Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g00391 ATGAAGCGACGTGAGAGCATGGGTAGAAACAGCTTCATGAAATTGGAAATGCTTTTTCTGGGTTTACTGGTTTTGTCTCTGATAGAGTTGTCTTCTGCAACCTTATCTCCTTCTGGTATCAACTATGAAGTTGTAGCTTTGATGTCCATAAAAAATGATCTAATTGATCCACATAATGTTCTGGAAAATTGGGACATTAACTCGGTGGATCCTTGTAGCTGGAGGATGATTACTTGCTCCCCTGATGGGCATGTATCAGCTTTGGGGCTGCCCTGTCAGAGCTTGTCTGGTACTTTATCTTCTGGAATTGGAAATCTTAGTAATCTGCAGTATTTGCTGCTTCAGAATAATGCCATTTCAGGTCCGATTCCATTTACCATCGGCAAGTTGGAGAAGCTTCAGACTCTCGATCTCTCGAGCAATGCGTTCACCGGTGAAATACCGAGTTCTTTGGGGGACCTAAAGAACCTAAATTATTTAATTATAGGTAACCCTCTAATTTGCGGGCCAAACAACTGTTCTGGAGTGTATCCAGAGCCACTGTCATTCGCCCCTGACTCCCTGAAAGGTGAGTCAGAATCCCGAACGAAAAGTCATCGCATTGCTGTGGCTTTCGCAGCTAGTTTCAGTGCTGCCTTTGTTTTCGTAGTGCTTATTGGGCTGCTGGTTTGGTGGCGATACAGACGCAACCAGCAAATTTTCTTTGATGTTCATGATCAATATGACCCAGAGGTTTGCTTAGGCCATCTGCGAAGGTATACGTTTAAGGAGCTCCGAGCAGCCACTGATCATTTTAACCCAAAGAACATTTTGGGGAGAGGGGGATTTGGAATTGTGTACAAGGGAAGCTTGAATGATGGAACTCTTGTTGCTGTTAAACGATTGAAAGACTACAATGCGGCTGGCGGGGAAATACAGTTTCAGACCGAAGTAGAGATGATAAGTTTAGCAGTTCATAGAAATCTTCTCAGATTATGCGGGTTTTGTTCGAATGAGAACGAGCGCCTCCTTGTTTATCCCTACATGCCTAACGGAAGTGTTGCCTCCCGGTTGAGAGATCGTGTTCATGGTTGTCCGGCTCTGGACTGGGGGATACGCAAGAGGATAGCTTTAGGCACTGCAAGAGGGTTGGTCTATTTACACGAGCAATGTGACCCGAAAATTATCCACCGCGATGTAAAAGCAGCTAACATATTGCTAGATGAAGACTTTGAGGCTGTGGTTGGAGATTTTGGGTTGGCCAAGCTCTTAGATCACAGAGATTCTCATGTAACCACTGCAGTTCGAGGAACTGTTGGCCACATAGCCCCGGAGTACTTATCGACCGGCCAATCGTCGGAAAAAACTGATGTCTTTGGCTTTGGAATATTACTTCTCGAGCTCATAACTGGTCAAAAAGCTTTGGATTTTGGACGAGCAGCTAATCAGAAGGGCATAATGCTTGACTGGGTGAGGAAGCTCCATCTAGAGGGAAAGCTAAATGTGATGGTGGACAAGGATCTAAAGAACAACTACGACAGAATCGAATTGGAAGAGATGGTCCAAGTGGCATTGTTGTGTACCCAGTTTAATCCTCTGCACCGGCCAAAAATGTCGGAAGTATTGAAGATGTTGGAAGGAGATGGGTTGGCTGAAAAATGGGAGGCATCTCAGCAGGTGGAGACACCTCGATTCCGATGCAACGAACGCCCTCAGAGGTATTCAGATTACGTCGATGAATCTTCGTTGGTAGTAGAGGCAATGGAGCTCTCGGGTCCGAGGTGA 1764 45.52 MKRRESMGRNSFMKLEMLFLGLLVLSLIELSSATLSPSGINYEVVALMSIKNDLIDPHNVLENWDINSVDPCSWRMITCSPDGHVSALGLPCQSLSGTLSSGIGNLSNLQYLLLQNNAISGPIPFTIGKLEKLQTLDLSSNAFTGEIPSSLGDLKNLNYLIIGNPLICGPNNCSGVYPEPLSFAPDSLKGESESRTKSHRIAVAFAASFSAAFVFVVLIGLLVWWRYRRNQQIFFDVHDQYDPEVCLGHLRRYTFKELRAATDHFNPKNILGRGGFGIVYKGSLNDGTLVAVKRLKDYNAAGGEIQFQTEVEMISLAVHRNLLRLCGFCSNENERLLVYPYMPNGSVASRLRDRVHGCPALDWGIRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDFGRAANQKGIMLDWVRKLHLEGKLNVMVDKDLKNNYDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAEKWEASQQVETPRFRCNERPQRYSDYVDESSLVVEAMELSGPR 587
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 4427087 4430465 - BLOR00391 Blo01g00391 54831
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo01g00391 587 Gene3D Transferase(Phosphotransferase) domain 1 342 557 - -
Blo01g00391 587 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 160 - -
Blo01g00391 587 SUPERFAMILY L domain-like 41 169 - -
Blo01g00391 587 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 159 587 - -
Blo01g00391 587 PANTHER PROTEIN NSP-INTERACTING KINASE 3 16 160 - -
Blo01g00391 587 PANTHER PROTEIN NSP-INTERACTING KINASE 3 159 587 - -
Blo01g00391 587 Pfam Leucine rich repeat 107 162 IPR001611 GO:0005515
Blo01g00391 587 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Blo01g00391 587 ProSitePatterns Protein kinases ATP-binding region signature. 271 293 IPR017441 GO:0005524
Blo01g00391 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 388 400 IPR008271 GO:0004672|GO:0006468
Blo01g00391 587 ProSiteProfiles Protein kinase domain profile. 265 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00391 587 SMART serkin_6 265 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00391 587 Gene3D Phosphorylase Kinase; domain 1 234 341 - -
Blo01g00391 587 SUPERFAMILY Protein kinase-like (PK-like) 241 539 IPR011009 -
Blo01g00391 587 Pfam Protein kinase domain 267 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g00391 587 Gene3D Ribonuclease Inhibitor 39 189 IPR032675 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00391 Blo-Chr1:4427087 Blo01g00467 Blo-Chr1:5178225 0 dispersed
Blo04g00930 Blo-Chr4:10992539 Blo01g00391 Blo-Chr1:4427087 0 transposed
Blo11g00335 Blo-Chr11:2786393 Blo01g00391 Blo-Chr1:4427087 0 transposed
Blo15g00781 Blo-Chr15:26671223 Blo01g00391 Blo-Chr1:4427087 0 transposed
Blo01g00391 Blo-Chr1:4427087 Blo16g01164 Blo-Chr16:40180205 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84077 PF00069 Pkinase 5.10E-43 CL0016 Blo PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g00391 - - csv:101208885 931.398