Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00374 AAAGCGGGGAAAATGGGCGATGGAGATATGAGCAAGAAAATGGCGAAGCACAACAGAGAAAGGAGCGTGCTTGCTGTCGCAGGAGCCGCTGCTCTGCTCGCTCTCGCCGTGAACTTCGCTATCTCTGCTTTTAACAAGCAAAGGAAGAAACCAGATCTTCCGGGATCCAAGCTTCGCCTTAATTTATCAGCTTCCGAGATTCTTAAATTAGCTGGAAGAATCATCGCCCGGTCGAAGGAGGTTCACGACGCAGTTGCTTCAGTTCCCCTTGATAAGGTTACTTATGCCAATGTTATTTTACCATTTGCTGAACTCGAGGCAGAGCAATTTCCGTTGATCCAATCTTGTGTGTTCCCAAAATTAGTTACTACCTCAGATGATGTACGGAAAGCTAGTGCTGAAGCTGAACGGAAAATAGATGCTCATATTCAGATATGCAGCAAGCGTGACGATGTGTACCGTGTTGTCAAAGCTTTTGCTGCTCGAGGAGAGTGGATAAATTCTGAAGCAAAATGCTACATACAATACCTAGTGGGAGACTTTGAGCAAAATGGGTTGAACCTTACCTCGATGAAGAGGGAGGAAATTGAGCGATTGAGGCAGCAAATTGATTCATTAAGCCTACAATATATTCAAAATCTCAATGATGATTGTAGTTTTCTTCTATTTAATGAGGCAGAGCTAGCTGGTTTACCAGAAGAAATACTCAAGAATTTGACAATTTCTAAAAATGGAAAATTCAAGTTGCCCATGAAAAGTCATCACATTGCTGTAGTTCTGGAGCATTGTAAGGTTGGAACAACTAGAAGGATGGTAGCAGCAGCATATGGGAGGAGGTCTGGAGAAGTAAATCTTTCTGTTTTAGAAAATTTGGTGCAGTTACGCCATAAATTGGCACGTTTACTTGGCTATTCAAACTATGCTGACTACGCCGTTGACCATAGAATGGCAAAGACACCTTCAAAGGTATTTGAATTCTTGGAGAATATTTCTACCAGTTTGACCGATTTGGCTTCCAGAGAACTTGCTACTTTAAAGGAGTTAAAGAAGAACGAGGAAGGAGATTTTCCGTTTGGGATGGAAGATCTTTTATACTATGTCAAGAAGGTAGAAGAGCAACATCTTAATATGGATTTTGTGGCTCTTAAGCAATACTTTCCTATCAGATTGGTTCTATCTGGTGTCTTTAAAATAGTCCAAGATCTTTTTGGTTTAAGGTTAGAGGAAGTGACTGATGCTGAAGTTTGGCATAGTGATGTAACATTGTTTTCAGTTTTTGACTTAAATTCTGGTGAACTAATGGGTTATTTCTACCTTGATATGTACACAAGGTTCGGAAAGTATGGTCATACCTGTGTGGTGGCTCTTCAAAATAGTGCATTGTGTTACAATGGTGCACGTCAGATACCGGTGGCATTATTGATAGCTCAGTTTCACAAGGATGTTGATGAACGTCCCGGGTTACTAAGATTCTCTGAAGTGGTTAATCTTCTCCATGAGTTTGGTCATGTGGTCCAACATATTTGCAACCGTGCATCATTTGTTCGATTTTCAGGCCTTCGTGTGGACCCAGATTTTGTTGAGATTCCTTCTCAAATGCTAGAAAATTGGTGTTACGAAAGCTTGTCTTTAAAATTGTTATCTGGTTTCCATCAGGATATTACGAAGCCTATCAAAGATGAAACTTGTGAATCACTAAAAAGATGGCGATATTCCTTTTCTGCACTTAAATTAAAGCAGGAGATTCTTTATTGTCTTTTTGATCAGATAATACATTCTTCTGACAATATTGACATTGTTGAATTATTCAAGCATCTTCATCCGAAGCAATTACATTTGGTTGCATTACTCCAGGTGATGTTAGGGTTGCCAATGTTGGAGGGAGCCAGTCCAGCTTCATGTTTTCCACGTAGCGCTATTGGTTATGAAGCTGCATGTTACAGTCGTATTTGGAGTGAGGTCTTTGCATCTGATATATTTGTGTCGAAGTTTCGTGATGGTCTTTTGAGTCAACACGTTGGCATGCAGTTCAGAAACAAGGTATTGGCCCCAGGAGGAGCGAAGGAGCCTATCGAAGTGCTGAAGGATTTTCTGGGCAGAGAGCCATCGATTCATACTTTTGTGGCCATAAAATCTGAATATGGCTTTTGA 