Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00365 ATGTTCTCGTTTTCACTGCCGACTCCCGACAGGTCTCCCCTCCCTCTCTTCTTTCCAGTTTCCCACAAATCTGTCGCCCCATTTGAACCACGCTGCCTCTGCTTCGATCTGATGCAAATGCACCTTCCCTACTCCACGCCCTTTCCGAGGCCGTTTTATGATGCGTTCCCCGCCTCTTCTGCGTTTCTTCCGTGTGCTTTAAGTATGGATATCATTGAGGTTGAAGAAAATTTGTTTGCGATCAGTGATGCCAAGCTCCATGGAGAGATGTGCAAAAGGCTTTCTGCAATTTATTGCAAGGTGTTGTCTGTTTTCCCTTCGTTGGAGGCAGCAAAGCCAAGAAGTAAGTCAGGCATTCAAGCATTATGCTCATTGCATGTGGCACTAGAAAGGGCAAAAAATATTCTTCAACACTGCTCAGAATGTAGCAAACTATATTTGGCTATAACTGGAGAGTCTGTCCTTGCGAAATTTGAGAAAGCAAGATATTCTCTTCAAAACAGTCTCAGTAGTGTTGAAGATATCGTTACACAAACGATTGGCTCTCAGATACAGGAGATCATTGGCGAACTTGATGGAATGATGTTTGCTCTTGATCCATTGGAGAAGCAAGTAGGCAATGATTTGATCCTACTACTTCAGCAGGGAAGAAAATTCAATGACTCCAATGACAATAATGAGCTTGAATCTTTTCATCAAGCTGCATTAAGACTTGGTATAATCTCTTCTAGGACAGCCCTTACAGAGAGAAGAGCACTTAAGAAACTTGTTGAAAAAGCTCGTGCCGAAGAAGACAAGAGGAAGGAATCTATTGTCGCTTACCTTTTGCATCTCATGAGGAAATACTCCAAATTATTTCGGAATGAGTTTTCAGAGGACAACGACTCACAAGGTTCTACGCCAAGTTCACCTACTGTTCAAACAACACTTGATGACAGCAGTCCAAGTGGCAACAATCAAACCTTTGAAAGGCAGCTATCAAAGCTTAGTTCTTTTAATTTCAAGCCCAGTAATAAGAGATCAGGGCAGATGGCCCTCCCACCTGAGGAATTGAGGTGTCCAATATCATTGCACCTTATGTACGACCCTGTCATCATAGATTCTGGTCAGACATATGAAAAGATTTGTATCGAGAAATGGTTTAGCGATGGTCATAGCTCCTGCCCAAAGACTCAACAGAAGCTCTCTCATCTTTCTCTGACACCTAATTACTGCGTTAAGAGCCTCATTTCTAGTTGGTGTGAGCAGAATGGAGTTTCTCTTCCTGATGGTCCCCCAGAGAGTCTGGATTTCAATTATTGGAGACTTGCATTGTCTGAATGTGATTCTGTAAATTCAAGATCCATGGACAGTCTTAGCTCTTGCAAACTGAAGGGGGTTAAAGTTGTTCCATTAGAGGAGTGTTGTATCGTTGAGGAGACTGAAGGAAATGCAATAGATAGTTTATCAGCAGAGGCGCACGACTCTGGTTTTAATATATTTGATAAATACAAGTACTTTCTGATGGTTTTGAATGAAGGAGAAGACTTGAAGAAAAAGTGCGAGGTGGTTGAACAGATAAGGTTCTTACTGAAGGATGATGAGGAGGGCAGGATTCTTATGGGAGCTAATGGATTTGTTCAAGCACTCTTGCAGTTTCTAGAAGTAGCTGTGTATGAAGAGAATTCAAAAGCTCAAGAAAGTGGAGCCATGGCACTATTCAACCTTGCTGTCAACAATAACAGAAACAAGGAAATGATGTTGGAAGCCGGGGTTATTTCACTGTTGGAGCGAATGACCTTGAACCCCAACTCCCATGAATATGCAACAGCCCTCTATCTGAATCTTTCTTGCCTTGAAGATGCCAAGCCTGTCATTGGTTTGAGCTGTGCCGTCCCTTTCTTCAGCCATCTTCTTCAAACCAATGCAGGACCCGTCTGCAAGCTTGATGCGCTGCATGCTCTTTACAATCTATCTACTGTGCCCTCCAACATTTCTCATCTCCTTTCTGCCAGTGTCATAAGTGGCCTTCAATCCCTACTTGCAGATCCTGATGATCATGGATGGACCGAGAAAGCCATAGCAGTCCTGATAAATTTGGCTTTAACTCAATCAGGACGAGATGAAATGATATCGAGCCCCAGCCTTATCAATGCATTGGCAACAATTTTGGACACTGGCGATGCTGTAGAGCAGGAGCAATCTGTCTTGTGTCTGTTGATGTTGTGTGATGGAAACGAAAGATGCAGTCAAATGGTGCTACAAGAAGGGGTGATTCCTGGATTAGTGTCAATCTCTGTGAATGGGACTTTGAAGGGGAAGGAGAAGGCTCAAAAACTTTTGATGTTGTTCCGCGAACAAAGACAACGAAACCAGCCGCGGATGGAATGGGGTGAGAGTGGCGACATTTCCAATCCTCCCTCGGAATCAAAGCCGCTTTGCAAATCGATCTCGAGAAGAAAAATGGGAAAAGCTTTGAGCTTTTTATGGAAGAGCAAAAGCTATTCAAGTAAAGGTGATAGAATCGATTCCTGGACGATGCCAAAGTTTCCTCTCCTTGTCACGATCAATGATGCAGCTCATTCCAACATAATTTTTATTATCTTCTATCAAAATCAAACCCAGCAACATCACAGCAGCTCCATTTTCAACCAATTTGGGAGAATGCCACCGTCTCAATTTGTGAAGCATGGTATACCTGGAGATGGAAGATGCTTGTTCAGGTCTGTGGTTCATGGTGCTTGCCTTAATGCAGGGGGGCCAAAACCCGGGGAGAGTCTGCAGAGACAGCTTGCAGATGAGCTTCGCGCTAAAGTTGCAGATGAATTCATCAAGAGGCGAGCAGACTCCGAATGGTTTCTCGAGGGGGATTTTGACATGTACGTGGGACAGATGCGACAACCTCACCGTTGGGGGGGAGAGCCCGAGCTTCTAATGTCCACCCATATTCTACAGATGCCAATCGCAGTTTACATGTGGGAAAACAAGTGTGGAGGACTTCGAATAATAGCCGAATACGGTCAAGAATACGACAAGGGAAAAACAATCCGAGTCCTCTACGATGGTTGTGGGCACTACGATGCACTTAGAGGACACTCGTGA 3081 44.17 MFSFSLPTPDRSPLPLFFPVSHKSVAPFEPRCLCFDLMQMHLPYSTPFPRPFYDAFPASSAFLPCALSMDIIEVEENLFAISDAKLHGEMCKRLSAIYCKVLSVFPSLEAAKPRSKSGIQALCSLHVALERAKNILQHCSECSKLYLAITGESVLAKFEKARYSLQNSLSSVEDIVTQTIGSQIQEIIGELDGMMFALDPLEKQVGNDLILLLQQGRKFNDSNDNNELESFHQAALRLGIISSRTALTERRALKKLVEKARAEEDKRKESIVAYLLHLMRKYSKLFRNEFSEDNDSQGSTPSSPTVQTTLDDSSPSGNNQTFERQLSKLSSFNFKPSNKRSGQMALPPEELRCPISLHLMYDPVIIDSGQTYEKICIEKWFSDGHSSCPKTQQKLSHLSLTPNYCVKSLISSWCEQNGVSLPDGPPESLDFNYWRLALSECDSVNSRSMDSLSSCKLKGVKVVPLEECCIVEETEGNAIDSLSAEAHDSGFNIFDKYKYFLMVLNEGEDLKKKCEVVEQIRFLLKDDEEGRILMGANGFVQALLQFLEVAVYEENSKAQESGAMALFNLAVNNNRNKEMMLEAGVISLLERMTLNPNSHEYATALYLNLSCLEDAKPVIGLSCAVPFFSHLLQTNAGPVCKLDALHALYNLSTVPSNISHLLSASVISGLQSLLADPDDHGWTEKAIAVLINLALTQSGRDEMISSPSLINALATILDTGDAVEQEQSVLCLLMLCDGNERCSQMVLQEGVIPGLVSISVNGTLKGKEKAQKLLMLFREQRQRNQPRMEWGESGDISNPPSESKPLCKSISRRKMGKALSFLWKSKSYSSKGDRIDSWTMPKFPLLVTINDAAHSNIIFIIFYQNQTQQHHSSSIFNQFGRMPPSQFVKHGIPGDGRCLFRSVVHGACLNAGGPKPGESLQRQLADELRAKVADEFIKRRADSEWFLEGDFDMYVGQMRQPHRWGGEPELLMSTHILQMPIAVYMWENKCGGLRIIAEYGQEYDKGKTIRVLYDGCGHYDALRGHS 1026
