Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00367 ATGGTTCTTGGTCTGAGAACGAGGTCTCAAAAAAGCATTTCAGTTCAGATCGATTACCTCATCAATGTGCAGGAGATTAATCCATGGACCTCTTCAGATGCTCGGATATCTGCCCAGTCCGTATTGCTTCAATGTGAAAATGGAGGTGAAAGTTGTGGGATCTTTGTATCATCTATTGGAGATGGCAAGATTGACTTCAGCAAGGCTTTCAGATTCACTGTAACTTTACTCGAGCAAGTATCCAAAAAAGGTGCGTCCCGCGATGGCTTCCAAAATAACTTCTTGGAGTTTCACTTGTACGAAGTACGCAAGGAGAAGAAGGGTAAGCTCTTGGGATCAGCTGCAATCAATCTTGCAGAATATGCAACTATCAGTGATAATGTAGCCTTGAACACTCCTGTACTCTTGAAGAAGACTTCTAAACATTCTGCACAACCAATACTTTATGTTAATATACAGACTCTTGATAAGGATAACTCTAGCTCTTCGCCAGAGAACAGCTTGTCAAAAGAAATGTCGGCAGCTGGATCTGTTTCAGAATTGATAGATGGAGGCAACGACAATGAAGCTGAAATTGCCTCATTTACAGATGATGACGATGATGGTTCTTCCTTGCATTCATCCCGGACTATCTCTACTCTTGAGACTACAATGGCATCACCCACGGATCTGGAATTGGGTAGTGATAGTGATGATAGAAATCGATTGGCTGAGGCCGTCAGACATCTGAGTGGTAGTTCATCCAGAACAGTTTCATCATCAGACATTCTCTCAGGTAAGAAGCTTTTAGGACGCGGTCCAAATTTTTCATCAGAACAACCAGTGGAGAGTGAAAGGGTTGCTGATGATAGCACTGGAATTCAAGAAATAACGACACAAGGTGATAATGACAGCATCACTAGCGGCCTTATTGGTAAAACCTCCGAAGATGATGTGCTGTCAGTTTTGAATTCTGATTCTACAACTAATGAGGAGGTTGATAGGAGACAAATCAAAGCAGACGAAGAGAAATACAAGTCTAGTGCCTTAAATTTGGCTTCTTTTGGAGACAAAGAGAAACAAGAGCAGCAAGAATGTGTAGAGGAAGAAACAGTTTCAGAGACGACAAAAAATCACATCGACAACCAAATAGCTCGTAAAATACCGGTAGATGCTGTCAAGAAGCTAGAAAAATTGAGTGATACTGTTGCATCGAGTAGGAATACCCTTGGCATACATGGAGGCGTTCTTAGGAATGATAAATTAAGGCATTTGAAGTCTCTTCAGTTGACTTTTGACTCTTCCAAGAGTGATGGAATTTTTGCCATTGATCTGATTAACAATCACAAAAAGAAAGACGTTTTGGAAAATGCTCCTAAAATTTCAGTCGCTAGGGACAGTGACAAGAAAGGTAGACATCAGGCTAAAGATCATGAAAAGGGTAATGATTTGTCAGAGACCAATATCAGTTCTATGACTACTGTCAATGATGAGAAGAATAATTACAATAGCAAACTCTCAGACAGCAAGACTGGATTGGAATCTGAAGTTGAAATGCTTCGAGAGGAGCTCAGAGAAGCTGCAACTGTTGAGATTTCACTTTATTCAGTTGTAGCTGAACATGGGAGTTCGGCTAATAAAGTACACGCCCCAGCAAGGCGCCTTTATAGGTTCTACTTCCATATTCTCAGATCAAAGTCTTCCAGCTCACTGGCTAGTGCTGCAAGGACAATTGTATCCGGATTAATTTTAGTTTCGAAATCATGTGGACATGACGTCCCAAGATTGACCTTTTGGTTGTCTAATGCAATTTTGTTGAGAGGAATGATCAAAAAGGCTGTTGAGAAACCGCAAATCTCTCCTGCACGACGCAAAACTAGCTATGCTGAAGAAAATTTAAATGACTGGGATGAACCCCAAATACTTATTACTGCAATGGAAAAGGTTGAAGCTTGGATATTTACTAGAATTGTTGAGTCTGTGTGGTGGCAGAGTCTAACTCCATACATGCAGTCTGCAGCATCTAAAGGTTCAAGCTCAAGAAAAACATCTGGAAAAAGATATGTTATGGGTGATCAAGATCAGGGTAAATTTTCTATAGATCTTTGGAAAAAAGCTTTTACAGATGCTGGTGAAAGGCTTTGTCCTCTTCGAGCTGGAGGGCATGAATGTGGGTGCTTGCATGTTATCACTAGATTGGTGATTGAACAACTGGTGAGTAGACTTGATGTTGCAATGTTCAATGCTATTCTTCGAGAATCGGCCGATGAAATGCCGACAGACCCTTTTTCTGACCCTATAAGTGATTCCAAGGTTCTCCCGATTCCTGCAGGAAAATCAAGCTTTGGTTCTGGTGCACAGCTGAAAAATGCTGTTGGAAACTGGTCGAGATGCCTTACAGATTTGTACGGCATTGATGATAGTGATTCTCTTGGAGATAGAAATGAACTTGATGATAATTACGAGGAGGAGGCACCTTTCAAGGTTTTCAACCTCCTCAATGCTTTGAGTGACCTTATGATGCTTCCGTTTGAAATGTTGGCAGAACGGTCCACCCGGAGAGAGGTATGCCCCAACTTGGGAGTTCCCTTGATCAGAAGAGTTCTTAGCAATTTTGTTCCAGATGAATTCTGCCCATCCCCTGTTCCAGAAGCTCTTCTTGACGCCCTTCATTCCGAGGACTGCATTGAAGGTGATGAAAAGTCTGTTGCAAGTTTCCCTTGTGTGGCCTCACCCACCACGTATTCACCACCATCAGCTTCATCATTGAGAGAGGTTGGAAGCATAACATGGCAGAGTAGTGGCTCGCCAATGCTTCGAAAATCATACACTAGCGACGATGAGCTTGACGAGTTGGATTCACCCTTAAATGCTCTTATCATTGAAAAAACTCGCAGCTCCCCGACTTCGACGGGTTCCAATTTGCTGCCCAAGGAAAAGGGTGGTCGTAGAGTTGTCCGATATGAACTTCTACGAGAAATATGGGGGGATAATCACTAG 