g00357 1151 SUPERFAMILY TPR-like 25 127 IPR011990 GO:0005515
Blo01g00357 1151 MobiDBLite consensus disorder prediction 224 256 - -
Blo01g00357 1151 ProSiteProfiles HORMA domain profile. 484 726 IPR003511 -
Blo01g00357 1151 CDD HAD_FCP1-like 454 585 - -
Blo01g00357 1151 MobiDBLite consensus disorder prediction 1093 1116 - -
Blo01g00357 1151 Gene3D HORMA domain 622 769 IPR036570 -
Blo01g00357 1151 Pfam HORMA domain 645 719 IPR003511 -
Blo01g00357 1151 MobiDBLite consensus disorder prediction 801 824 - -
Blo01g00357 1151 Gene3D - 438 620 IPR023214 -
Blo01g00357 1151 SUPERFAMILY HAD-like 442 618 IPR036412 -
Blo01g00357 1151 ProSiteProfiles FCP1 homology domain profile. 448 607 IPR004274 -
Blo01g00357 1151 SUPERFAMILY The spindle assembly checkpoint protein mad2 637 733 IPR036570 -
Blo01g00357 1151 MobiDBLite consensus disorder prediction 150 164 - -
Blo01g00357 1151 MobiDBLite consensus disorder prediction 149 170 - -
Blo01g00357 1151 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 223 631 - -
Blo01g00357 1151 Pfam Plant specific mitochondrial import receptor subunit TOM20 9 198 - -
Blo01g00357 1151 MobiDBLite consensus disorder prediction 234 256 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00357 K12778 HORMAD, HOP1; meiosis-specific protein K17616 qsu:112001538 591.652
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00357 Blo-Chr1:4233062 Blo11g00619 Blo-Chr11:6328673 1.45E-87 dispersed
Blo01g00357 Blo-Chr1:4233062 Blo07g01141 Blo-Chr7:31272745 1.90E-17 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1244 Blo01g00357 . . . Bpe13g00531 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002827 1 3 1 1 2 1 3 1 1 1 1 1 2 2 2 2 1 3 2 1 1 2 2 2 1 2 2 4 5 2 55
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g00357 Blo_Chr01 FPKM 13.129049 12.804321 14.142916 13.392588 11.156079 13.206518 11.690459 19.466618 17.481518 18.579803