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4283069 4291508 + BLOR00365 Blo01g00365 54805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00365 1026 Pfam U-box domain 348 417 IPR003613 GO:0004842|GO:0016567
Blo01g00365 1026 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 346 420 IPR013083 -
Blo01g00365 1026 CDD RING-Ubox_PUB 351 393 IPR045210 -
Blo01g00365 1026 SUPERFAMILY Cysteine proteinases 881 1023 IPR038765 -
Blo01g00365 1026 Gene3D - 500 616 IPR011989 -
Blo01g00365 1026 PANTHER U BOX DOMAIN-CONTAINING 69 788 - -
Blo01g00365 1026 MobiDBLite consensus disorder prediction 291 320 - -
Blo01g00365 1026 Gene3D - 871 1026 - -
Blo01g00365 1026 ProSiteProfiles OTU domain profile. 887 1025 IPR003323 -
Blo01g00365 1026 Pfam OTU-like cysteine protease 893 1015 IPR003323 -
Blo01g00365 1026 Gene3D - 617 779 IPR011989 -
Blo01g00365 1026 SUPERFAMILY ARM repeat 504 776 IPR016024 -
Blo01g00365 1026 SMART arm_5 573 611 IPR000225 GO:0005515
Blo01g00365 1026 SMART arm_5 612 653 IPR000225 GO:0005515
Blo01g00365 1026 SMART arm_5 527 571 IPR000225 GO:0005515
Blo01g00365 1026 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 69 788 - -
Blo01g00365 1026 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 538 584 IPR000225 GO:0005515
Blo01g00365 1026 ProSiteProfiles U-box domain profile. 346 420 IPR003613 GO:0004842|GO:0016567
Blo01g00365 1026 SMART Ubox_2 350 413 IPR003613 GO:0004842|GO:0016567
Blo01g00365 1026 MobiDBLite consensus disorder prediction 784 806 - -
Blo01g00365 1026 MobiDBLite consensus disorder prediction 292 320 - -
Blo01g00365 1026 SUPERFAMILY RING/U-box 340 423 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00365 Blo06g00829 CCT
Blo01g00365 Blo16g01194 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00365 Blo-Chr1:4283069 Blo16g01194 Blo-Chr16:40439448 0 dispersed
Blo07g01261 Blo-Chr7:32796452 Blo01g00365 Blo-Chr1:4283069 2.13E-12 transposed
Blo09g00257 Blo-Chr9:11440359 Blo01g00365 Blo-Chr1:4283069 1.38E-07 transposed
Blo01g00365 Blo-Chr1:4283069 Blo16g01191 Blo-Chr16:40421873 0 wgd
Blo01g00365 Blo-Chr1:4283069 Blo06g00829 Blo-Chr6:31531339 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00365 - - qsu:112018265 1110.13