2979 42.2 MVLGLRTRSQKSISVQIDYLINVQEINPWTSSDARISAQSVLLQCENGGESCGIFVSSIGDGKIDFSKAFRFTVTLLEQVSKKGASRDGFQNNFLEFHLYEVRKEKKGKLLGSAAINLAEYATISDNVALNTPVLLKKTSKHSAQPILYVNIQTLDKDNSSSSPENSLSKEMSAAGSVSELIDGGNDNEAEIASFTDDDDDGSSLHSSRTISTLETTMASPTDLELGSDSDDRNRLAEAVRHLSGSSSRTVSSSDILSGKKLLGRGPNFSSEQPVESERVADDSTGIQEITTQGDNDSITSGLIGKTSEDDVLSVLNSDSTTNEEVDRRQIKADEEKYKSSALNLASFGDKEKQEQQECVEEETVSETTKNHIDNQIARKIPVDAVKKLEKLSDTVASSRNTLGIHGGVLRNDKLRHLKSLQLTFDSSKSDGIFAIDLINNHKKKDVLENAPKISVARDSDKKGRHQAKDHEKGNDLSETNISSMTTVNDEKNNYNSKLSDSKTGLESEVEMLREELREAATVEISLYSVVAEHGSSANKVHAPARRLYRFYFHILRSKSSSSLASAARTIVSGLILVSKSCGHDVPRLTFWLSNAILLRGMIKKAVEKPQISPARRKTSYAEENLNDWDEPQILITAMEKVEAWIFTRIVESVWWQSLTPYMQSAASKGSSSRKTSGKRYVMGDQDQGKFSIDLWKKAFTDAGERLCPLRAGGHECGCLHVITRLVIEQLVSRLDVAMFNAILRESADEMPTDPFSDPISDSKVLPIPAGKSSFGSGAQLKNAVGNWSRCLTDLYGIDDSDSLGDRNELDDNYEEEAPFKVFNLLNALSDLMMLPFEMLAERSTRREVCPNLGVPLIRRVLSNFVPDEFCPSPVPEALLDALHSEDCIEGDEKSVASFPCVASPTTYSPPSASSLREVGSITWQSSGSPMLRKSYTSDDELDELDSPLNALIIEKTRSSPTSTGSNLLPKEKGGRRVVRYELLREIWGDNH 992
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4291730 4295970 - BLOR00367 Blo01g00367 54807

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00367 992 MobiDBLite consensus disorder prediction 241 257 - -
Blo01g00367 992 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 991 - -
Blo01g00367 992 Coils Coil 496 523 - -
Blo01g00367 992 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 56 157 IPR019448 -
Blo01g00367 992 MobiDBLite consensus disorder prediction 478 502 - -
Blo01g00367 992 ProSiteProfiles C2 NT-type domain profile. 7 156 IPR019448 -
Blo01g00367 992 MobiDBLite consensus disorder prediction 241 305 - -
Blo01g00367 992 MobiDBLite consensus disorder prediction 450 477 - -
Blo01g00367 992 MobiDBLite consensus disorder prediction 450 502 - -
Blo01g00367 992 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 991 IPR021827 GO:0005643
Blo01g00367 992 MobiDBLite consensus disorder prediction 284 305 - -
Blo01g00367 992 MobiDBLite consensus disorder prediction 156 211 - -
Blo01g00367 992 MobiDBLite consensus disorder prediction 156 174 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00367 - - - mesc:110629355 870.922
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00367 Blo-Chr1:4291730 Blo18g00302 Blo-Chr18:3142888 1.01E-40 dispersed
Blo01g00367 Blo-Chr1:4291730 Blo17g00324 Blo-Chr17:3382653 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1175 Blo01g00367 . Bda01g02185 . Bpe13g00526 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0738 . . . . . . . . . . . Bma01g00019 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0016656 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 7
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g00367 Blo_Chr01 FPKM 112.71859 102.06456 156.332352 153.031494 81.669197 65.083969 74.159454 82.97718 81.813103 87.406227