2151 40.68 KAGKMGDGDMSKKMAKHNRERSVLAVAGAAALLALAVNFAISAFNKQRKKPDLPGSKLRLNLSASEILKLAGRIIARSKEVHDAVASVPLDKVTYANVILPFAELEAEQFPLIQSCVFPKLVTTSDDVRKASAEAERKIDAHIQICSKRDDVYRVVKAFAARGEWINSEAKCYIQYLVGDFEQNGLNLTSMKREEIERLRQQIDSLSLQYIQNLNDDCSFLLFNEAELAGLPEEILKNLTISKNGKFKLPMKSHHIAVVLEHCKVGTTRRMVAAAYGRRSGEVNLSVLENLVQLRHKLARLLGYSNYADYAVDHRMAKTPSKVFEFLENISTSLTDLASRELATLKELKKNEEGDFPFGMEDLLYYVKKVEEQHLNMDFVALKQYFPIRLVLSGVFKIVQDLFGLRLEEVTDAEVWHSDVTLFSVFDLNSGELMGYFYLDMYTRFGKYGHTCVVALQNSALCYNGARQIPVALLIAQFHKDVDERPGLLRFSEVVNLLHEFGHVVQHICNRASFVRFSGLRVDPDFVEIPSQMLENWCYESLSLKLLSGFHQDITKPIKDETCESLKRWRYSFSALKLKQEILYCLFDQIIHSSDNIDIVELFKHLHPKQLHLVALLQVMLGLPMLEGASPASCFPRSAIGYEAACYSRIWSEVFASDIFVSKFRDGLLSQHVGMQFRNKVLAPGGAKEPIEVLKDFLGREPSIHTFVAIKSEYGF 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4334099 4340890 + BLOR00374 Blo01g00374 54814

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00374 716 Gene3D Collagenase (Catalytic Domain) 387 537 IPR024079 GO:0008237
Blo01g00374 716 Gene3D Endopeptidase. Chain P; domain 1 38 180 IPR024080 -
Blo01g00374 716 Gene3D Neurolysin, domain 3 193 707 IPR024077 -
Blo01g00374 716 PANTHER PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED 46 711 IPR045090 GO:0004222|GO:0006508
Blo01g00374 716 Coils Coil 189 209 - -
Blo01g00374 716 CDD M3A_TOP 68 707 - -
Blo01g00374 716 Pfam Peptidase family M3 260 708 IPR001567 GO:0004222|GO:0006508
Blo01g00374 716 PANTHER SACCHAROLYSIN 46 711 - -
Blo01g00374 716 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 59 708 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00374 K01392 THOP1; thimet oligopeptidase [EC:3.4.24.15] - qsu:112015579 1046.57
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00374 Blo-Chr1:4334099 Blo04g01113 Blo-Chr4:17659232 2.06E-60 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1134 Blo01g00374 . Bda01g02194 . Bpe13g00518 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0720 . . . . . . . . . . . Bma01g00026 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g00374 Blo_Chr01 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0